EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCVAG00000020672 (Gene tree)
Gene ID: 107105190
Gene Symbol: -
Alias: -
Full Name: G-patch domain and ankyrin repeats 1
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Minus strand
Length: 6092 bases
Position: chrKL654632.1:14784-20875
Accession: 107105190
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000031426	G-patch	PF01585.23	1.1e-12	1	1
ENSCVAP00000017545	G-patch	PF01585.23	1.7e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000026244	-	1609	XM_015405313	ENSCVAP00000017545	355 (aa)	XP_015260799	UPI0007424FEB
ENSCVAT00000032358	-	1074	-	ENSCVAP00000031426	357 (aa)	-	-
ENSCVAT00000026241	-	645	-	ENSCVAP00000017537	214 (aa)	-	-

Gene Model

Click here to download ENSCVAG00000020672's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000020672's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000020672	-	98	36.111	ENSG00000204438	GPANK1	98	35.422	Homo_sapiens
ENSCVAG00000020672	-	99	55.556	ENSAPOG00000014355	-	99	56.354	Acanthochromis_polyacanthus
ENSCVAG00000020672	-	99	55.556	ENSAPOG00000010685	-	99	56.354	Acanthochromis_polyacanthus
ENSCVAG00000020672	-	90	35.542	ENSAMEG00000009290	GPANK1	84	34.971	Ailuropoda_melanoleuca
ENSCVAG00000020672	-	99	64.228	ENSAOCG00000024034	GPANK1	99	64.228	Amphiprion_ocellaris
ENSCVAG00000020672	-	99	64.835	ENSAPEG00000000530	GPANK1	99	64.835	Amphiprion_percula
ENSCVAG00000020672	-	98	59.885	ENSATEG00000008243	-	97	59.599	Anabas_testudineus
ENSCVAG00000020672	-	91	35.045	ENSANAG00000026356	GPANK1	92	35.447	Aotus_nancymaae
ENSCVAG00000020672	-	99	55.679	ENSACLG00000001320	GPANK1	99	57.184	Astatotilapia_calliptera
ENSCVAG00000020672	-	99	46.537	ENSAMXG00000012581	-	86	46.260	Astyanax_mexicanus
ENSCVAG00000020672	-	98	35.083	ENSBTAG00000008835	GPANK1	98	33.245	Bos_taurus
ENSCVAG00000020672	-	68	31.600	WBGene00014256	ZK1320.7	64	31.557	Caenorhabditis_elegans
ENSCVAG00000020672	-	91	37.462	ENSCJAG00000003002	GPANK1	98	34.795	Callithrix_jacchus
ENSCVAG00000020672	-	90	35.843	ENSCAFG00000000601	GPANK1	90	33.929	Canis_familiaris
ENSCVAG00000020672	-	90	35.843	ENSCAFG00020020706	GPANK1	90	33.929	Canis_lupus_dingo
ENSCVAG00000020672	-	90	37.126	ENSCHIG00000024637	GPANK1	90	35.417	Capra_hircus
ENSCVAG00000020672	-	89	32.249	ENSTSYG00000028288	GPANK1	90	32.440	Carlito_syrichta
ENSCVAG00000020672	-	98	34.903	ENSCAPG00000005661	GPANK1	93	33.425	Cavia_aperea
ENSCVAG00000020672	-	98	34.626	ENSCPOG00000031872	GPANK1	98	33.425	Cavia_porcellus
ENSCVAG00000020672	-	91	35.952	ENSCCAG00000019583	GPANK1	90	36.578	Cebus_capucinus
ENSCVAG00000020672	-	91	36.527	ENSCATG00000036761	GPANK1	98	35.714	Cercocebus_atys
ENSCVAG00000020672	-	90	37.349	ENSCLAG00000014639	GPANK1	89	36.012	Chinchilla_lanigera
ENSCVAG00000020672	-	91	38.323	ENSCSAG00000008570	GPANK1	98	35.714	Chlorocebus_sabaeus
ENSCVAG00000020672	-	68	45.344	ENSCPBG00000014706	GPANK1	72	43.320	Chrysemys_picta_bellii
ENSCVAG00000020672	-	91	37.725	ENSCANG00000038862	GPANK1	98	34.341	Colobus_angolensis_palliatus
ENSCVAG00000020672	-	98	33.425	ENSCGRG00001007828	Gpank1	95	31.481	Cricetulus_griseus_chok1gshd
ENSCVAG00000020672	-	98	33.425	ENSCGRG00000014676	Gpank1	98	31.481	Cricetulus_griseus_crigri
ENSCVAG00000020672	-	69	51.793	ENSDARG00000053995	gpank1	91	44.545	Danio_rerio
ENSCVAG00000020672	-	90	37.910	ENSDNOG00000018727	GPANK1	98	34.605	Dasypus_novemcinctus
ENSCVAG00000020672	-	90	34.650	ENSDORG00000024662	Gpank1	90	32.738	Dipodomys_ordii
ENSCVAG00000020672	-	90	33.735	ENSETEG00000015166	GPANK1	92	33.526	Echinops_telfairi
ENSCVAG00000020672	-	90	35.629	ENSEASG00005016313	GPANK1	90	33.815	Equus_asinus_asinus
ENSCVAG00000020672	-	90	36.364	ENSECAG00000019093	GPANK1	90	33.815	Equus_caballus
ENSCVAG00000020672	-	88	42.382	ENSELUG00000009653	-	93	39.683	Esox_lucius
ENSCVAG00000020672	-	90	37.048	ENSFCAG00000023899	GPANK1	90	35.260	Felis_catus
ENSCVAG00000020672	-	90	35.928	ENSFDAG00000018857	GPANK1	98	33.333	Fukomys_damarensis
ENSCVAG00000020672	-	99	71.031	ENSFHEG00000013343	-	99	70.278	Fundulus_heteroclitus
ENSCVAG00000020672	-	99	52.793	ENSGMOG00000007797	GPANK1	99	52.793	Gadus_morhua
ENSCVAG00000020672	-	100	72.853	ENSGAFG00000012817	-	100	72.853	Gambusia_affinis
ENSCVAG00000020672	-	99	61.838	ENSGACG00000016703	-	99	62.674	Gasterosteus_aculeatus
ENSCVAG00000020672	-	68	46.154	ENSGAGG00000011085	GPANK1	87	36.499	Gopherus_agassizii
ENSCVAG00000020672	-	98	36.111	ENSGGOG00000005539	GPANK1	98	35.695	Gorilla_gorilla
ENSCVAG00000020672	-	99	61.864	ENSHBUG00000018924	-	99	62.147	Haplochromis_burtoni
ENSCVAG00000020672	-	90	36.364	ENSHGLG00000011853	GPANK1	97	32.970	Heterocephalus_glaber_female
ENSCVAG00000020672	-	90	35.758	ENSHGLG00100018021	GPANK1	98	33.243	Heterocephalus_glaber_male
ENSCVAG00000020672	-	99	55.402	ENSHCOG00000000542	-	99	55.738	Hippocampus_comes
ENSCVAG00000020672	-	97	32.240	ENSSTOG00000024202	GPANK1	90	32.558	Ictidomys_tridecemlineatus
ENSCVAG00000020672	-	98	35.754	ENSJJAG00000015387	Gpank1	98	33.515	Jaculus_jaculus
ENSCVAG00000020672	-	98	48.378	ENSLBEG00000006109	-	97	52.646	Labrus_bergylta
ENSCVAG00000020672	-	99	53.803	ENSLBEG00000006075	-	89	55.491	Labrus_bergylta
ENSCVAG00000020672	-	89	51.104	ENSLBEG00000005751	GPANK1	98	53.821	Labrus_bergylta
ENSCVAG00000020672	-	91	36.467	ENSLACG00000008055	GPANK1	72	42.085	Latimeria_chalumnae
ENSCVAG00000020672	-	86	47.078	ENSLOCG00000008972	GPANK1	90	45.921	Lepisosteus_oculatus
ENSCVAG00000020672	-	90	34.940	ENSLAFG00000009499	GPANK1	92	33.151	Loxodonta_africana
ENSCVAG00000020672	-	91	36.310	ENSMFAG00000037562	GPANK1	98	35.714	Macaca_fascicularis
ENSCVAG00000020672	-	91	36.012	ENSMNEG00000040965	GPANK1	98	35.440	Macaca_nemestrina
ENSCVAG00000020672	-	91	36.527	ENSMLEG00000034247	GPANK1	98	35.714	Mandrillus_leucophaeus
ENSCVAG00000020672	-	99	62.125	ENSMAMG00000008470	-	99	61.580	Mastacembelus_armatus
ENSCVAG00000020672	-	99	61.798	ENSMZEG00005012135	GPANK1	99	61.798	Maylandia_zebra
ENSCVAG00000020672	-	90	35.241	ENSMAUG00000014293	Gpank1	98	31.148	Mesocricetus_auratus
ENSCVAG00000020672	-	89	36.578	ENSMICG00000037690	GPANK1	98	33.791	Microcebus_murinus
ENSCVAG00000020672	-	98	35.556	ENSMOCG00000000141	Gpank1	98	33.425	Microtus_ochrogaster
ENSCVAG00000020672	-	99	57.618	ENSMMOG00000003606	-	97	58.974	Mola_mola
ENSCVAG00000020672	-	71	39.768	ENSMODG00000015291	GPANK1	98	34.667	Monodelphis_domestica
ENSCVAG00000020672	-	78	69.965	ENSMALG00000002757	-	87	69.965	Monopterus_albus
ENSCVAG00000020672	-	98	36.188	MGP_CAROLIEiJ_G0021506	Gpank1	98	34.153	Mus_caroli
ENSCVAG00000020672	-	97	35.833	ENSMUSG00000092417	Gpank1	97	34.066	Mus_musculus
ENSCVAG00000020672	-	98	35.097	MGP_PahariEiJ_G0020501	Gpank1	98	34.060	Mus_pahari
ENSCVAG00000020672	-	97	35.112	MGP_SPRETEiJ_G0022411	Gpank1	97	33.791	Mus_spretus
ENSCVAG00000020672	-	68	39.919	ENSMPUG00000011149	GPANK1	90	34.682	Mustela_putorius_furo
ENSCVAG00000020672	-	98	35.000	ENSMLUG00000009408	GPANK1	92	32.800	Myotis_lucifugus
ENSCVAG00000020672	-	91	38.623	ENSNLEG00000006201	GPANK1	98	34.795	Nomascus_leucogenys
ENSCVAG00000020672	-	67	38.281	ENSMEUG00000004082	GPANK1	91	35.015	Notamacropus_eugenii
ENSCVAG00000020672	-	91	36.310	ENSOPRG00000012134	GPANK1	91	34.706	Ochotona_princeps
ENSCVAG00000020672	-	90	36.145	ENSODEG00000017947	GPANK1	90	35.294	Octodon_degus
ENSCVAG00000020672	-	90	35.191	ENSOCUG00000021491	GPANK1	90	35.207	Oryctolagus_cuniculus
ENSCVAG00000020672	-	99	59.053	ENSORLG00000009014	-	99	59.053	Oryzias_latipes
ENSCVAG00000020672	-	99	58.611	ENSORLG00020012082	-	99	58.611	Oryzias_latipes_hni
ENSCVAG00000020672	-	99	59.053	ENSORLG00015011561	-	99	59.444	Oryzias_latipes_hsok
ENSCVAG00000020672	-	90	36.747	ENSOGAG00000010276	GPANK1	89	35.650	Otolemur_garnettii
ENSCVAG00000020672	-	90	37.126	ENSOARG00000006913	GPANK1	87	35.417	Ovis_aries
ENSCVAG00000020672	-	98	36.389	ENSPPAG00000035166	GPANK1	98	35.616	Pan_paniscus
ENSCVAG00000020672	-	90	36.364	ENSPPRG00000001737	GPANK1	90	34.682	Panthera_pardus
ENSCVAG00000020672	-	90	36.364	ENSPTIG00000014920	GPANK1	90	34.682	Panthera_tigris_altaica
ENSCVAG00000020672	-	98	36.111	ENSPTRG00000017973	GPANK1	98	35.342	Pan_troglodytes
ENSCVAG00000020672	-	91	36.527	ENSPANG00000007625	GPANK1	98	35.714	Papio_anubis
ENSCVAG00000020672	-	92	44.985	ENSPKIG00000001197	GPANK1	91	45.593	Paramormyrops_kingsleyae
ENSCVAG00000020672	-	91	38.906	ENSPSIG00000006795	GPANK1	87	36.585	Pelodiscus_sinensis
ENSCVAG00000020672	-	99	47.354	ENSPMGG00000019843	-	99	47.778	Periophthalmus_magnuspinnatus
ENSCVAG00000020672	-	90	36.446	ENSPEMG00000014457	Gpank1	90	33.728	Peromyscus_maniculatus_bairdii
ENSCVAG00000020672	-	91	35.135	ENSPMAG00000010274	GPANK1	89	33.721	Petromyzon_marinus
ENSCVAG00000020672	-	98	34.595	ENSPCIG00000018505	GPANK1	99	34.748	Phascolarctos_cinereus
ENSCVAG00000020672	-	99	72.067	ENSPFOG00000009128	-	100	72.346	Poecilia_formosa
ENSCVAG00000020672	-	100	64.835	ENSPLAG00000007457	-	99	65.659	Poecilia_latipinna
ENSCVAG00000020672	-	99	72.346	ENSPMEG00000011187	-	100	72.626	Poecilia_mexicana
ENSCVAG00000020672	-	99	61.644	ENSPREG00000000043	-	99	62.295	Poecilia_reticulata
ENSCVAG00000020672	-	91	38.024	ENSPPYG00000016447	GPANK1	89	34.973	Pongo_abelii
ENSCVAG00000020672	-	75	44.118	ENSPCAG00000012850	GPANK1	80	45.098	Procavia_capensis
ENSCVAG00000020672	-	90	38.507	ENSPCOG00000017559	GPANK1	98	34.890	Propithecus_coquereli
ENSCVAG00000020672	-	99	61.582	ENSPNYG00000021711	GPANK1	99	62.147	Pundamilia_nyererei
ENSCVAG00000020672	-	68	41.667	ENSRNOG00000000848	Gpank1	90	35.103	Rattus_norvegicus
ENSCVAG00000020672	-	98	34.444	ENSRROG00000036770	GPANK1	98	35.440	Rhinopithecus_roxellana
ENSCVAG00000020672	-	98	33.611	ENSSBOG00000031598	GPANK1	98	34.783	Saimiri_boliviensis_boliviensis
ENSCVAG00000020672	-	99	44.818	ENSSFOG00015015696	gpank1	98	44.101	Scleropages_formosus
ENSCVAG00000020672	-	99	59.270	ENSSMAG00000021273	-	99	58.310	Scophthalmus_maximus
ENSCVAG00000020672	-	99	58.289	ENSSDUG00000016390	-	93	68.773	Seriola_dumerili
ENSCVAG00000020672	-	99	57.937	ENSSLDG00000022692	-	99	57.937	Seriola_lalandi_dorsalis
ENSCVAG00000020672	-	98	33.146	ENSSARG00000013203	GPANK1	65	38.559	Sorex_araneus
ENSCVAG00000020672	-	74	43.956	ENSSPUG00000017213	GPANK1	68	42.491	Sphenodon_punctatus
ENSCVAG00000020672	-	99	64.595	ENSSPAG00000023053	GPANK1	99	64.054	Stegastes_partitus
ENSCVAG00000020672	-	90	38.253	ENSSSCG00000001413	GPANK1	90	36.391	Sus_scrofa
ENSCVAG00000020672	-	99	54.875	ENSTRUG00000024606	-	99	54.875	Takifugu_rubripes
ENSCVAG00000020672	-	90	37.576	ENSTTRG00000014102	GPANK1	90	36.202	Tursiops_truncatus
ENSCVAG00000020672	-	90	35.241	ENSUAMG00000012437	GPANK1	90	34.682	Ursus_americanus
ENSCVAG00000020672	-	90	35.241	ENSUMAG00000014147	GPANK1	90	34.682	Ursus_maritimus
ENSCVAG00000020672	-	98	34.454	ENSVPAG00000002989	GPANK1	98	33.245	Vicugna_pacos
ENSCVAG00000020672	-	90	35.241	ENSVVUG00000020893	GPANK1	90	33.526	Vulpes_vulpes
ENSCVAG00000020672	-	99	35.457	ENSXETG00000002509	gpank1	99	34.417	Xenopus_tropicalis
ENSCVAG00000020672	-	99	62.011	ENSXCOG00000005699	-	95	62.011	Xiphophorus_couchianus
ENSCVAG00000020672	-	100	72.652	ENSXMAG00000026046	-	100	72.928	Xiphophorus_maculatus