EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCVAG00000020734 (Gene tree)
Gene ID: 107089705
Gene Symbol: rbm8a
Alias: fb34f03|wu:fb34f03|zgc:110525
Full Name: RNA binding motif protein 8A
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Minus strand
Length: 11691 bases
Position: chrKL652500.1:95144-106834
Accession: 107089705
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000017618	RRM_1	PF00076.22	5.3e-20	1	1
ENSCVAP00000017618	RRM_3	PF08777.11	4.7e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000032383	-	959	XM_015383043	ENSCVAP00000017618	173 (aa)	XP_015238529	UPI00074255C6

Gene Model

Click here to download ENSCVAG00000020734's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000020734's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCVAG00000020734	rbm8a	54	30.667	ENSCVAG00000017170	elavl1a	76	30.667
ENSCVAG00000020734	rbm8a	62	36.000	ENSCVAG00000013913	ELAVL2	62	36.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000020734	rbm8a	86	90.066	ENSG00000265241	RBM8A	91	89.873	Homo_sapiens
ENSCVAG00000020734	rbm8a	90	94.937	ENSAPOG00000009727	rbm8a	90	94.937	Acanthochromis_polyacanthus
ENSCVAG00000020734	rbm8a	86	88.312	ENSAMEG00000017623	RBM8A	91	88.199	Ailuropoda_melanoleuca
ENSCVAG00000020734	rbm8a	91	95.625	ENSACIG00000017678	rbm8a	100	95.625	Amphilophus_citrinellus
ENSCVAG00000020734	rbm8a	90	94.937	ENSAOCG00000023887	rbm8a	76	94.937	Amphiprion_ocellaris
ENSCVAG00000020734	rbm8a	90	94.937	ENSAPEG00000022847	rbm8a	76	94.937	Amphiprion_percula
ENSCVAG00000020734	rbm8a	90	94.937	ENSATEG00000005630	rbm8a	90	94.937	Anabas_testudineus
ENSCVAG00000020734	rbm8a	86	90.066	ENSANAG00000004525	RBM8A	91	89.873	Aotus_nancymaae
ENSCVAG00000020734	rbm8a	90	94.304	ENSACLG00000009627	rbm8a	90	94.304	Astatotilapia_calliptera
ENSCVAG00000020734	rbm8a	86	92.715	ENSAMXG00000040754	rbm8a	91	92.405	Astyanax_mexicanus
ENSCVAG00000020734	rbm8a	75	57.252	WBGene00004387	rnp-4	85	60.331	Caenorhabditis_elegans
ENSCVAG00000020734	rbm8a	86	90.066	ENSCJAG00000046869	RBM8A	91	89.873	Callithrix_jacchus
ENSCVAG00000020734	rbm8a	86	90.066	ENSCAFG00000023172	RBM8A	91	89.873	Canis_familiaris
ENSCVAG00000020734	rbm8a	86	90.066	ENSCAFG00020019945	RBM8A	91	89.873	Canis_lupus_dingo
ENSCVAG00000020734	rbm8a	86	90.066	ENSCHIG00000012114	RBM8A	91	89.873	Capra_hircus
ENSCVAG00000020734	rbm8a	86	90.066	ENSTSYG00000028809	RBM8A	91	89.873	Carlito_syrichta
ENSCVAG00000020734	rbm8a	64	90.090	ENSCAPG00000014086	RBM8A	88	90.741	Cavia_aperea
ENSCVAG00000020734	rbm8a	90	89.873	ENSCPOG00000022453	RBM8A	94	89.873	Cavia_porcellus
ENSCVAG00000020734	rbm8a	86	90.066	ENSCCAG00000028589	-	91	89.873	Cebus_capucinus
ENSCVAG00000020734	rbm8a	86	89.404	ENSCCAG00000022460	-	91	89.241	Cebus_capucinus
ENSCVAG00000020734	rbm8a	86	90.066	ENSCATG00000021691	RBM8A	91	89.873	Cercocebus_atys
ENSCVAG00000020734	rbm8a	86	90.066	ENSCLAG00000000547	RBM8A	91	89.873	Chinchilla_lanigera
ENSCVAG00000020734	rbm8a	86	90.066	ENSCSAG00000001779	RBM8A	91	89.873	Chlorocebus_sabaeus
ENSCVAG00000020734	rbm8a	86	90.066	ENSCPBG00000007941	RBM8A	73	89.873	Chrysemys_picta_bellii
ENSCVAG00000020734	rbm8a	90	64.103	ENSCING00000004877	-	93	64.103	Ciona_intestinalis
ENSCVAG00000020734	rbm8a	88	65.359	ENSCSAVG00000005685	-	93	64.744	Ciona_savignyi
ENSCVAG00000020734	rbm8a	86	90.066	ENSCANG00000042182	RBM8A	91	89.873	Colobus_angolensis_palliatus
ENSCVAG00000020734	rbm8a	88	76.129	ENSCGRG00001003032	-	91	75.949	Cricetulus_griseus_chok1gshd
ENSCVAG00000020734	rbm8a	86	90.066	ENSCGRG00001002681	-	91	89.873	Cricetulus_griseus_chok1gshd
ENSCVAG00000020734	rbm8a	86	90.066	ENSCGRG00000006832	-	91	89.873	Cricetulus_griseus_crigri
ENSCVAG00000020734	rbm8a	90	94.304	ENSCSEG00000011865	rbm8a	90	94.304	Cynoglossus_semilaevis
ENSCVAG00000020734	rbm8a	88	93.548	ENSDARG00000016516	rbm8a	91	93.038	Danio_rerio
ENSCVAG00000020734	rbm8a	53	85.714	ENSDNOG00000025265	-	100	85.714	Dasypus_novemcinctus
ENSCVAG00000020734	rbm8a	86	90.066	ENSDORG00000027340	-	99	83.432	Dipodomys_ordii
ENSCVAG00000020734	rbm8a	94	61.310	FBgn0033378	tsu	96	62.733	Drosophila_melanogaster
ENSCVAG00000020734	rbm8a	88	75.484	ENSETEG00000017932	-	91	75.316	Echinops_telfairi
ENSCVAG00000020734	rbm8a	82	85.417	ENSETEG00000008411	-	82	85.417	Echinops_telfairi
ENSCVAG00000020734	rbm8a	90	81.529	ENSEBUG00000010386	rbm8a	90	81.529	Eptatretus_burgeri
ENSCVAG00000020734	rbm8a	86	90.066	ENSEASG00005007455	RBM8A	91	89.873	Equus_asinus_asinus
ENSCVAG00000020734	rbm8a	86	90.066	ENSECAG00000022024	RBM8A	91	89.873	Equus_caballus
ENSCVAG00000020734	rbm8a	86	61.589	ENSEEUG00000008823	RBM8A	91	62.658	Erinaceus_europaeus
ENSCVAG00000020734	rbm8a	88	90.968	ENSELUG00000012464	rbm8a	90	90.506	Esox_lucius
ENSCVAG00000020734	rbm8a	86	89.404	ENSFCAG00000033936	RBM8A	91	89.241	Felis_catus
ENSCVAG00000020734	rbm8a	86	90.066	ENSFDAG00000020821	RBM8A	91	89.873	Fukomys_damarensis
ENSCVAG00000020734	rbm8a	100	99.422	ENSFHEG00000013538	rbm8a	100	99.422	Fundulus_heteroclitus
ENSCVAG00000020734	rbm8a	81	92.143	ENSGMOG00000007353	rbm8a	89	92.143	Gadus_morhua
ENSCVAG00000020734	rbm8a	86	78.523	ENSGALG00000036283	RBM8A	90	78.846	Gallus_gallus
ENSCVAG00000020734	rbm8a	100	97.714	ENSGAFG00000021698	rbm8a	100	97.714	Gambusia_affinis
ENSCVAG00000020734	rbm8a	81	94.286	ENSGACG00000013157	rbm8a	89	94.286	Gasterosteus_aculeatus
ENSCVAG00000020734	rbm8a	86	90.066	ENSGAGG00000023769	RBM8A	91	89.873	Gopherus_agassizii
ENSCVAG00000020734	rbm8a	86	90.066	ENSGGOG00000037248	RBM8A	91	89.873	Gorilla_gorilla
ENSCVAG00000020734	rbm8a	91	94.375	ENSHBUG00000008827	rbm8a	99	94.304	Haplochromis_burtoni
ENSCVAG00000020734	rbm8a	86	90.066	ENSHGLG00000007303	RBM8A	91	89.873	Heterocephalus_glaber_female
ENSCVAG00000020734	rbm8a	86	90.066	ENSHGLG00100012468	RBM8A	91	89.873	Heterocephalus_glaber_male
ENSCVAG00000020734	rbm8a	89	94.156	ENSHCOG00000010122	rbm8a	90	92.949	Hippocampus_comes
ENSCVAG00000020734	rbm8a	88	92.258	ENSIPUG00000006525	rbm8a	81	91.772	Ictalurus_punctatus
ENSCVAG00000020734	rbm8a	86	90.066	ENSSTOG00000013917	RBM8A	91	89.873	Ictidomys_tridecemlineatus
ENSCVAG00000020734	rbm8a	86	90.066	ENSJJAG00000009488	-	91	89.873	Jaculus_jaculus
ENSCVAG00000020734	rbm8a	100	97.714	ENSKMAG00000014454	rbm8a	100	97.714	Kryptolebias_marmoratus
ENSCVAG00000020734	rbm8a	90	94.304	ENSLBEG00000015720	rbm8a	90	94.304	Labrus_bergylta
ENSCVAG00000020734	rbm8a	88	89.172	ENSLACG00000014365	RBM8A	91	88.750	Latimeria_chalumnae
ENSCVAG00000020734	rbm8a	88	93.548	ENSLOCG00000009082	rbm8a	91	93.038	Lepisosteus_oculatus
ENSCVAG00000020734	rbm8a	88	90.323	ENSLAFG00000021886	-	91	89.873	Loxodonta_africana
ENSCVAG00000020734	rbm8a	99	64.045	ENSLAFG00000011031	-	91	63.354	Loxodonta_africana
ENSCVAG00000020734	rbm8a	86	90.066	ENSMFAG00000045376	RBM8A	91	89.873	Macaca_fascicularis
ENSCVAG00000020734	rbm8a	91	85.629	ENSMMUG00000016051	RBM8A	99	85.455	Macaca_mulatta
ENSCVAG00000020734	rbm8a	86	90.066	ENSMNEG00000040422	RBM8A	91	89.873	Macaca_nemestrina
ENSCVAG00000020734	rbm8a	86	90.066	ENSMLEG00000039155	RBM8A	91	89.873	Mandrillus_leucophaeus
ENSCVAG00000020734	rbm8a	90	92.405	ENSMAMG00000010565	rbm8a	90	92.405	Mastacembelus_armatus
ENSCVAG00000020734	rbm8a	90	94.304	ENSMZEG00005016453	rbm8a	90	94.304	Maylandia_zebra
ENSCVAG00000020734	rbm8a	86	90.066	ENSMAUG00000016783	-	99	83.929	Mesocricetus_auratus
ENSCVAG00000020734	rbm8a	86	90.066	ENSMICG00000031698	-	91	89.873	Microcebus_murinus
ENSCVAG00000020734	rbm8a	91	73.125	ENSMICG00000037163	-	97	73.248	Microcebus_murinus
ENSCVAG00000020734	rbm8a	86	90.066	ENSMOCG00000017782	-	91	89.873	Microtus_ochrogaster
ENSCVAG00000020734	rbm8a	91	83.544	ENSMMOG00000017179	rbm8a	93	83.333	Mola_mola
ENSCVAG00000020734	rbm8a	86	89.404	ENSMODG00000018752	RBM8A	91	89.241	Monodelphis_domestica
ENSCVAG00000020734	rbm8a	90	91.772	ENSMALG00000010145	rbm8a	90	91.772	Monopterus_albus
ENSCVAG00000020734	rbm8a	86	90.066	MGP_CAROLIEiJ_G0025383	Rbm8a	99	83.432	Mus_caroli
ENSCVAG00000020734	rbm8a	86	87.417	MGP_CAROLIEiJ_G0014951	Rbm8a2	91	87.342	Mus_caroli
ENSCVAG00000020734	rbm8a	86	88.079	ENSMUSG00000078184	Rbm8a2	91	87.975	Mus_musculus
ENSCVAG00000020734	rbm8a	86	90.066	ENSMUSG00000038374	Rbm8a	99	83.432	Mus_musculus
ENSCVAG00000020734	rbm8a	86	90.066	MGP_PahariEiJ_G0026828	-	99	83.432	Mus_pahari
ENSCVAG00000020734	rbm8a	86	90.066	MGP_SPRETEiJ_G0026330	Rbm8a	99	83.432	Mus_spretus
ENSCVAG00000020734	rbm8a	86	90.066	ENSMPUG00000000775	RBM8A	91	89.873	Mustela_putorius_furo
ENSCVAG00000020734	rbm8a	86	90.066	ENSMLUG00000017436	-	91	89.873	Myotis_lucifugus
ENSCVAG00000020734	rbm8a	86	83.893	ENSMLUG00000022711	-	90	83.974	Myotis_lucifugus
ENSCVAG00000020734	rbm8a	88	90.323	ENSNGAG00000016038	-	91	89.873	Nannospalax_galili
ENSCVAG00000020734	rbm8a	90	94.304	ENSNBRG00000004541	rbm8a	90	94.304	Neolamprologus_brichardi
ENSCVAG00000020734	rbm8a	86	90.066	ENSNLEG00000029632	RBM8A	91	89.873	Nomascus_leucogenys
ENSCVAG00000020734	rbm8a	62	90.741	ENSMEUG00000016058	RBM8A	88	90.435	Notamacropus_eugenii
ENSCVAG00000020734	rbm8a	65	90.351	ENSOPRG00000013316	RBM8A	100	90.351	Ochotona_princeps
ENSCVAG00000020734	rbm8a	86	75.497	ENSODEG00000002094	-	90	75.949	Octodon_degus
ENSCVAG00000020734	rbm8a	86	78.146	ENSODEG00000008563	-	90	78.481	Octodon_degus
ENSCVAG00000020734	rbm8a	86	90.066	ENSODEG00000000114	-	91	89.873	Octodon_degus
ENSCVAG00000020734	rbm8a	90	94.304	ENSONIG00000008608	rbm8a	90	94.304	Oreochromis_niloticus
ENSCVAG00000020734	rbm8a	86	88.312	ENSOCUG00000025693	RBM8A	91	88.199	Oryctolagus_cuniculus
ENSCVAG00000020734	rbm8a	90	93.671	ENSORLG00000016263	rbm8a	90	93.671	Oryzias_latipes
ENSCVAG00000020734	rbm8a	91	93.750	ENSORLG00020012904	rbm8a	84	93.671	Oryzias_latipes_hni
ENSCVAG00000020734	rbm8a	90	93.671	ENSORLG00015018824	rbm8a	90	93.671	Oryzias_latipes_hsok
ENSCVAG00000020734	rbm8a	90	94.304	ENSOMEG00000021533	rbm8a	71	94.304	Oryzias_melastigma
ENSCVAG00000020734	rbm8a	86	88.312	ENSOGAG00000000202	RBM8A	91	88.199	Otolemur_garnettii
ENSCVAG00000020734	rbm8a	86	89.404	ENSOARG00000020634	RBM8A	91	89.241	Ovis_aries
ENSCVAG00000020734	rbm8a	86	90.066	ENSPPAG00000029116	RBM8A	91	89.873	Pan_paniscus
ENSCVAG00000020734	rbm8a	86	89.404	ENSPPRG00000008243	RBM8A	91	89.241	Panthera_pardus
ENSCVAG00000020734	rbm8a	86	90.066	ENSPTIG00000009472	RBM8A	91	89.873	Panthera_tigris_altaica
ENSCVAG00000020734	rbm8a	86	90.066	ENSPTRG00000001201	RBM8A	91	89.873	Pan_troglodytes
ENSCVAG00000020734	rbm8a	86	90.066	ENSPANG00000020584	RBM8A	91	89.873	Papio_anubis
ENSCVAG00000020734	rbm8a	90	91.083	ENSPKIG00000009551	rbm8a	67	90.506	Paramormyrops_kingsleyae
ENSCVAG00000020734	rbm8a	88	91.503	ENSPKIG00000020558	rbm8a	91	91.026	Paramormyrops_kingsleyae
ENSCVAG00000020734	rbm8a	90	94.937	ENSPMGG00000010122	rbm8a	90	94.937	Periophthalmus_magnuspinnatus
ENSCVAG00000020734	rbm8a	86	90.066	ENSPEMG00000018117	-	91	89.873	Peromyscus_maniculatus_bairdii
ENSCVAG00000020734	rbm8a	86	89.404	ENSPCIG00000011931	RBM8A	91	89.241	Phascolarctos_cinereus
ENSCVAG00000020734	rbm8a	100	98.286	ENSPFOG00000010695	rbm8a	100	98.286	Poecilia_formosa
ENSCVAG00000020734	rbm8a	100	98.286	ENSPLAG00000009183	rbm8a	100	98.286	Poecilia_latipinna
ENSCVAG00000020734	rbm8a	100	98.286	ENSPMEG00000013950	rbm8a	100	98.286	Poecilia_mexicana
ENSCVAG00000020734	rbm8a	91	97.500	ENSPREG00000017572	rbm8a	100	97.500	Poecilia_reticulata
ENSCVAG00000020734	rbm8a	86	90.066	ENSPPYG00000000929	RBM8A	91	89.873	Pongo_abelii
ENSCVAG00000020734	rbm8a	88	89.677	ENSPCAG00000002146	-	91	89.241	Procavia_capensis
ENSCVAG00000020734	rbm8a	86	90.066	ENSPCOG00000022886	RBM8A	91	89.873	Propithecus_coquereli
ENSCVAG00000020734	rbm8a	86	90.066	ENSPVAG00000014471	RBM8A	91	89.873	Pteropus_vampyrus
ENSCVAG00000020734	rbm8a	90	94.304	ENSPNYG00000013564	rbm8a	90	94.304	Pundamilia_nyererei
ENSCVAG00000020734	rbm8a	88	94.194	ENSPNAG00000028502	rbm8a	91	93.671	Pygocentrus_nattereri
ENSCVAG00000020734	rbm8a	86	90.066	ENSRNOG00000021215	Rbm8a	91	89.873	Rattus_norvegicus
ENSCVAG00000020734	rbm8a	86	89.404	ENSRBIG00000039233	RBM8A	91	89.241	Rhinopithecus_bieti
ENSCVAG00000020734	rbm8a	86	90.066	ENSRROG00000040324	-	91	89.873	Rhinopithecus_roxellana
ENSCVAG00000020734	rbm8a	86	84.768	ENSRROG00000033023	-	91	84.177	Rhinopithecus_roxellana
ENSCVAG00000020734	rbm8a	86	90.066	ENSSBOG00000031316	RBM8A	91	89.873	Saimiri_boliviensis_boliviensis
ENSCVAG00000020734	rbm8a	86	89.404	ENSSHAG00000018629	RBM8A	91	89.241	Sarcophilus_harrisii
ENSCVAG00000020734	rbm8a	88	92.258	ENSSFOG00015009007	rbm8a	91	91.772	Scleropages_formosus
ENSCVAG00000020734	rbm8a	88	90.323	ENSSFOG00015024171	rbm8a	91	89.873	Scleropages_formosus
ENSCVAG00000020734	rbm8a	90	93.671	ENSSMAG00000012998	rbm8a	90	93.671	Scophthalmus_maximus
ENSCVAG00000020734	rbm8a	90	94.937	ENSSDUG00000005911	rbm8a	90	94.937	Seriola_dumerili
ENSCVAG00000020734	rbm8a	90	94.937	ENSSLDG00000011664	rbm8a	90	94.937	Seriola_lalandi_dorsalis
ENSCVAG00000020734	rbm8a	86	90.066	ENSSARG00000013289	RBM8A	91	89.873	Sorex_araneus
ENSCVAG00000020734	rbm8a	86	90.728	ENSSPUG00000001576	RBM8A	91	90.506	Sphenodon_punctatus
ENSCVAG00000020734	rbm8a	90	94.937	ENSSPAG00000012181	rbm8a	90	94.937	Stegastes_partitus
ENSCVAG00000020734	rbm8a	86	90.066	ENSSSCG00000028509	RBM8A	91	89.873	Sus_scrofa
ENSCVAG00000020734	rbm8a	86	88.742	ENSTGUG00000004447	RBM8A	91	88.608	Taeniopygia_guttata
ENSCVAG00000020734	rbm8a	90	94.872	ENSTRUG00000013173	rbm8a	90	94.872	Takifugu_rubripes
ENSCVAG00000020734	rbm8a	90	91.772	ENSTNIG00000006869	rbm8a	90	91.772	Tetraodon_nigroviridis
ENSCVAG00000020734	rbm8a	65	90.351	ENSTBEG00000014947	RBM8A	100	90.351	Tupaia_belangeri
ENSCVAG00000020734	rbm8a	74	90.625	ENSTTRG00000009081	RBM8A	89	90.370	Tursiops_truncatus
ENSCVAG00000020734	rbm8a	86	90.066	ENSUAMG00000021929	RBM8A	91	89.873	Ursus_americanus
ENSCVAG00000020734	rbm8a	86	90.066	ENSUMAG00000010298	RBM8A	91	89.873	Ursus_maritimus
ENSCVAG00000020734	rbm8a	86	90.066	ENSVVUG00000007486	RBM8A	91	89.873	Vulpes_vulpes
ENSCVAG00000020734	rbm8a	100	97.714	ENSXCOG00000004369	rbm8a	100	97.714	Xiphophorus_couchianus
ENSCVAG00000020734	rbm8a	100	97.714	ENSXMAG00000013463	rbm8a	100	98.734	Xiphophorus_maculatus