EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCVAG00000020866 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Plus strand
Length: 10608 bases
Position: chrKL652513.1:1881687-1892294
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000017713	ResIII	PF04851.15	3.4e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000026464	-	1563	-	ENSCVAP00000017713	520 (aa)	-	-

Gene Model

Click here to download ENSCVAG00000020866's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000020866's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCVAG00000020866	-	73	37.531	ENSCVAG00000012049	-	65	37.531
ENSCVAG00000020866	-	72	36.961	ENSCVAG00000000159	hells	80	36.961

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000020866	-	96	60.835	ENSCSAVG00000005900	-	99	60.835	Ciona_savignyi
ENSCVAG00000020866	-	99	84.321	ENSDORG00000026018	-	96	84.321	Dipodomys_ordii
ENSCVAG00000020866	-	55	96.154	ENSFHEG00000009582	-	63	96.154	Fundulus_heteroclitus
ENSCVAG00000020866	-	97	70.414	ENSFHEG00000017596	-	94	70.414	Fundulus_heteroclitus
ENSCVAG00000020866	-	100	71.078	ENSGALG00000036191	-	100	71.078	Gallus_gallus
ENSCVAG00000020866	-	66	56.391	ENSGAFG00000015210	-	63	56.391	Gambusia_affinis
ENSCVAG00000020866	-	100	89.847	ENSHCOG00000012108	-	93	89.847	Hippocampus_comes
ENSCVAG00000020866	-	99	84.000	ENSJJAG00000010052	-	96	84.000	Jaculus_jaculus
ENSCVAG00000020866	-	99	84.190	ENSNGAG00000017135	-	96	84.190	Nannospalax_galili
ENSCVAG00000020866	-	99	84.381	ENSODEG00000015358	-	96	84.381	Octodon_degus
ENSCVAG00000020866	-	64	78.248	ENSOANG00000013276	-	100	78.248	Ornithorhynchus_anatinus
ENSCVAG00000020866	-	84	64.935	ENSPMGG00000019850	chd8	80	63.402	Periophthalmus_magnuspinnatus
ENSCVAG00000020866	-	96	96.607	ENSPMEG00000000676	-	83	96.607	Poecilia_mexicana
ENSCVAG00000020866	-	67	79.603	ENSPREG00000014744	chd7	96	65.370	Poecilia_reticulata
ENSCVAG00000020866	-	99	71.538	ENSTRUG00000006682	chd8	94	71.538	Takifugu_rubripes
ENSCVAG00000020866	-	96	90.419	ENSTRUG00000007574	-	56	90.419	Takifugu_rubripes
ENSCVAG00000020866	-	96	73.054	ENSXETG00000017194	CHD8	53	73.054	Xenopus_tropicalis