EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCVAG00000020927 (Gene tree)
Gene ID: 107095874
Gene Symbol: ddx1
Alias: si:ch211-214k9.2|si:dkey-161f12.1
Full Name: DEAD-box helicase 1
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Minus strand
Length: 8679 bases
Position: chrKL653081.1:73208-81886
Accession: 107095874
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000031487	DEAD	PF00270.29	1.3e-72	1	1
ENSCVAP00000031509	DEAD	PF00270.29	1.4e-62	1	1
ENSCVAP00000017645	DEAD	PF00270.29	3.9e-50	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000026373	-	1980	-	ENSCVAP00000017645	659 (aa)	-	-
ENSCVAT00000026407	-	2693	XM_015392236	ENSCVAP00000031487	734 (aa)	XP_015247722	-
ENSCVAT00000026405	-	2797	-	ENSCVAP00000031509	697 (aa)	-	-

Gene Model

Click here to download ENSCVAG00000020927's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000020927's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCVAG00000020927	ddx1	53	45.098	ENSCVAG00000002540	ddx6	68	45.098
ENSCVAG00000020927	ddx1	53	45.098	ENSCVAG00000011006	-	68	45.098
ENSCVAG00000020927	ddx1	60	34.667	ENSCVAG00000004044	ddx28	62	37.143

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000020927	ddx1	100	84.332	ENSG00000079785	DDX1	100	83.612	Homo_sapiens
ENSCVAG00000020927	ddx1	100	90.463	ENSAPOG00000003166	ddx1	100	90.463	Acanthochromis_polyacanthus
ENSCVAG00000020927	ddx1	100	83.696	ENSAMEG00000001071	DDX1	99	83.696	Ailuropoda_melanoleuca
ENSCVAG00000020927	ddx1	100	90.895	ENSACIG00000017422	ddx1	100	90.288	Amphilophus_citrinellus
ENSCVAG00000020927	ddx1	88	90.909	ENSAOCG00000015436	ddx1	94	91.195	Amphiprion_ocellaris
ENSCVAG00000020927	ddx1	100	91.553	ENSAPEG00000007699	ddx1	100	91.553	Amphiprion_percula
ENSCVAG00000020927	ddx1	99	91.921	ENSATEG00000003965	ddx1	98	91.921	Anabas_testudineus
ENSCVAG00000020927	ddx1	100	85.095	ENSAPLG00000011093	DDX1	99	85.095	Anas_platyrhynchos
ENSCVAG00000020927	ddx1	94	85.116	ENSACAG00000011036	DDX1	99	85.116	Anolis_carolinensis
ENSCVAG00000020927	ddx1	100	84.605	ENSANAG00000037912	DDX1	100	83.915	Aotus_nancymaae
ENSCVAG00000020927	ddx1	100	91.689	ENSACLG00000008850	ddx1	100	90.895	Astatotilapia_calliptera
ENSCVAG00000020927	ddx1	100	88.965	ENSAMXG00000002100	ddx1	99	88.965	Astyanax_mexicanus
ENSCVAG00000020927	ddx1	100	84.605	ENSBTAG00000009906	DDX1	99	84.605	Bos_taurus
ENSCVAG00000020927	ddx1	98	47.411	WBGene00021938	Y55F3BR.1	98	47.411	Caenorhabditis_elegans
ENSCVAG00000020927	ddx1	100	84.332	ENSCJAG00000007076	DDX1	100	83.612	Callithrix_jacchus
ENSCVAG00000020927	ddx1	100	84.332	ENSCAFG00000003686	DDX1	99	84.332	Canis_familiaris
ENSCVAG00000020927	ddx1	100	84.332	ENSCAFG00020026083	DDX1	99	84.332	Canis_lupus_dingo
ENSCVAG00000020927	ddx1	100	84.469	ENSCHIG00000011046	DDX1	99	84.469	Capra_hircus
ENSCVAG00000020927	ddx1	100	63.063	ENSTSYG00000037396	-	98	63.063	Carlito_syrichta
ENSCVAG00000020927	ddx1	100	84.469	ENSTSYG00000002477	-	100	83.763	Carlito_syrichta
ENSCVAG00000020927	ddx1	97	68.487	ENSCAPG00000008906	-	93	68.429	Cavia_aperea
ENSCVAG00000020927	ddx1	68	83.065	ENSCPOG00000032467	-	99	83.065	Cavia_porcellus
ENSCVAG00000020927	ddx1	98	81.776	ENSCPOG00000009816	-	96	81.776	Cavia_porcellus
ENSCVAG00000020927	ddx1	100	84.332	ENSCCAG00000030085	DDX1	100	83.612	Cebus_capucinus
ENSCVAG00000020927	ddx1	100	84.196	ENSCATG00000033924	DDX1	100	83.460	Cercocebus_atys
ENSCVAG00000020927	ddx1	100	84.196	ENSCLAG00000005434	DDX1	99	84.196	Chinchilla_lanigera
ENSCVAG00000020927	ddx1	100	84.196	ENSCSAG00000007883	DDX1	99	84.196	Chlorocebus_sabaeus
ENSCVAG00000020927	ddx1	70	87.411	ENSCHOG00000002171	DDX1	70	87.411	Choloepus_hoffmanni
ENSCVAG00000020927	ddx1	100	79.184	ENSCPBG00000013330	DDX1	99	84.578	Chrysemys_picta_bellii
ENSCVAG00000020927	ddx1	100	66.486	ENSCING00000001176	-	99	66.487	Ciona_intestinalis
ENSCVAG00000020927	ddx1	99	61.951	ENSCSAVG00000003028	-	99	61.951	Ciona_savignyi
ENSCVAG00000020927	ddx1	100	84.196	ENSCANG00000031530	DDX1	100	83.460	Colobus_angolensis_palliatus
ENSCVAG00000020927	ddx1	100	83.787	ENSCGRG00001013025	Ddx1	99	83.787	Cricetulus_griseus_chok1gshd
ENSCVAG00000020927	ddx1	100	83.787	ENSCGRG00000000676	Ddx1	99	83.787	Cricetulus_griseus_crigri
ENSCVAG00000020927	ddx1	100	92.643	ENSCSEG00000002630	ddx1	100	92.643	Cynoglossus_semilaevis
ENSCVAG00000020927	ddx1	100	86.649	ENSDARG00000032117	ddx1	100	86.649	Danio_rerio
ENSCVAG00000020927	ddx1	100	84.196	ENSDNOG00000006905	DDX1	99	84.196	Dasypus_novemcinctus
ENSCVAG00000020927	ddx1	100	84.332	ENSDORG00000012847	Ddx1	99	84.332	Dipodomys_ordii
ENSCVAG00000020927	ddx1	98	60.138	FBgn0015075	Ddx1	98	60.276	Drosophila_melanogaster
ENSCVAG00000020927	ddx1	99	78.407	ENSETEG00000014259	DDX1	99	76.294	Echinops_telfairi
ENSCVAG00000020927	ddx1	72	76.059	ENSEBUG00000009800	-	99	76.059	Eptatretus_burgeri
ENSCVAG00000020927	ddx1	100	84.060	ENSEASG00005009335	DDX1	91	84.060	Equus_asinus_asinus
ENSCVAG00000020927	ddx1	100	83.357	ENSECAG00000016396	DDX1	100	83.357	Equus_caballus
ENSCVAG00000020927	ddx1	89	82.264	ENSEEUG00000001606	DDX1	89	82.264	Erinaceus_europaeus
ENSCVAG00000020927	ddx1	100	86.667	ENSELUG00000006743	ddx1	100	86.667	Esox_lucius
ENSCVAG00000020927	ddx1	100	84.332	ENSFCAG00000004680	DDX1	99	84.332	Felis_catus
ENSCVAG00000020927	ddx1	100	85.150	ENSFALG00000008696	DDX1	99	85.150	Ficedula_albicollis
ENSCVAG00000020927	ddx1	100	83.787	ENSFDAG00000021305	DDX1	99	83.787	Fukomys_damarensis
ENSCVAG00000020927	ddx1	100	93.460	ENSFHEG00000008444	ddx1	100	93.460	Fundulus_heteroclitus
ENSCVAG00000020927	ddx1	100	86.160	ENSGMOG00000011300	ddx1	99	86.160	Gadus_morhua
ENSCVAG00000020927	ddx1	100	85.014	ENSGALG00000016461	DDX1	99	85.014	Gallus_gallus
ENSCVAG00000020927	ddx1	100	95.232	ENSGAFG00000004706	ddx1	99	95.232	Gambusia_affinis
ENSCVAG00000020927	ddx1	100	88.828	ENSGACG00000011162	ddx1	99	88.828	Gasterosteus_aculeatus
ENSCVAG00000020927	ddx1	100	85.150	ENSGAGG00000021020	DDX1	99	85.150	Gopherus_agassizii
ENSCVAG00000020927	ddx1	100	84.332	ENSGGOG00000012482	DDX1	100	83.612	Gorilla_gorilla
ENSCVAG00000020927	ddx1	100	91.553	ENSHBUG00000014069	ddx1	99	91.553	Haplochromis_burtoni
ENSCVAG00000020927	ddx1	100	83.924	ENSHGLG00000000801	DDX1	99	83.924	Heterocephalus_glaber_female
ENSCVAG00000020927	ddx1	100	83.924	ENSHGLG00100000711	DDX1	100	83.924	Heterocephalus_glaber_male
ENSCVAG00000020927	ddx1	100	90.599	ENSHCOG00000011492	ddx1	95	90.599	Hippocampus_comes
ENSCVAG00000020927	ddx1	100	86.512	ENSIPUG00000003494	ddx1	99	86.512	Ictalurus_punctatus
ENSCVAG00000020927	ddx1	100	84.469	ENSSTOG00000003977	DDX1	100	84.469	Ictidomys_tridecemlineatus
ENSCVAG00000020927	ddx1	99	79.389	ENSJJAG00000013315	Ddx1	100	79.389	Jaculus_jaculus
ENSCVAG00000020927	ddx1	100	93.597	ENSKMAG00000011340	ddx1	99	93.597	Kryptolebias_marmoratus
ENSCVAG00000020927	ddx1	100	86.212	ENSLBEG00000008692	ddx1	100	86.212	Labrus_bergylta
ENSCVAG00000020927	ddx1	100	84.196	ENSLACG00000010529	DDX1	99	84.196	Latimeria_chalumnae
ENSCVAG00000020927	ddx1	100	86.667	ENSLOCG00000016473	ddx1	99	86.667	Lepisosteus_oculatus
ENSCVAG00000020927	ddx1	100	84.741	ENSLAFG00000002213	DDX1	99	84.741	Loxodonta_africana
ENSCVAG00000020927	ddx1	100	84.196	ENSMFAG00000033987	DDX1	100	83.460	Macaca_fascicularis
ENSCVAG00000020927	ddx1	100	84.196	ENSMMUG00000023437	DDX1	100	83.460	Macaca_mulatta
ENSCVAG00000020927	ddx1	100	84.196	ENSMNEG00000029189	DDX1	100	83.460	Macaca_nemestrina
ENSCVAG00000020927	ddx1	100	84.060	ENSMLEG00000030787	DDX1	100	83.308	Mandrillus_leucophaeus
ENSCVAG00000020927	ddx1	100	92.371	ENSMAMG00000015916	ddx1	99	92.371	Mastacembelus_armatus
ENSCVAG00000020927	ddx1	100	91.689	ENSMZEG00005015207	ddx1	100	90.895	Maylandia_zebra
ENSCVAG00000020927	ddx1	100	81.165	ENSMGAG00000014025	DDX1	100	81.165	Meleagris_gallopavo
ENSCVAG00000020927	ddx1	64	97.959	ENSMAUG00000016156	Ddx1	99	97.959	Mesocricetus_auratus
ENSCVAG00000020927	ddx1	100	84.332	ENSMICG00000001023	DDX1	100	83.612	Microcebus_murinus
ENSCVAG00000020927	ddx1	100	83.787	ENSMOCG00000000257	Ddx1	99	83.787	Microtus_ochrogaster
ENSCVAG00000020927	ddx1	99	90.076	ENSMMOG00000015397	ddx1	99	90.076	Mola_mola
ENSCVAG00000020927	ddx1	100	84.877	ENSMODG00000010275	DDX1	99	84.877	Monodelphis_domestica
ENSCVAG00000020927	ddx1	100	92.507	ENSMALG00000016409	ddx1	99	92.507	Monopterus_albus
ENSCVAG00000020927	ddx1	100	83.924	MGP_CAROLIEiJ_G0017622	Ddx1	99	83.924	Mus_caroli
ENSCVAG00000020927	ddx1	100	83.924	ENSMUSG00000037149	Ddx1	99	83.924	Mus_musculus
ENSCVAG00000020927	ddx1	100	84.060	MGP_PahariEiJ_G0029378	Ddx1	99	84.060	Mus_pahari
ENSCVAG00000020927	ddx1	100	83.924	MGP_SPRETEiJ_G0018464	Ddx1	99	83.924	Mus_spretus
ENSCVAG00000020927	ddx1	100	84.196	ENSMPUG00000013606	DDX1	99	84.196	Mustela_putorius_furo
ENSCVAG00000020927	ddx1	100	84.196	ENSMLUG00000003027	DDX1	98	84.196	Myotis_lucifugus
ENSCVAG00000020927	ddx1	100	84.060	ENSNGAG00000015783	Ddx1	100	84.060	Nannospalax_galili
ENSCVAG00000020927	ddx1	88	88.165	ENSNBRG00000020677	ddx1	95	88.165	Neolamprologus_brichardi
ENSCVAG00000020927	ddx1	100	84.469	ENSNLEG00000014417	DDX1	100	83.763	Nomascus_leucogenys
ENSCVAG00000020927	ddx1	99	82.975	ENSMEUG00000008254	DDX1	99	82.763	Notamacropus_eugenii
ENSCVAG00000020927	ddx1	91	72.453	ENSOPRG00000004290	DDX1	91	72.453	Ochotona_princeps
ENSCVAG00000020927	ddx1	100	84.332	ENSODEG00000000569	DDX1	99	84.332	Octodon_degus
ENSCVAG00000020927	ddx1	100	92.653	ENSONIG00000000513	ddx1	99	92.653	Oreochromis_niloticus
ENSCVAG00000020927	ddx1	85	82.437	ENSOANG00000005450	DDX1	99	82.437	Ornithorhynchus_anatinus
ENSCVAG00000020927	ddx1	100	84.469	ENSOCUG00000007010	DDX1	99	84.469	Oryctolagus_cuniculus
ENSCVAG00000020927	ddx1	100	91.417	ENSORLG00000016709	ddx1	99	91.417	Oryzias_latipes
ENSCVAG00000020927	ddx1	100	91.281	ENSORLG00020003290	ddx1	100	91.281	Oryzias_latipes_hni
ENSCVAG00000020927	ddx1	100	91.008	ENSORLG00015022438	ddx1	100	91.008	Oryzias_latipes_hsok
ENSCVAG00000020927	ddx1	100	86.512	ENSOMEG00000017620	ddx1	99	85.014	Oryzias_melastigma
ENSCVAG00000020927	ddx1	100	83.967	ENSOGAG00000008730	DDX1	100	83.967	Otolemur_garnettii
ENSCVAG00000020927	ddx1	100	84.239	ENSOARG00000016369	DDX1	100	84.239	Ovis_aries
ENSCVAG00000020927	ddx1	100	84.196	ENSPPAG00000027432	DDX1	100	83.460	Pan_paniscus
ENSCVAG00000020927	ddx1	100	84.332	ENSPPRG00000020556	DDX1	100	83.612	Panthera_pardus
ENSCVAG00000020927	ddx1	100	84.196	ENSPTIG00000008267	DDX1	99	84.196	Panthera_tigris_altaica
ENSCVAG00000020927	ddx1	100	84.196	ENSPTRG00000011670	DDX1	100	83.460	Pan_troglodytes
ENSCVAG00000020927	ddx1	100	84.060	ENSPANG00000025185	DDX1	100	83.308	Papio_anubis
ENSCVAG00000020927	ddx1	100	85.150	ENSPKIG00000012466	ddx1	100	85.150	Paramormyrops_kingsleyae
ENSCVAG00000020927	ddx1	54	81.612	ENSPSIG00000012292	DDX1	99	81.612	Pelodiscus_sinensis
ENSCVAG00000020927	ddx1	100	90.327	ENSPMGG00000000782	ddx1	99	88.828	Periophthalmus_magnuspinnatus
ENSCVAG00000020927	ddx1	100	84.332	ENSPEMG00000016389	Ddx1	99	84.332	Peromyscus_maniculatus_bairdii
ENSCVAG00000020927	ddx1	100	77.310	ENSPMAG00000009118	-	100	77.310	Petromyzon_marinus
ENSCVAG00000020927	ddx1	100	85.286	ENSPCIG00000010941	DDX1	99	85.286	Phascolarctos_cinereus
ENSCVAG00000020927	ddx1	100	94.823	ENSPFOG00000011921	ddx1	99	94.823	Poecilia_formosa
ENSCVAG00000020927	ddx1	97	93.624	ENSPFOG00000006873	-	100	93.624	Poecilia_formosa
ENSCVAG00000020927	ddx1	100	94.550	ENSPLAG00000005939	ddx1	99	94.550	Poecilia_latipinna
ENSCVAG00000020927	ddx1	100	94.959	ENSPMEG00000011140	ddx1	99	94.959	Poecilia_mexicana
ENSCVAG00000020927	ddx1	100	94.959	ENSPREG00000011751	ddx1	99	94.959	Poecilia_reticulata
ENSCVAG00000020927	ddx1	100	84.332	ENSPPYG00000012638	DDX1	99	84.332	Pongo_abelii
ENSCVAG00000020927	ddx1	99	73.707	ENSPCAG00000001491	DDX1	99	72.207	Procavia_capensis
ENSCVAG00000020927	ddx1	100	82.289	ENSPCOG00000028185	DDX1	99	82.289	Propithecus_coquereli
ENSCVAG00000020927	ddx1	100	84.196	ENSPVAG00000013618	DDX1	99	84.196	Pteropus_vampyrus
ENSCVAG00000020927	ddx1	100	91.689	ENSPNYG00000013839	ddx1	100	91.248	Pundamilia_nyererei
ENSCVAG00000020927	ddx1	99	87.043	ENSPNAG00000017033	ddx1	97	87.156	Pygocentrus_nattereri
ENSCVAG00000020927	ddx1	100	84.060	ENSRNOG00000006652	Ddx1	99	84.060	Rattus_norvegicus
ENSCVAG00000020927	ddx1	100	83.243	ENSRBIG00000041664	DDX1	99	83.845	Rhinopithecus_bieti
ENSCVAG00000020927	ddx1	100	83.924	ENSRROG00000031167	DDX1	100	83.156	Rhinopithecus_roxellana
ENSCVAG00000020927	ddx1	100	84.469	ENSSBOG00000027577	DDX1	100	83.763	Saimiri_boliviensis_boliviensis
ENSCVAG00000020927	ddx1	99	79.664	ENSSHAG00000009363	DDX1	99	77.384	Sarcophilus_harrisii
ENSCVAG00000020927	ddx1	100	86.512	ENSSFOG00015014476	ddx1	99	86.512	Scleropages_formosus
ENSCVAG00000020927	ddx1	100	91.281	ENSSMAG00000010094	ddx1	99	91.281	Scophthalmus_maximus
ENSCVAG00000020927	ddx1	100	91.417	ENSSDUG00000012334	ddx1	100	91.199	Seriola_dumerili
ENSCVAG00000020927	ddx1	100	90.872	ENSSLDG00000025345	ddx1	100	90.592	Seriola_lalandi_dorsalis
ENSCVAG00000020927	ddx1	100	76.158	ENSSARG00000004536	DDX1	92	85.149	Sorex_araneus
ENSCVAG00000020927	ddx1	100	83.515	ENSSPUG00000018835	DDX1	99	83.515	Sphenodon_punctatus
ENSCVAG00000020927	ddx1	100	86.240	ENSSPAG00000023554	ddx1	99	86.240	Stegastes_partitus
ENSCVAG00000020927	ddx1	100	83.787	ENSSSCG00000008619	DDX1	99	83.787	Sus_scrofa
ENSCVAG00000020927	ddx1	100	85.014	ENSTGUG00000013096	DDX1	99	85.014	Taeniopygia_guttata
ENSCVAG00000020927	ddx1	100	90.327	ENSTRUG00000015765	ddx1	99	90.327	Takifugu_rubripes
ENSCVAG00000020927	ddx1	100	91.008	ENSTNIG00000016309	ddx1	99	91.008	Tetraodon_nigroviridis
ENSCVAG00000020927	ddx1	100	80.654	ENSTBEG00000008454	DDX1	100	80.654	Tupaia_belangeri
ENSCVAG00000020927	ddx1	100	84.469	ENSTTRG00000005081	DDX1	99	84.469	Tursiops_truncatus
ENSCVAG00000020927	ddx1	63	77.754	ENSUAMG00000017375	DDX1	86	77.754	Ursus_americanus
ENSCVAG00000020927	ddx1	100	84.060	ENSUMAG00000023450	DDX1	100	84.060	Ursus_maritimus
ENSCVAG00000020927	ddx1	85	87.886	ENSVPAG00000007764	DDX1	84	87.886	Vicugna_pacos
ENSCVAG00000020927	ddx1	100	84.332	ENSVVUG00000013085	DDX1	96	84.332	Vulpes_vulpes
ENSCVAG00000020927	ddx1	100	83.924	ENSXETG00000017825	ddx1	99	83.924	Xenopus_tropicalis
ENSCVAG00000020927	ddx1	100	91.903	ENSXCOG00000007082	ddx1	99	91.903	Xiphophorus_couchianus
ENSCVAG00000020927	ddx1	100	94.823	ENSXMAG00000004555	ddx1	99	94.823	Xiphophorus_maculatus