EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCVAG00000020933 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Plus strand
Length: 5060 bases
Position: chrKL652505.1:99159-104218
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000031574	RVT_1	PF00078.27	7.3e-33	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000026558	-	1203	-	ENSCVAP00000031574	400 (aa)	-	-

Gene Model

Click here to download ENSCVAG00000020933's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000020933's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCVAG00000020933	-	76	40.643	ENSCVAG00000009961	-	67	40.643
ENSCVAG00000020933	-	81	36.740	ENSCVAG00000018360	-	87	36.740

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000020933	-	67	37.662	ENSAPOG00000015742	-	97	37.662	Acanthochromis_polyacanthus
ENSCVAG00000020933	-	61	33.452	ENSAPOG00000014771	-	70	33.452	Acanthochromis_polyacanthus
ENSCVAG00000020933	-	74	34.132	ENSACIG00000010538	-	87	34.132	Amphilophus_citrinellus
ENSCVAG00000020933	-	69	40.952	ENSAOCG00000000894	-	94	40.952	Amphiprion_ocellaris
ENSCVAG00000020933	-	77	39.017	ENSAOCG00000019069	-	94	39.017	Amphiprion_ocellaris
ENSCVAG00000020933	-	93	32.126	ENSAOCG00000012592	-	89	32.126	Amphiprion_ocellaris
ENSCVAG00000020933	-	99	33.937	ENSAOCG00000014605	-	87	33.937	Amphiprion_ocellaris
ENSCVAG00000020933	-	62	43.373	ENSACLG00000010837	-	60	43.373	Astatotilapia_calliptera
ENSCVAG00000020933	-	68	39.871	ENSACLG00000012857	-	85	39.871	Astatotilapia_calliptera
ENSCVAG00000020933	-	83	30.997	ENSACLG00000011319	-	95	30.997	Astatotilapia_calliptera
ENSCVAG00000020933	-	79	39.216	ENSACLG00000013571	-	88	39.216	Astatotilapia_calliptera
ENSCVAG00000020933	-	55	38.462	ENSAMXG00000041014	-	98	38.462	Astyanax_mexicanus
ENSCVAG00000020933	-	76	36.257	ENSAMXG00000040763	-	87	36.257	Astyanax_mexicanus
ENSCVAG00000020933	-	83	37.798	ENSELUG00000014378	-	88	37.798	Esox_lucius
ENSCVAG00000020933	-	79	37.222	ENSHBUG00000007736	-	86	37.222	Haplochromis_burtoni
ENSCVAG00000020933	-	54	32.110	ENSIPUG00000010242	-	57	32.110	Ictalurus_punctatus
ENSCVAG00000020933	-	84	36.898	ENSKMAG00000014393	-	86	36.898	Kryptolebias_marmoratus
ENSCVAG00000020933	-	93	35.680	ENSKMAG00000014872	-	50	35.680	Kryptolebias_marmoratus
ENSCVAG00000020933	-	94	35.422	ENSKMAG00000009272	-	51	35.422	Kryptolebias_marmoratus
ENSCVAG00000020933	-	86	35.677	ENSLBEG00000015758	-	57	35.677	Labrus_bergylta
ENSCVAG00000020933	-	82	31.608	ENSLBEG00000020242	-	99	31.608	Labrus_bergylta
ENSCVAG00000020933	-	75	34.731	ENSLBEG00000004148	-	71	34.731	Labrus_bergylta
ENSCVAG00000020933	-	73	38.050	ENSLBEG00000023714	-	89	38.050	Labrus_bergylta
ENSCVAG00000020933	-	56	47.085	ENSLACG00000022331	-	67	47.085	Latimeria_chalumnae
ENSCVAG00000020933	-	90	37.250	ENSMZEG00005021767	-	50	37.250	Maylandia_zebra
ENSCVAG00000020933	-	94	36.516	ENSMZEG00005017030	-	79	36.516	Maylandia_zebra
ENSCVAG00000020933	-	62	43.373	ENSMZEG00005006211	-	60	43.373	Maylandia_zebra
ENSCVAG00000020933	-	60	38.628	ENSMZEG00005016362	-	98	38.628	Maylandia_zebra
ENSCVAG00000020933	-	84	30.239	ENSMZEG00005025877	-	87	30.239	Maylandia_zebra
ENSCVAG00000020933	-	94	36.516	ENSMZEG00005011529	-	78	36.516	Maylandia_zebra
ENSCVAG00000020933	-	84	30.239	ENSMZEG00005008304	-	87	30.239	Maylandia_zebra
ENSCVAG00000020933	-	86	37.659	ENSNBRG00000012595	-	89	37.659	Neolamprologus_brichardi
ENSCVAG00000020933	-	52	30.612	ENSNBRG00000013792	-	71	30.612	Neolamprologus_brichardi
ENSCVAG00000020933	-	85	39.578	ENSNBRG00000000972	-	93	39.578	Neolamprologus_brichardi
ENSCVAG00000020933	-	93	36.585	ENSORLG00000025901	-	50	36.585	Oryzias_latipes
ENSCVAG00000020933	-	62	39.759	ENSORLG00000028976	-	65	39.759	Oryzias_latipes
ENSCVAG00000020933	-	99	35.347	ENSORLG00000027043	-	50	35.347	Oryzias_latipes
ENSCVAG00000020933	-	69	37.898	ENSORLG00000028454	-	99	37.898	Oryzias_latipes
ENSCVAG00000020933	-	83	36.800	ENSORLG00000023713	-	95	36.800	Oryzias_latipes
ENSCVAG00000020933	-	76	37.391	ENSORLG00000028706	-	68	37.391	Oryzias_latipes
ENSCVAG00000020933	-	81	36.740	ENSORLG00000024236	-	95	36.740	Oryzias_latipes
ENSCVAG00000020933	-	92	35.941	ENSORLG00000023604	-	50	35.941	Oryzias_latipes
ENSCVAG00000020933	-	93	34.625	ENSORLG00000030415	-	51	34.625	Oryzias_latipes
ENSCVAG00000020933	-	91	36.634	ENSORLG00020014626	-	75	36.634	Oryzias_latipes_hni
ENSCVAG00000020933	-	76	36.550	ENSORLG00020007779	-	91	36.550	Oryzias_latipes_hni
ENSCVAG00000020933	-	76	37.609	ENSORLG00020018629	-	90	37.609	Oryzias_latipes_hni
ENSCVAG00000020933	-	69	38.730	ENSORLG00020014149	-	98	38.730	Oryzias_latipes_hni
ENSCVAG00000020933	-	59	37.050	ENSORLG00020022004	-	95	37.050	Oryzias_latipes_hni
ENSCVAG00000020933	-	76	36.842	ENSORLG00020010425	-	59	36.842	Oryzias_latipes_hni
ENSCVAG00000020933	-	58	35.897	ENSORLG00020004063	-	76	35.897	Oryzias_latipes_hni
ENSCVAG00000020933	-	53	40.239	ENSORLG00020007002	-	98	40.239	Oryzias_latipes_hni
ENSCVAG00000020933	-	76	37.609	ENSORLG00015007703	-	87	37.609	Oryzias_latipes_hsok
ENSCVAG00000020933	-	94	32.673	ENSORLG00015021206	-	79	32.673	Oryzias_latipes_hsok
ENSCVAG00000020933	-	55	31.034	ENSORLG00015021848	-	86	31.034	Oryzias_latipes_hsok
ENSCVAG00000020933	-	73	34.545	ENSORLG00015020895	-	88	34.545	Oryzias_latipes_hsok
ENSCVAG00000020933	-	63	38.144	ENSORLG00015022393	-	97	38.144	Oryzias_latipes_hsok
ENSCVAG00000020933	-	62	42.460	ENSORLG00015007976	-	66	42.460	Oryzias_latipes_hsok
ENSCVAG00000020933	-	62	34.615	ENSORLG00015000419	-	81	34.615	Oryzias_latipes_hsok
ENSCVAG00000020933	-	52	32.258	ENSORLG00015008227	-	69	32.258	Oryzias_latipes_hsok
ENSCVAG00000020933	-	77	31.805	ENSOMEG00000013211	-	80	31.805	Oryzias_melastigma
ENSCVAG00000020933	-	56	40.000	ENSPKIG00000013511	-	76	40.000	Paramormyrops_kingsleyae
ENSCVAG00000020933	-	94	32.367	ENSPFOG00000024463	-	52	32.367	Poecilia_formosa
ENSCVAG00000020933	-	53	32.710	ENSPLAG00000008560	-	65	32.710	Poecilia_latipinna
ENSCVAG00000020933	-	83	31.635	ENSPLAG00000015080	-	88	31.635	Poecilia_latipinna
ENSCVAG00000020933	-	54	32.589	ENSPMEG00000004673	-	55	32.589	Poecilia_mexicana
ENSCVAG00000020933	-	90	37.692	ENSPREG00000006501	-	70	37.692	Poecilia_reticulata
ENSCVAG00000020933	-	76	33.236	ENSPREG00000004933	-	86	33.236	Poecilia_reticulata
ENSCVAG00000020933	-	81	31.492	ENSPREG00000010319	-	87	31.492	Poecilia_reticulata
ENSCVAG00000020933	-	77	32.565	ENSPREG00000001352	-	97	32.565	Poecilia_reticulata
ENSCVAG00000020933	-	66	34.551	ENSPNYG00000002466	-	100	34.551	Pundamilia_nyererei
ENSCVAG00000020933	-	66	31.457	ENSPNYG00000023697	-	70	31.457	Pundamilia_nyererei
ENSCVAG00000020933	-	79	31.818	ENSPNAG00000024211	-	74	31.818	Pygocentrus_nattereri
ENSCVAG00000020933	-	85	35.263	ENSPNAG00000002786	-	92	35.263	Pygocentrus_nattereri
ENSCVAG00000020933	-	75	38.757	ENSPNAG00000014375	-	82	38.757	Pygocentrus_nattereri
ENSCVAG00000020933	-	87	33.835	ENSPNAG00000024749	-	94	33.835	Pygocentrus_nattereri
ENSCVAG00000020933	-	65	34.182	ENSPNAG00000010342	-	95	34.182	Pygocentrus_nattereri
ENSCVAG00000020933	-	78	33.807	ENSSMAG00000014015	-	78	33.807	Scophthalmus_maximus
ENSCVAG00000020933	-	68	31.949	ENSSDUG00000015364	-	67	31.949	Seriola_dumerili
ENSCVAG00000020933	-	64	35.495	ENSSDUG00000021791	-	98	35.495	Seriola_dumerili
ENSCVAG00000020933	-	84	31.367	ENSSLDG00000006955	-	90	31.367	Seriola_lalandi_dorsalis
ENSCVAG00000020933	-	90	32.918	ENSSPUG00000015446	-	90	32.918	Sphenodon_punctatus
ENSCVAG00000020933	-	94	32.732	ENSSPAG00000009351	-	71	32.732	Stegastes_partitus
ENSCVAG00000020933	-	91	37.469	ENSSPAG00000000151	-	88	37.469	Stegastes_partitus
ENSCVAG00000020933	-	94	30.935	ENSXETG00000030860	-	53	30.935	Xenopus_tropicalis
ENSCVAG00000020933	-	70	32.915	ENSXCOG00000016894	-	93	32.915	Xiphophorus_couchianus
ENSCVAG00000020933	-	78	33.721	ENSXMAG00000023211	-	76	33.721	Xiphophorus_maculatus
ENSCVAG00000020933	-	60	37.993	ENSXMAG00000026184	-	93	37.993	Xiphophorus_maculatus