EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCVAG00000020980 (Gene tree)
Gene ID: 107094711
Gene Symbol: tdrd1
Alias: im:7155161
Full Name: tudor domain containing 1
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Plus strand
Length: 12495 bases
Position: chrKL653002.1:479743-492237
Accession: 107094711
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000017795	TUDOR	PF00567.24	2.8e-109	1	4
ENSCVAP00000017795	TUDOR	PF00567.24	2.8e-109	2	4
ENSCVAP00000017795	TUDOR	PF00567.24	2.8e-109	3	4
ENSCVAP00000017795	TUDOR	PF00567.24	2.8e-109	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000026565	-	2970	XM_015390500	ENSCVAP00000017795	989 (aa)	XP_015245986	-

Gene Model

Click here to download ENSCVAG00000020980's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000020980's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000020980	tdrd1	92	33.589	ENSG00000095627	TDRD1	80	33.589	Homo_sapiens
ENSCVAG00000020980	tdrd1	97	58.672	ENSAPOG00000023199	tdrd1	89	58.870	Acanthochromis_polyacanthus
ENSCVAG00000020980	tdrd1	92	31.660	ENSAMEG00000015182	TDRD1	81	31.660	Ailuropoda_melanoleuca
ENSCVAG00000020980	tdrd1	98	60.417	ENSACIG00000010576	tdrd1	88	60.417	Amphilophus_citrinellus
ENSCVAG00000020980	tdrd1	99	61.807	ENSAOCG00000007059	tdrd1	89	56.107	Amphiprion_ocellaris
ENSCVAG00000020980	tdrd1	97	58.982	ENSAPEG00000017049	tdrd1	87	59.082	Amphiprion_percula
ENSCVAG00000020980	tdrd1	99	57.239	ENSATEG00000021627	tdrd1	91	57.239	Anabas_testudineus
ENSCVAG00000020980	tdrd1	95	31.673	ENSAPLG00000012609	TDRD1	92	31.673	Anas_platyrhynchos
ENSCVAG00000020980	tdrd1	89	30.055	ENSACAG00000009854	TDRD1	77	30.055	Anolis_carolinensis
ENSCVAG00000020980	tdrd1	92	33.773	ENSANAG00000035710	TDRD1	79	33.773	Aotus_nancymaae
ENSCVAG00000020980	tdrd1	97	58.234	ENSACLG00000014107	tdrd1	84	58.234	Astatotilapia_calliptera
ENSCVAG00000020980	tdrd1	96	45.030	ENSAMXG00000015146	tdrd1	86	45.030	Astyanax_mexicanus
ENSCVAG00000020980	tdrd1	92	31.099	ENSBTAG00000006855	TDRD1	79	31.099	Bos_taurus
ENSCVAG00000020980	tdrd1	92	33.333	ENSCJAG00000019270	TDRD1	79	33.333	Callithrix_jacchus
ENSCVAG00000020980	tdrd1	90	31.513	ENSCAFG00000011266	TDRD1	81	31.513	Canis_familiaris
ENSCVAG00000020980	tdrd1	90	31.513	ENSCAFG00020012373	TDRD1	80	32.237	Canis_lupus_dingo
ENSCVAG00000020980	tdrd1	91	30.480	ENSCHIG00000012766	TDRD1	81	30.480	Capra_hircus
ENSCVAG00000020980	tdrd1	92	31.954	ENSTSYG00000004935	TDRD1	80	33.003	Carlito_syrichta
ENSCVAG00000020980	tdrd1	94	32.068	ENSCPOG00000004190	TDRD1	80	32.068	Cavia_porcellus
ENSCVAG00000020980	tdrd1	92	33.297	ENSCCAG00000027375	TDRD1	80	32.606	Cebus_capucinus
ENSCVAG00000020980	tdrd1	93	33.260	ENSCATG00000035999	TDRD1	82	32.638	Cercocebus_atys
ENSCVAG00000020980	tdrd1	92	31.295	ENSCLAG00000003935	TDRD1	85	31.295	Chinchilla_lanigera
ENSCVAG00000020980	tdrd1	91	32.742	ENSCSAG00000005071	TDRD1	79	32.742	Chlorocebus_sabaeus
ENSCVAG00000020980	tdrd1	90	42.308	ENSCHOG00000001690	TDRD1	64	42.308	Choloepus_hoffmanni
ENSCVAG00000020980	tdrd1	94	33.568	ENSCPBG00000003780	TDRD1	81	33.568	Chrysemys_picta_bellii
ENSCVAG00000020980	tdrd1	93	33.333	ENSCANG00000035172	TDRD1	79	33.333	Colobus_angolensis_palliatus
ENSCVAG00000020980	tdrd1	90	33.295	ENSCGRG00001004632	Tdrd1	82	33.295	Cricetulus_griseus_chok1gshd
ENSCVAG00000020980	tdrd1	94	32.392	ENSCGRG00000004981	Tdrd1	80	32.392	Cricetulus_griseus_crigri
ENSCVAG00000020980	tdrd1	94	49.843	ENSCSEG00000006983	tdrd1	97	49.095	Cynoglossus_semilaevis
ENSCVAG00000020980	tdrd1	92	44.503	ENSDARG00000007465	tdrd1	82	44.318	Danio_rerio
ENSCVAG00000020980	tdrd1	90	31.468	ENSDNOG00000012114	TDRD1	78	31.697	Dasypus_novemcinctus
ENSCVAG00000020980	tdrd1	97	31.367	ENSDORG00000009986	Tdrd1	84	31.367	Dipodomys_ordii
ENSCVAG00000020980	tdrd1	87	32.887	ENSETEG00000020143	TDRD1	68	32.887	Echinops_telfairi
ENSCVAG00000020980	tdrd1	94	31.129	ENSEASG00005014802	TDRD1	84	31.129	Equus_asinus_asinus
ENSCVAG00000020980	tdrd1	94	32.881	ENSECAG00000009748	TDRD1	82	31.707	Equus_caballus
ENSCVAG00000020980	tdrd1	94	31.193	ENSEEUG00000010076	TDRD1	79	31.193	Erinaceus_europaeus
ENSCVAG00000020980	tdrd1	97	44.762	ENSELUG00000024364	tdrd1	87	44.762	Esox_lucius
ENSCVAG00000020980	tdrd1	92	32.272	ENSFCAG00000000632	TDRD1	79	32.272	Felis_catus
ENSCVAG00000020980	tdrd1	90	32.153	ENSFALG00000002237	TDRD1	88	32.596	Ficedula_albicollis
ENSCVAG00000020980	tdrd1	92	32.025	ENSFDAG00000013225	TDRD1	85	32.025	Fukomys_damarensis
ENSCVAG00000020980	tdrd1	100	48.473	ENSFHEG00000009203	tdrd1	93	48.670	Fundulus_heteroclitus
ENSCVAG00000020980	tdrd1	88	53.271	ENSGMOG00000016797	-	69	53.271	Gadus_morhua
ENSCVAG00000020980	tdrd1	98	61.067	ENSGAFG00000002668	tdrd1	86	61.067	Gambusia_affinis
ENSCVAG00000020980	tdrd1	87	55.850	ENSGACG00000006590	tdrd1	100	55.850	Gasterosteus_aculeatus
ENSCVAG00000020980	tdrd1	92	33.661	ENSGGOG00000004250	TDRD1	79	33.661	Gorilla_gorilla
ENSCVAG00000020980	tdrd1	99	59.222	ENSHBUG00000005216	tdrd1	88	59.222	Haplochromis_burtoni
ENSCVAG00000020980	tdrd1	93	30.664	ENSHGLG00000010877	TDRD1	79	30.664	Heterocephalus_glaber_female
ENSCVAG00000020980	tdrd1	92	32.928	ENSHGLG00100013857	TDRD1	83	32.928	Heterocephalus_glaber_male
ENSCVAG00000020980	tdrd1	93	45.259	ENSHCOG00000002840	tdrd1	81	45.259	Hippocampus_comes
ENSCVAG00000020980	tdrd1	93	46.584	ENSIPUG00000017232	tdrd1	89	46.584	Ictalurus_punctatus
ENSCVAG00000020980	tdrd1	91	31.886	ENSSTOG00000003221	TDRD1	80	31.886	Ictidomys_tridecemlineatus
ENSCVAG00000020980	tdrd1	93	32.338	ENSJJAG00000014720	Tdrd1	81	32.338	Jaculus_jaculus
ENSCVAG00000020980	tdrd1	99	60.333	ENSKMAG00000018558	tdrd1	97	60.333	Kryptolebias_marmoratus
ENSCVAG00000020980	tdrd1	99	56.226	ENSLBEG00000004161	tdrd1	86	56.526	Labrus_bergylta
ENSCVAG00000020980	tdrd1	91	32.319	ENSLACG00000011559	TDRD1	82	32.184	Latimeria_chalumnae
ENSCVAG00000020980	tdrd1	93	40.179	ENSLOCG00000012030	tdrd1	99	40.179	Lepisosteus_oculatus
ENSCVAG00000020980	tdrd1	87	33.220	ENSLAFG00000011575	TDRD1	93	33.220	Loxodonta_africana
ENSCVAG00000020980	tdrd1	93	33.553	ENSMFAG00000043487	TDRD1	80	32.638	Macaca_fascicularis
ENSCVAG00000020980	tdrd1	93	33.553	ENSMMUG00000022517	TDRD1	79	33.553	Macaca_mulatta
ENSCVAG00000020980	tdrd1	93	33.662	ENSMNEG00000031108	TDRD1	80	32.742	Macaca_nemestrina
ENSCVAG00000020980	tdrd1	93	33.333	ENSMLEG00000032281	TDRD1	79	33.333	Mandrillus_leucophaeus
ENSCVAG00000020980	tdrd1	94	58.914	ENSMAMG00000015287	tdrd1	88	58.554	Mastacembelus_armatus
ENSCVAG00000020980	tdrd1	97	58.333	ENSMZEG00005025315	tdrd1	85	58.333	Maylandia_zebra
ENSCVAG00000020980	tdrd1	92	31.395	ENSMGAG00000011067	TDRD1	97	31.395	Meleagris_gallopavo
ENSCVAG00000020980	tdrd1	86	34.002	ENSMAUG00000012164	Tdrd1	79	34.002	Mesocricetus_auratus
ENSCVAG00000020980	tdrd1	92	33.045	ENSMICG00000016190	TDRD1	79	33.045	Microcebus_murinus
ENSCVAG00000020980	tdrd1	92	32.413	ENSMOCG00000022360	Tdrd1	85	32.407	Microtus_ochrogaster
ENSCVAG00000020980	tdrd1	97	56.479	ENSMMOG00000014068	tdrd1	88	56.479	Mola_mola
ENSCVAG00000020980	tdrd1	98	31.481	ENSMODG00000009788	TDRD1	85	31.481	Monodelphis_domestica
ENSCVAG00000020980	tdrd1	95	58.824	ENSMALG00000022115	tdrd1	88	58.824	Monopterus_albus
ENSCVAG00000020980	tdrd1	91	32.784	MGP_CAROLIEiJ_G0023095	Tdrd1	85	32.474	Mus_caroli
ENSCVAG00000020980	tdrd1	91	33.092	ENSMUSG00000025081	Tdrd1	85	32.782	Mus_musculus
ENSCVAG00000020980	tdrd1	91	32.714	MGP_PahariEiJ_G0014583	Tdrd1	87	31.615	Mus_pahari
ENSCVAG00000020980	tdrd1	91	32.956	MGP_SPRETEiJ_G0024016	Tdrd1	85	33.024	Mus_spretus
ENSCVAG00000020980	tdrd1	88	33.447	ENSMPUG00000001987	TDRD1	76	33.447	Mustela_putorius_furo
ENSCVAG00000020980	tdrd1	94	31.122	ENSNGAG00000015231	Tdrd1	81	31.122	Nannospalax_galili
ENSCVAG00000020980	tdrd1	99	58.858	ENSNBRG00000017920	tdrd1	89	58.858	Neolamprologus_brichardi
ENSCVAG00000020980	tdrd1	92	31.758	ENSNLEG00000016228	TDRD1	79	30.825	Nomascus_leucogenys
ENSCVAG00000020980	tdrd1	91	32.881	ENSOPRG00000009180	TDRD1	81	32.881	Ochotona_princeps
ENSCVAG00000020980	tdrd1	93	32.058	ENSODEG00000011965	TDRD1	80	32.058	Octodon_degus
ENSCVAG00000020980	tdrd1	99	58.415	ENSONIG00000016382	tdrd1	89	58.415	Oreochromis_niloticus
ENSCVAG00000020980	tdrd1	92	31.584	ENSOANG00000001562	TDRD1	84	31.584	Ornithorhynchus_anatinus
ENSCVAG00000020980	tdrd1	91	32.986	ENSOCUG00000025327	TDRD1	82	32.847	Oryctolagus_cuniculus
ENSCVAG00000020980	tdrd1	97	52.725	ENSORLG00000004833	tdrd1	89	52.725	Oryzias_latipes
ENSCVAG00000020980	tdrd1	97	52.994	ENSORLG00020019231	tdrd1	92	53.711	Oryzias_latipes_hni
ENSCVAG00000020980	tdrd1	97	52.900	ENSORLG00015017184	tdrd1	88	52.900	Oryzias_latipes_hsok
ENSCVAG00000020980	tdrd1	99	51.884	ENSOMEG00000023637	tdrd1	87	51.884	Oryzias_melastigma
ENSCVAG00000020980	tdrd1	91	32.198	ENSOGAG00000001370	TDRD1	81	32.198	Otolemur_garnettii
ENSCVAG00000020980	tdrd1	91	30.376	ENSOARG00000014200	-	84	30.376	Ovis_aries
ENSCVAG00000020980	tdrd1	92	33.589	ENSPPAG00000041621	TDRD1	79	33.589	Pan_paniscus
ENSCVAG00000020980	tdrd1	92	31.913	ENSPPRG00000000191	TDRD1	79	31.913	Panthera_pardus
ENSCVAG00000020980	tdrd1	92	32.667	ENSPTIG00000010264	TDRD1	80	32.667	Panthera_tigris_altaica
ENSCVAG00000020980	tdrd1	92	33.589	ENSPTRG00000002958	TDRD1	79	33.589	Pan_troglodytes
ENSCVAG00000020980	tdrd1	93	33.333	ENSPANG00000020752	TDRD1	82	32.430	Papio_anubis
ENSCVAG00000020980	tdrd1	92	40.399	ENSPKIG00000010586	tdrd1	84	40.294	Paramormyrops_kingsleyae
ENSCVAG00000020980	tdrd1	92	31.385	ENSPSIG00000014655	TDRD1	79	31.385	Pelodiscus_sinensis
ENSCVAG00000020980	tdrd1	91	47.231	ENSPMGG00000018890	tdrd1	99	47.231	Periophthalmus_magnuspinnatus
ENSCVAG00000020980	tdrd1	95	32.403	ENSPEMG00000004582	Tdrd1	85	32.403	Peromyscus_maniculatus_bairdii
ENSCVAG00000020980	tdrd1	98	32.560	ENSPCIG00000009739	TDRD1	84	32.560	Phascolarctos_cinereus
ENSCVAG00000020980	tdrd1	99	60.827	ENSPFOG00000002145	tdrd1	94	60.827	Poecilia_formosa
ENSCVAG00000020980	tdrd1	99	61.193	ENSPLAG00000010241	tdrd1	87	61.193	Poecilia_latipinna
ENSCVAG00000020980	tdrd1	99	59.295	ENSPMEG00000021893	tdrd1	87	59.295	Poecilia_mexicana
ENSCVAG00000020980	tdrd1	99	62.194	ENSPREG00000022663	tdrd1	87	62.194	Poecilia_reticulata
ENSCVAG00000020980	tdrd1	91	31.933	ENSPPYG00000002671	TDRD1	78	31.933	Pongo_abelii
ENSCVAG00000020980	tdrd1	90	31.915	ENSPCAG00000006692	TDRD1	69	31.915	Procavia_capensis
ENSCVAG00000020980	tdrd1	92	32.611	ENSPCOG00000026619	TDRD1	79	32.611	Propithecus_coquereli
ENSCVAG00000020980	tdrd1	90	31.966	ENSPVAG00000003055	TDRD1	81	31.966	Pteropus_vampyrus
ENSCVAG00000020980	tdrd1	97	59.000	ENSPNYG00000001706	tdrd1	86	59.000	Pundamilia_nyererei
ENSCVAG00000020980	tdrd1	92	47.065	ENSPNAG00000005831	tdrd1	87	45.825	Pygocentrus_nattereri
ENSCVAG00000020980	tdrd1	91	32.288	ENSRNOG00000017064	Tdrd1	79	32.288	Rattus_norvegicus
ENSCVAG00000020980	tdrd1	92	33.515	ENSRBIG00000029668	TDRD1	81	33.515	Rhinopithecus_bieti
ENSCVAG00000020980	tdrd1	92	33.552	ENSRROG00000043379	TDRD1	79	33.552	Rhinopithecus_roxellana
ENSCVAG00000020980	tdrd1	92	33.844	ENSSBOG00000023561	TDRD1	79	33.844	Saimiri_boliviensis_boliviensis
ENSCVAG00000020980	tdrd1	98	32.108	ENSSHAG00000014311	TDRD1	85	32.108	Sarcophilus_harrisii
ENSCVAG00000020980	tdrd1	92	39.917	ENSSFOG00015022020	tdrd1	90	39.917	Scleropages_formosus
ENSCVAG00000020980	tdrd1	94	58.502	ENSSMAG00000019271	tdrd1	86	58.502	Scophthalmus_maximus
ENSCVAG00000020980	tdrd1	94	59.815	ENSSDUG00000022012	tdrd1	90	58.871	Seriola_dumerili
ENSCVAG00000020980	tdrd1	94	59.609	ENSSLDG00000006423	tdrd1	91	58.972	Seriola_lalandi_dorsalis
ENSCVAG00000020980	tdrd1	86	34.262	ENSSARG00000008828	TDRD1	52	34.262	Sorex_araneus
ENSCVAG00000020980	tdrd1	90	33.370	ENSSPUG00000005015	TDRD1	79	33.370	Sphenodon_punctatus
ENSCVAG00000020980	tdrd1	99	57.992	ENSSPAG00000018805	tdrd1	90	57.992	Stegastes_partitus
ENSCVAG00000020980	tdrd1	91	32.778	ENSSSCG00000021075	TDRD1	80	32.778	Sus_scrofa
ENSCVAG00000020980	tdrd1	89	32.695	ENSTGUG00000010905	TDRD1	94	33.333	Taeniopygia_guttata
ENSCVAG00000020980	tdrd1	95	53.692	ENSTRUG00000012142	tdrd1	91	51.638	Takifugu_rubripes
ENSCVAG00000020980	tdrd1	84	46.693	ENSTNIG00000018898	tdrd1	99	47.082	Tetraodon_nigroviridis
ENSCVAG00000020980	tdrd1	93	33.199	ENSTBEG00000014417	-	82	31.013	Tupaia_belangeri
ENSCVAG00000020980	tdrd1	92	30.681	ENSTTRG00000010147	TDRD1	84	30.681	Tursiops_truncatus
ENSCVAG00000020980	tdrd1	92	33.259	ENSUAMG00000009025	TDRD1	81	32.447	Ursus_americanus
ENSCVAG00000020980	tdrd1	92	32.609	ENSUMAG00000000705	TDRD1	80	32.609	Ursus_maritimus
ENSCVAG00000020980	tdrd1	92	31.503	ENSVPAG00000004000	TDRD1	80	31.503	Vicugna_pacos
ENSCVAG00000020980	tdrd1	90	31.656	ENSVVUG00000009750	TDRD1	81	31.656	Vulpes_vulpes
ENSCVAG00000020980	tdrd1	93	63.306	ENSXCOG00000006412	tdrd1	98	63.306	Xiphophorus_couchianus
ENSCVAG00000020980	tdrd1	99	62.189	ENSXMAG00000008104	tdrd1	94	62.189	Xiphophorus_maculatus