EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCVAG00000020984 (Gene tree)
Gene ID: 107097483
Gene Symbol: trip4
Alias: im:7143009|si:busm1-221i3.1|si:dkey-173l11.4|zgc:153348
Full Name: activating signal cointegrator 1-like
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Minus strand
Length: 8894 bases
Position: chrKL653201.1:12000-20893
Accession: 107097483
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000017843	ASCH	PF04266.14	1.1e-19	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000026627	-	1933	XM_015394633	ENSCVAP00000017843	526 (aa)	XP_015250119	UPI000742741D

Gene Model

Click here to download ENSCVAG00000020984's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000020984's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCVAG00000020984	trip4	98	95.367	ENSCVAG00000021094	-	90	95.367

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000020984	trip4	99	57.303	ENSG00000103671	TRIP4	97	56.201	Homo_sapiens
ENSCVAG00000020984	trip4	99	62.188	ENSAPOG00000023326	trip4	90	61.742	Acanthochromis_polyacanthus
ENSCVAG00000020984	trip4	99	57.358	ENSAMEG00000002591	TRIP4	90	57.358	Ailuropoda_melanoleuca
ENSCVAG00000020984	trip4	99	73.603	ENSACIG00000010577	trip4	91	73.603	Amphilophus_citrinellus
ENSCVAG00000020984	trip4	99	81.714	ENSAOCG00000000395	trip4	92	81.714	Amphiprion_ocellaris
ENSCVAG00000020984	trip4	99	82.274	ENSAPEG00000003621	trip4	91	82.274	Amphiprion_percula
ENSCVAG00000020984	trip4	99	81.310	ENSATEG00000019577	trip4	91	81.503	Anabas_testudineus
ENSCVAG00000020984	trip4	98	61.121	ENSAPLG00000004612	TRIP4	90	61.121	Anas_platyrhynchos
ENSCVAG00000020984	trip4	99	59.738	ENSACAG00000007077	TRIP4	82	59.738	Anolis_carolinensis
ENSCVAG00000020984	trip4	99	57.547	ENSANAG00000027612	TRIP4	90	57.547	Aotus_nancymaae
ENSCVAG00000020984	trip4	99	83.430	ENSACLG00000013819	trip4	97	83.591	Astatotilapia_calliptera
ENSCVAG00000020984	trip4	99	69.790	ENSAMXG00000007270	trip4	91	69.790	Astyanax_mexicanus
ENSCVAG00000020984	trip4	99	56.711	ENSBTAG00000014493	TRIP4	96	57.143	Bos_taurus
ENSCVAG00000020984	trip4	99	57.439	ENSCJAG00000005107	TRIP4	90	57.439	Callithrix_jacchus
ENSCVAG00000020984	trip4	99	57.170	ENSCAFG00000017091	TRIP4	90	57.170	Canis_familiaris
ENSCVAG00000020984	trip4	99	57.170	ENSCAFG00020008960	TRIP4	90	57.170	Canis_lupus_dingo
ENSCVAG00000020984	trip4	98	56.546	ENSCHIG00000023818	TRIP4	91	56.546	Capra_hircus
ENSCVAG00000020984	trip4	98	56.391	ENSTSYG00000007185	TRIP4	89	56.391	Carlito_syrichta
ENSCVAG00000020984	trip4	63	69.444	ENSCAPG00000017624	TRIP4	90	48.611	Cavia_aperea
ENSCVAG00000020984	trip4	99	56.604	ENSCPOG00000006483	TRIP4	89	56.604	Cavia_porcellus
ENSCVAG00000020984	trip4	99	54.545	ENSCCAG00000026483	TRIP4	89	54.545	Cebus_capucinus
ENSCVAG00000020984	trip4	99	57.925	ENSCATG00000041144	TRIP4	90	57.925	Cercocebus_atys
ENSCVAG00000020984	trip4	99	57.491	ENSCLAG00000006872	TRIP4	96	58.131	Chinchilla_lanigera
ENSCVAG00000020984	trip4	99	57.736	ENSCSAG00000012499	TRIP4	90	57.736	Chlorocebus_sabaeus
ENSCVAG00000020984	trip4	68	57.418	ENSCHOG00000010776	TRIP4	62	57.418	Choloepus_hoffmanni
ENSCVAG00000020984	trip4	99	60.225	ENSCPBG00000006093	TRIP4	88	60.355	Chrysemys_picta_bellii
ENSCVAG00000020984	trip4	97	43.623	ENSCSAVG00000005293	-	89	43.623	Ciona_savignyi
ENSCVAG00000020984	trip4	99	55.619	ENSCANG00000033593	TRIP4	89	55.619	Colobus_angolensis_palliatus
ENSCVAG00000020984	trip4	99	57.063	ENSCGRG00001021158	Trip4	96	57.491	Cricetulus_griseus_chok1gshd
ENSCVAG00000020984	trip4	99	40.755	ENSCGRG00000002340	Trip4	95	41.065	Cricetulus_griseus_crigri
ENSCVAG00000020984	trip4	99	76.154	ENSCSEG00000009015	trip4	90	76.346	Cynoglossus_semilaevis
ENSCVAG00000020984	trip4	99	69.923	ENSDARG00000098074	trip4	91	70.115	Danio_rerio
ENSCVAG00000020984	trip4	99	58.240	ENSDNOG00000008654	TRIP4	90	59.322	Dasypus_novemcinctus
ENSCVAG00000020984	trip4	99	57.089	ENSDORG00000014914	Trip4	96	57.524	Dipodomys_ordii
ENSCVAG00000020984	trip4	75	42.040	FBgn0031115	CG11710	80	40.710	Drosophila_melanogaster
ENSCVAG00000020984	trip4	98	58.065	ENSETEG00000001597	TRIP4	88	58.065	Echinops_telfairi
ENSCVAG00000020984	trip4	99	45.131	ENSEBUG00000009039	trip4	90	45.522	Eptatretus_burgeri
ENSCVAG00000020984	trip4	99	57.170	ENSEASG00005006538	TRIP4	90	57.170	Equus_asinus_asinus
ENSCVAG00000020984	trip4	98	57.495	ENSECAG00000024689	TRIP4	95	57.495	Equus_caballus
ENSCVAG00000020984	trip4	77	58.156	ENSEEUG00000007741	TRIP4	70	58.156	Erinaceus_europaeus
ENSCVAG00000020984	trip4	99	69.732	ENSELUG00000022449	trip4	94	69.866	Esox_lucius
ENSCVAG00000020984	trip4	99	57.736	ENSFCAG00000010618	TRIP4	90	57.736	Felis_catus
ENSCVAG00000020984	trip4	99	59.888	ENSFALG00000009816	TRIP4	90	59.888	Ficedula_albicollis
ENSCVAG00000020984	trip4	99	57.196	ENSFDAG00000017051	TRIP4	97	57.196	Fukomys_damarensis
ENSCVAG00000020984	trip4	98	88.439	ENSFHEG00000015795	trip4	90	88.439	Fundulus_heteroclitus
ENSCVAG00000020984	trip4	99	72.222	ENSGMOG00000008455	trip4	90	72.222	Gadus_morhua
ENSCVAG00000020984	trip4	99	60.413	ENSGALG00000030672	TRIP4	90	60.413	Gallus_gallus
ENSCVAG00000020984	trip4	99	87.091	ENSGAFG00000003491	trip4	96	87.259	Gambusia_affinis
ENSCVAG00000020984	trip4	99	77.841	ENSGACG00000016986	trip4	91	77.841	Gasterosteus_aculeatus
ENSCVAG00000020984	trip4	83	61.726	ENSGAGG00000003671	TRIP4	80	61.726	Gopherus_agassizii
ENSCVAG00000020984	trip4	99	57.303	ENSGGOG00000022608	TRIP4	90	57.303	Gorilla_gorilla
ENSCVAG00000020984	trip4	99	83.430	ENSHBUG00000021071	trip4	91	83.430	Haplochromis_burtoni
ENSCVAG00000020984	trip4	99	56.449	ENSHGLG00000009286	TRIP4	97	56.449	Heterocephalus_glaber_female
ENSCVAG00000020984	trip4	99	56.134	ENSHGLG00100017760	TRIP4	97	56.134	Heterocephalus_glaber_male
ENSCVAG00000020984	trip4	99	78.805	ENSHCOG00000017904	trip4	91	78.805	Hippocampus_comes
ENSCVAG00000020984	trip4	98	69.025	ENSIPUG00000013205	trip4	92	69.598	Ictalurus_punctatus
ENSCVAG00000020984	trip4	99	57.656	ENSSTOG00000014228	TRIP4	96	58.095	Ictidomys_tridecemlineatus
ENSCVAG00000020984	trip4	94	53.386	ENSJJAG00000001629	Trip4	88	53.386	Jaculus_jaculus
ENSCVAG00000020984	trip4	99	82.659	ENSKMAG00000001297	trip4	91	82.659	Kryptolebias_marmoratus
ENSCVAG00000020984	trip4	99	81.503	ENSLBEG00000018354	trip4	91	81.503	Labrus_bergylta
ENSCVAG00000020984	trip4	99	61.798	ENSLACG00000014856	TRIP4	91	61.798	Latimeria_chalumnae
ENSCVAG00000020984	trip4	99	65.275	ENSLOCG00000014993	trip4	90	65.275	Lepisosteus_oculatus
ENSCVAG00000020984	trip4	99	58.113	ENSLAFG00000017612	TRIP4	89	58.113	Loxodonta_africana
ENSCVAG00000020984	trip4	99	57.736	ENSMFAG00000036568	TRIP4	90	57.736	Macaca_fascicularis
ENSCVAG00000020984	trip4	99	57.736	ENSMMUG00000009882	TRIP4	90	57.736	Macaca_mulatta
ENSCVAG00000020984	trip4	99	57.736	ENSMNEG00000033592	TRIP4	90	57.736	Macaca_nemestrina
ENSCVAG00000020984	trip4	99	57.925	ENSMLEG00000027911	TRIP4	90	57.925	Mandrillus_leucophaeus
ENSCVAG00000020984	trip4	99	79.846	ENSMAMG00000013374	trip4	91	79.846	Mastacembelus_armatus
ENSCVAG00000020984	trip4	99	83.430	ENSMZEG00005013450	trip4	92	83.591	Maylandia_zebra
ENSCVAG00000020984	trip4	99	58.569	ENSMICG00000008679	TRIP4	90	58.569	Microcebus_murinus
ENSCVAG00000020984	trip4	99	57.728	ENSMOCG00000012669	Trip4	96	58.161	Microtus_ochrogaster
ENSCVAG00000020984	trip4	99	79.576	ENSMMOG00000002315	trip4	92	79.576	Mola_mola
ENSCVAG00000020984	trip4	98	60.413	ENSMODG00000010743	TRIP4	81	60.413	Monodelphis_domestica
ENSCVAG00000020984	trip4	99	58.287	MGP_CAROLIEiJ_G0032370	Trip4	90	58.287	Mus_caroli
ENSCVAG00000020984	trip4	99	58.052	ENSMUSG00000032386	Trip4	96	58.491	Mus_musculus
ENSCVAG00000020984	trip4	99	56.983	MGP_PahariEiJ_G0015235	Trip4	96	57.411	Mus_pahari
ENSCVAG00000020984	trip4	99	58.240	MGP_SPRETEiJ_G0033509	Trip4	90	58.240	Mus_spretus
ENSCVAG00000020984	trip4	99	56.981	ENSMPUG00000000568	TRIP4	90	56.981	Mustela_putorius_furo
ENSCVAG00000020984	trip4	95	58.203	ENSMLUG00000013367	TRIP4	91	58.203	Myotis_lucifugus
ENSCVAG00000020984	trip4	99	56.538	ENSNGAG00000019566	Trip4	96	56.957	Nannospalax_galili
ENSCVAG00000020984	trip4	99	81.538	ENSNBRG00000020663	trip4	91	82.115	Neolamprologus_brichardi
ENSCVAG00000020984	trip4	99	57.303	ENSNLEG00000012455	TRIP4	95	56.768	Nomascus_leucogenys
ENSCVAG00000020984	trip4	60	55.152	ENSMEUG00000005886	TRIP4	66	55.152	Notamacropus_eugenii
ENSCVAG00000020984	trip4	99	54.887	ENSOPRG00000009512	TRIP4	90	54.887	Ochotona_princeps
ENSCVAG00000020984	trip4	99	55.680	ENSODEG00000016494	TRIP4	96	56.473	Octodon_degus
ENSCVAG00000020984	trip4	98	81.749	ENSONIG00000005703	trip4	99	81.749	Oreochromis_niloticus
ENSCVAG00000020984	trip4	98	60.152	ENSOANG00000013357	TRIP4	87	60.152	Ornithorhynchus_anatinus
ENSCVAG00000020984	trip4	99	56.554	ENSOCUG00000002322	TRIP4	90	56.554	Oryctolagus_cuniculus
ENSCVAG00000020984	trip4	99	75.816	ENSORLG00000001710	trip4	91	75.816	Oryzias_latipes
ENSCVAG00000020984	trip4	99	75.816	ENSORLG00020022346	trip4	91	75.816	Oryzias_latipes_hni
ENSCVAG00000020984	trip4	99	75.816	ENSORLG00015022509	trip4	94	76.062	Oryzias_latipes_hsok
ENSCVAG00000020984	trip4	99	77.735	ENSOMEG00000007655	trip4	99	77.992	Oryzias_melastigma
ENSCVAG00000020984	trip4	98	50.095	ENSOGAG00000012427	TRIP4	88	52.008	Otolemur_garnettii
ENSCVAG00000020984	trip4	98	56.357	ENSOARG00000020739	TRIP4	89	56.357	Ovis_aries
ENSCVAG00000020984	trip4	99	58.192	ENSPPAG00000017953	TRIP4	90	58.192	Pan_paniscus
ENSCVAG00000020984	trip4	99	57.736	ENSPPRG00000013668	TRIP4	90	57.736	Panthera_pardus
ENSCVAG00000020984	trip4	99	57.547	ENSPTIG00000014502	TRIP4	89	57.547	Panthera_tigris_altaica
ENSCVAG00000020984	trip4	99	53.030	ENSPTRG00000007160	TRIP4	89	53.030	Pan_troglodytes
ENSCVAG00000020984	trip4	99	57.925	ENSPANG00000016750	TRIP4	90	57.925	Papio_anubis
ENSCVAG00000020984	trip4	99	66.288	ENSPKIG00000009253	trip4	99	66.288	Paramormyrops_kingsleyae
ENSCVAG00000020984	trip4	99	66.098	ENSPKIG00000022978	-	91	66.098	Paramormyrops_kingsleyae
ENSCVAG00000020984	trip4	94	60.552	ENSPSIG00000012082	TRIP4	88	60.552	Pelodiscus_sinensis
ENSCVAG00000020984	trip4	99	75.191	ENSPMGG00000019015	trip4	89	75.191	Periophthalmus_magnuspinnatus
ENSCVAG00000020984	trip4	99	56.742	ENSPEMG00000012446	Trip4	96	57.170	Peromyscus_maniculatus_bairdii
ENSCVAG00000020984	trip4	98	60.417	ENSPCIG00000029450	TRIP4	85	60.417	Phascolarctos_cinereus
ENSCVAG00000020984	trip4	98	87.259	ENSPFOG00000014732	trip4	90	87.259	Poecilia_formosa
ENSCVAG00000020984	trip4	98	86.680	ENSPLAG00000013794	trip4	92	86.680	Poecilia_latipinna
ENSCVAG00000020984	trip4	98	87.452	ENSPMEG00000001331	trip4	90	87.452	Poecilia_mexicana
ENSCVAG00000020984	trip4	98	87.259	ENSPREG00000006576	trip4	90	87.259	Poecilia_reticulata
ENSCVAG00000020984	trip4	99	58.569	ENSPPYG00000006550	TRIP4	90	58.569	Pongo_abelii
ENSCVAG00000020984	trip4	98	49.248	ENSPCAG00000016310	TRIP4	89	49.248	Procavia_capensis
ENSCVAG00000020984	trip4	87	64.474	ENSPCOG00000013484	TRIP4	86	64.474	Propithecus_coquereli
ENSCVAG00000020984	trip4	92	54.108	ENSPVAG00000016613	TRIP4	87	54.949	Pteropus_vampyrus
ENSCVAG00000020984	trip4	99	73.410	ENSPNYG00000011318	trip4	89	74.952	Pundamilia_nyererei
ENSCVAG00000020984	trip4	99	70.076	ENSPNAG00000020884	trip4	91	70.076	Pygocentrus_nattereri
ENSCVAG00000020984	trip4	99	56.052	ENSRNOG00000016121	Trip4	90	56.052	Rattus_norvegicus
ENSCVAG00000020984	trip4	85	57.975	ENSRBIG00000038027	TRIP4	88	57.975	Rhinopithecus_bieti
ENSCVAG00000020984	trip4	99	58.192	ENSRROG00000030525	TRIP4	90	58.192	Rhinopithecus_roxellana
ENSCVAG00000020984	trip4	99	50.763	ENSSBOG00000020516	TRIP4	89	51.527	Saimiri_boliviensis_boliviensis
ENSCVAG00000020984	trip4	94	61.719	ENSSHAG00000000040	TRIP4	91	61.719	Sarcophilus_harrisii
ENSCVAG00000020984	trip4	99	67.424	ENSSFOG00015000143	trip4	91	67.424	Scleropages_formosus
ENSCVAG00000020984	trip4	100	77.947	ENSSMAG00000010539	trip4	96	78.571	Scophthalmus_maximus
ENSCVAG00000020984	trip4	99	79.769	ENSSDUG00000000225	trip4	94	79.769	Seriola_dumerili
ENSCVAG00000020984	trip4	99	79.383	ENSSLDG00000000215	trip4	91	79.383	Seriola_lalandi_dorsalis
ENSCVAG00000020984	trip4	80	56.507	ENSSARG00000003710	TRIP4	71	56.507	Sorex_araneus
ENSCVAG00000020984	trip4	98	57.008	ENSSPUG00000004511	TRIP4	90	57.965	Sphenodon_punctatus
ENSCVAG00000020984	trip4	99	81.382	ENSSPAG00000008520	trip4	91	81.382	Stegastes_partitus
ENSCVAG00000020984	trip4	99	57.547	ENSSSCG00000004552	TRIP4	88	56.442	Sus_scrofa
ENSCVAG00000020984	trip4	98	58.945	ENSTGUG00000004673	TRIP4	91	60.264	Taeniopygia_guttata
ENSCVAG00000020984	trip4	99	76.054	ENSTRUG00000016488	trip4	93	76.200	Takifugu_rubripes
ENSCVAG00000020984	trip4	99	74.340	ENSTNIG00000009582	trip4	89	74.340	Tetraodon_nigroviridis
ENSCVAG00000020984	trip4	94	58.020	ENSTBEG00000015881	TRIP4	90	58.020	Tupaia_belangeri
ENSCVAG00000020984	trip4	85	62.857	ENSTTRG00000009674	TRIP4	77	62.857	Tursiops_truncatus
ENSCVAG00000020984	trip4	99	57.547	ENSUMAG00000012640	TRIP4	90	57.547	Ursus_maritimus
ENSCVAG00000020984	trip4	99	53.208	ENSVPAG00000010808	TRIP4	89	53.208	Vicugna_pacos
ENSCVAG00000020984	trip4	99	57.815	ENSVVUG00000013776	TRIP4	90	57.815	Vulpes_vulpes
ENSCVAG00000020984	trip4	99	57.649	ENSXETG00000010649	trip4	90	57.649	Xenopus_tropicalis
ENSCVAG00000020984	trip4	98	87.066	ENSXMAG00000000526	trip4	92	87.066	Xiphophorus_maculatus