EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCVAG00000021013 (Gene tree)
Gene ID: -
Gene Symbol: rbm46
Alias: fe11d09|wu:fe11d09|zgc:153695
Full Name: RNA binding motif protein 46
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Minus strand
Length: 22435 bases
Position: chrKL652549.1:615586-638020
Accession: ZDB-GENE-061013-298
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000031615	DND1_DSRM	PF14709.7	4.1e-20	1	1
ENSCVAP00000031615	RRM_1	PF00076.22	1.5e-33	1	3
ENSCVAP00000031615	RRM_1	PF00076.22	1.5e-33	2	3
ENSCVAP00000031615	RRM_1	PF00076.22	1.5e-33	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000032480	-	1407	-	ENSCVAP00000031615	468 (aa)	-	-

Gene Model

Click here to download ENSCVAG00000021013's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000021013's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCVAG00000021013	rbm46	64	53.443	ENSCVAG00000012550	syncrip	54	51.111
ENSCVAG00000021013	rbm46	65	66.230	ENSCVAG00000020144	rbm47	58	64.516
ENSCVAG00000021013	rbm46	84	63.514	ENSCVAG00000010520	a1cf	86	63.514
ENSCVAG00000021013	rbm46	63	55.963	ENSCVAG00000019995	syncripl	57	51.133

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000021013	rbm46	97	63.445	ENSG00000151962	RBM46	94	80.800	Homo_sapiens
ENSCVAG00000021013	rbm46	92	74.165	ENSAPOG00000009209	rbm46	89	74.165	Acanthochromis_polyacanthus
ENSCVAG00000021013	rbm46	95	64.224	ENSAMEG00000013290	RBM46	87	64.224	Ailuropoda_melanoleuca
ENSCVAG00000021013	rbm46	95	73.026	ENSACIG00000014500	rbm46	89	73.026	Amphilophus_citrinellus
ENSCVAG00000021013	rbm46	93	72.889	ENSAOCG00000001892	-	86	74.885	Amphiprion_ocellaris
ENSCVAG00000021013	rbm46	92	72.383	ENSAPEG00000017762	rbm46	97	74.885	Amphiprion_percula
ENSCVAG00000021013	rbm46	94	77.169	ENSATEG00000010775	rbm46	85	77.169	Anabas_testudineus
ENSCVAG00000021013	rbm46	95	62.690	ENSAPLG00000005116	RBM46	99	62.690	Anas_platyrhynchos
ENSCVAG00000021013	rbm46	96	64.835	ENSACAG00000015599	RBM46	86	64.396	Anolis_carolinensis
ENSCVAG00000021013	rbm46	97	63.866	ENSANAG00000029193	RBM46	98	64.440	Aotus_nancymaae
ENSCVAG00000021013	rbm46	95	73.319	ENSACLG00000016153	rbm46	81	73.684	Astatotilapia_calliptera
ENSCVAG00000021013	rbm46	93	63.090	ENSAMXG00000020892	-	88	63.090	Astyanax_mexicanus
ENSCVAG00000021013	rbm46	94	66.295	ENSAMXG00000009397	rbm46	99	66.295	Astyanax_mexicanus
ENSCVAG00000021013	rbm46	97	63.025	ENSBTAG00000001696	RBM46	98	63.025	Bos_taurus
ENSCVAG00000021013	rbm46	97	63.368	ENSCJAG00000001768	RBM46	98	64.147	Callithrix_jacchus
ENSCVAG00000021013	rbm46	97	63.445	ENSCAFG00000008473	RBM46	98	63.445	Canis_familiaris
ENSCVAG00000021013	rbm46	96	64.086	ENSCAFG00020002468	RBM46	93	64.286	Canis_lupus_dingo
ENSCVAG00000021013	rbm46	97	63.235	ENSCHIG00000000502	RBM46	98	63.235	Capra_hircus
ENSCVAG00000021013	rbm46	97	63.025	ENSTSYG00000010435	RBM46	98	63.774	Carlito_syrichta
ENSCVAG00000021013	rbm46	76	64.690	ENSCAPG00000011841	-	98	65.574	Cavia_aperea
ENSCVAG00000021013	rbm46	97	62.316	ENSCAPG00000011928	-	98	62.316	Cavia_aperea
ENSCVAG00000021013	rbm46	95	61.388	ENSCPOG00000019272	-	85	61.388	Cavia_porcellus
ENSCVAG00000021013	rbm46	97	62.316	ENSCPOG00000010284	-	98	62.851	Cavia_porcellus
ENSCVAG00000021013	rbm46	98	62.162	ENSCPOG00000020396	-	95	62.162	Cavia_porcellus
ENSCVAG00000021013	rbm46	97	63.655	ENSCCAG00000027619	-	98	64.224	Cebus_capucinus
ENSCVAG00000021013	rbm46	96	52.442	ENSCCAG00000001323	-	96	52.597	Cebus_capucinus
ENSCVAG00000021013	rbm46	97	63.235	ENSCATG00000040148	RBM46	98	63.793	Cercocebus_atys
ENSCVAG00000021013	rbm46	97	61.814	ENSCLAG00000005846	-	98	62.338	Chinchilla_lanigera
ENSCVAG00000021013	rbm46	98	61.983	ENSCLAG00000011886	-	93	61.983	Chinchilla_lanigera
ENSCVAG00000021013	rbm46	96	63.793	ENSCSAG00000003263	RBM46	87	63.793	Chlorocebus_sabaeus
ENSCVAG00000021013	rbm46	96	63.226	ENSCHOG00000003429	RBM46	87	63.226	Choloepus_hoffmanni
ENSCVAG00000021013	rbm46	90	63.014	ENSCPBG00000009314	RBM46	91	63.789	Chrysemys_picta_bellii
ENSCVAG00000021013	rbm46	97	63.445	ENSCANG00000039065	RBM46	98	64.009	Colobus_angolensis_palliatus
ENSCVAG00000021013	rbm46	97	63.445	ENSCGRG00001016714	Rbm46	98	64.009	Cricetulus_griseus_chok1gshd
ENSCVAG00000021013	rbm46	97	63.445	ENSCGRG00000011738	Rbm46	98	64.009	Cricetulus_griseus_crigri
ENSCVAG00000021013	rbm46	95	64.206	ENSCSEG00000005530	rbm46	97	64.206	Cynoglossus_semilaevis
ENSCVAG00000021013	rbm46	94	66.446	ENSDARG00000079452	rbm46	88	66.964	Danio_rerio
ENSCVAG00000021013	rbm46	96	64.086	ENSDNOG00000016195	RBM46	87	64.086	Dasypus_novemcinctus
ENSCVAG00000021013	rbm46	97	63.445	ENSDORG00000006405	Rbm46	98	64.009	Dipodomys_ordii
ENSCVAG00000021013	rbm46	95	64.208	ENSETEG00000014902	RBM46	86	64.208	Echinops_telfairi
ENSCVAG00000021013	rbm46	96	63.656	ENSEASG00005015821	RBM46	87	63.656	Equus_asinus_asinus
ENSCVAG00000021013	rbm46	97	63.025	ENSECAG00000007649	RBM46	98	63.025	Equus_caballus
ENSCVAG00000021013	rbm46	96	61.935	ENSEEUG00000011824	RBM46	87	61.935	Erinaceus_europaeus
ENSCVAG00000021013	rbm46	76	69.444	ENSELUG00000008166	rbm46	94	69.444	Esox_lucius
ENSCVAG00000021013	rbm46	96	63.830	ENSFCAG00000029812	RBM46	98	63.931	Felis_catus
ENSCVAG00000021013	rbm46	92	62.247	ENSFALG00000013157	RBM46	87	62.247	Ficedula_albicollis
ENSCVAG00000021013	rbm46	96	61.064	ENSFDAG00000006445	-	93	61.064	Fukomys_damarensis
ENSCVAG00000021013	rbm46	96	61.555	ENSFDAG00000019281	-	87	61.555	Fukomys_damarensis
ENSCVAG00000021013	rbm46	81	77.749	ENSFHEG00000013257	rbm46	87	77.749	Fundulus_heteroclitus
ENSCVAG00000021013	rbm46	91	59.091	ENSGALG00000009278	RBM46	95	59.243	Gallus_gallus
ENSCVAG00000021013	rbm46	92	70.670	ENSGAFG00000020245	rbm46	88	69.213	Gambusia_affinis
ENSCVAG00000021013	rbm46	96	62.151	ENSGAGG00000002019	RBM46	88	62.151	Gopherus_agassizii
ENSCVAG00000021013	rbm46	97	63.445	ENSGGOG00000001876	RBM46	98	64.009	Gorilla_gorilla
ENSCVAG00000021013	rbm46	94	71.461	ENSHBUG00000009609	rbm46	91	73.012	Haplochromis_burtoni
ENSCVAG00000021013	rbm46	88	56.604	ENSHGLG00000010742	-	81	56.796	Heterocephalus_glaber_female
ENSCVAG00000021013	rbm46	91	62.929	ENSHGLG00000002463	-	95	63.768	Heterocephalus_glaber_female
ENSCVAG00000021013	rbm46	95	54.444	ENSHGLG00000002940	-	87	54.444	Heterocephalus_glaber_female
ENSCVAG00000021013	rbm46	88	56.604	ENSHGLG00100004977	-	81	56.796	Heterocephalus_glaber_male
ENSCVAG00000021013	rbm46	95	50.652	ENSHGLG00100018987	-	86	50.658	Heterocephalus_glaber_male
ENSCVAG00000021013	rbm46	97	61.603	ENSHGLG00100012752	-	98	62.121	Heterocephalus_glaber_male
ENSCVAG00000021013	rbm46	92	52.273	ENSHCOG00000012998	rbm46	88	52.045	Hippocampus_comes
ENSCVAG00000021013	rbm46	94	62.128	ENSIPUG00000024038	rbm46	95	62.633	Ictalurus_punctatus
ENSCVAG00000021013	rbm46	97	63.235	ENSSTOG00000007918	RBM46	98	63.793	Ictidomys_tridecemlineatus
ENSCVAG00000021013	rbm46	95	62.851	ENSJJAG00000003902	Rbm46	96	63.355	Jaculus_jaculus
ENSCVAG00000021013	rbm46	93	75.973	ENSKMAG00000015127	rbm46	84	75.973	Kryptolebias_marmoratus
ENSCVAG00000021013	rbm46	96	63.362	ENSLACG00000002062	RBM46	88	62.633	Latimeria_chalumnae
ENSCVAG00000021013	rbm46	92	67.727	ENSLOCG00000008298	rbm46	95	67.955	Lepisosteus_oculatus
ENSCVAG00000021013	rbm46	95	64.425	ENSLAFG00000015448	RBM46	98	64.425	Loxodonta_africana
ENSCVAG00000021013	rbm46	97	63.445	ENSMFAG00000043485	RBM46	98	64.009	Macaca_fascicularis
ENSCVAG00000021013	rbm46	97	63.445	ENSMMUG00000021147	RBM46	98	63.445	Macaca_mulatta
ENSCVAG00000021013	rbm46	97	63.445	ENSMNEG00000002787	RBM46	98	64.009	Macaca_nemestrina
ENSCVAG00000021013	rbm46	97	63.235	ENSMLEG00000029756	RBM46	98	63.793	Mandrillus_leucophaeus
ENSCVAG00000021013	rbm46	93	76.417	ENSMAMG00000009093	rbm46	89	76.417	Mastacembelus_armatus
ENSCVAG00000021013	rbm46	94	75.566	ENSMZEG00005027849	rbm46	93	74.720	Maylandia_zebra
ENSCVAG00000021013	rbm46	90	59.773	ENSMGAG00000001457	RBM46	95	59.778	Meleagris_gallopavo
ENSCVAG00000021013	rbm46	97	63.445	ENSMAUG00000009911	Rbm46	98	64.009	Mesocricetus_auratus
ENSCVAG00000021013	rbm46	97	63.866	ENSMICG00000042747	RBM46	98	64.440	Microcebus_murinus
ENSCVAG00000021013	rbm46	97	63.235	ENSMOCG00000001188	Rbm46	98	63.793	Microtus_ochrogaster
ENSCVAG00000021013	rbm46	94	70.640	ENSMMOG00000011214	rbm46	86	70.640	Mola_mola
ENSCVAG00000021013	rbm46	98	62.893	ENSMODG00000001302	RBM46	81	62.893	Monodelphis_domestica
ENSCVAG00000021013	rbm46	89	73.709	ENSMALG00000006185	rbm46	86	75.312	Monopterus_albus
ENSCVAG00000021013	rbm46	97	63.655	MGP_CAROLIEiJ_G0025101	Rbm46	98	64.224	Mus_caroli
ENSCVAG00000021013	rbm46	97	63.866	ENSMUSG00000033882	Rbm46	98	64.440	Mus_musculus
ENSCVAG00000021013	rbm46	97	63.235	MGP_PahariEiJ_G0026544	Rbm46	98	63.793	Mus_pahari
ENSCVAG00000021013	rbm46	97	64.076	MGP_SPRETEiJ_G0026043	Rbm46	98	64.655	Mus_spretus
ENSCVAG00000021013	rbm46	97	63.445	ENSMPUG00000005670	RBM46	98	63.445	Mustela_putorius_furo
ENSCVAG00000021013	rbm46	96	63.226	ENSMLUG00000003221	RBM46	87	63.226	Myotis_lucifugus
ENSCVAG00000021013	rbm46	97	63.866	ENSNGAG00000004231	Rbm46	98	64.301	Nannospalax_galili
ENSCVAG00000021013	rbm46	94	76.027	ENSNBRG00000000273	rbm46	85	76.027	Neolamprologus_brichardi
ENSCVAG00000021013	rbm46	97	63.235	ENSNLEG00000006184	RBM46	98	63.793	Nomascus_leucogenys
ENSCVAG00000021013	rbm46	86	62.679	ENSMEUG00000013328	RBM46	99	62.379	Notamacropus_eugenii
ENSCVAG00000021013	rbm46	58	74.909	ENSOPRG00000007136	RBM46	97	76.364	Ochotona_princeps
ENSCVAG00000021013	rbm46	96	63.283	ENSODEG00000000735	-	98	63.420	Octodon_degus
ENSCVAG00000021013	rbm46	96	62.340	ENSODEG00000018002	-	91	62.340	Octodon_degus
ENSCVAG00000021013	rbm46	92	72.444	ENSONIG00000014096	rbm46	96	72.444	Oreochromis_niloticus
ENSCVAG00000021013	rbm46	95	64.719	ENSOANG00000002141	RBM46	95	64.719	Ornithorhynchus_anatinus
ENSCVAG00000021013	rbm46	96	64.086	ENSOCUG00000017859	RBM46	87	64.086	Oryctolagus_cuniculus
ENSCVAG00000021013	rbm46	94	71.526	ENSORLG00000002429	rbm46	90	71.982	Oryzias_latipes
ENSCVAG00000021013	rbm46	94	69.565	ENSORLG00020022154	rbm46	83	69.181	Oryzias_latipes_hni
ENSCVAG00000021013	rbm46	94	71.918	ENSORLG00015020234	rbm46	89	71.918	Oryzias_latipes_hsok
ENSCVAG00000021013	rbm46	93	68.490	ENSOMEG00000022580	rbm46	87	68.341	Oryzias_melastigma
ENSCVAG00000021013	rbm46	96	64.086	ENSOGAG00000005647	RBM46	87	64.086	Otolemur_garnettii
ENSCVAG00000021013	rbm46	97	63.235	ENSOARG00000016406	RBM46	98	63.235	Ovis_aries
ENSCVAG00000021013	rbm46	97	63.445	ENSPPAG00000043236	RBM46	98	64.009	Pan_paniscus
ENSCVAG00000021013	rbm46	96	63.617	ENSPPRG00000009416	RBM46	98	63.715	Panthera_pardus
ENSCVAG00000021013	rbm46	96	63.617	ENSPTIG00000017449	RBM46	98	63.715	Panthera_tigris_altaica
ENSCVAG00000021013	rbm46	97	63.445	ENSPTRG00000016538	RBM46	98	64.009	Pan_troglodytes
ENSCVAG00000021013	rbm46	97	63.445	ENSPANG00000004186	RBM46	98	64.009	Papio_anubis
ENSCVAG00000021013	rbm46	95	64.381	ENSPKIG00000015334	rbm46	80	64.680	Paramormyrops_kingsleyae
ENSCVAG00000021013	rbm46	95	63.147	ENSPSIG00000006429	RBM46	94	63.147	Pelodiscus_sinensis
ENSCVAG00000021013	rbm46	93	71.724	ENSPMGG00000019872	rbm46	93	71.724	Periophthalmus_magnuspinnatus
ENSCVAG00000021013	rbm46	97	63.445	ENSPEMG00000013899	Rbm46	98	64.009	Peromyscus_maniculatus_bairdii
ENSCVAG00000021013	rbm46	97	63.445	ENSPCIG00000029626	RBM46	98	63.445	Phascolarctos_cinereus
ENSCVAG00000021013	rbm46	85	91.246	ENSPFOG00000001079	rbm46	74	91.246	Poecilia_formosa
ENSCVAG00000021013	rbm46	95	78.834	ENSPLAG00000004541	rbm46	80	78.834	Poecilia_latipinna
ENSCVAG00000021013	rbm46	94	81.859	ENSPMEG00000015724	rbm46	92	81.859	Poecilia_mexicana
ENSCVAG00000021013	rbm46	94	82.045	ENSPREG00000014464	rbm46	95	82.045	Poecilia_reticulata
ENSCVAG00000021013	rbm46	96	64.086	ENSPPYG00000015144	RBM46	87	64.086	Pongo_abelii
ENSCVAG00000021013	rbm46	95	62.931	ENSPCAG00000003110	RBM46	86	63.362	Procavia_capensis
ENSCVAG00000021013	rbm46	97	63.579	ENSPCOG00000024347	RBM46	98	64.147	Propithecus_coquereli
ENSCVAG00000021013	rbm46	96	63.871	ENSPVAG00000008376	RBM46	87	63.871	Pteropus_vampyrus
ENSCVAG00000021013	rbm46	93	67.538	ENSPNAG00000025312	rbm46	88	67.686	Pygocentrus_nattereri
ENSCVAG00000021013	rbm46	96	64.301	ENSRNOG00000025823	Rbm46	87	64.301	Rattus_norvegicus
ENSCVAG00000021013	rbm46	97	62.815	ENSRBIG00000032583	RBM46	98	63.362	Rhinopithecus_bieti
ENSCVAG00000021013	rbm46	97	62.605	ENSRROG00000044288	RBM46	98	63.147	Rhinopithecus_roxellana
ENSCVAG00000021013	rbm46	97	63.655	ENSSBOG00000033028	RBM46	98	64.224	Saimiri_boliviensis_boliviensis
ENSCVAG00000021013	rbm46	96	63.734	ENSSHAG00000012596	RBM46	87	63.734	Sarcophilus_harrisii
ENSCVAG00000021013	rbm46	95	65.708	ENSSFOG00015000087	rbm46	87	65.044	Scleropages_formosus
ENSCVAG00000021013	rbm46	93	68.879	ENSSMAG00000017042	rbm46	94	68.879	Scophthalmus_maximus
ENSCVAG00000021013	rbm46	94	75.893	ENSSDUG00000020645	rbm46	88	75.893	Seriola_dumerili
ENSCVAG00000021013	rbm46	96	63.871	ENSSARG00000006520	RBM46	87	63.871	Sorex_araneus
ENSCVAG00000021013	rbm46	97	61.814	ENSSPUG00000012525	-	88	61.814	Sphenodon_punctatus
ENSCVAG00000021013	rbm46	97	62.924	ENSSPUG00000004773	-	98	62.924	Sphenodon_punctatus
ENSCVAG00000021013	rbm46	94	74.658	ENSSPAG00000013697	rbm46	94	74.658	Stegastes_partitus
ENSCVAG00000021013	rbm46	96	63.694	ENSSSCG00000008994	RBM46	97	63.694	Sus_scrofa
ENSCVAG00000021013	rbm46	95	60.475	ENSTGUG00000005307	RBM46	99	60.475	Taeniopygia_guttata
ENSCVAG00000021013	rbm46	94	69.369	ENSTRUG00000004237	rbm46	91	69.369	Takifugu_rubripes
ENSCVAG00000021013	rbm46	94	66.667	ENSTNIG00000008714	rbm46	85	66.667	Tetraodon_nigroviridis
ENSCVAG00000021013	rbm46	96	63.441	ENSTBEG00000013949	RBM46	87	63.441	Tupaia_belangeri
ENSCVAG00000021013	rbm46	96	64.301	ENSTTRG00000001239	RBM46	87	64.301	Tursiops_truncatus
ENSCVAG00000021013	rbm46	97	63.445	ENSUAMG00000026593	RBM46	98	63.445	Ursus_americanus
ENSCVAG00000021013	rbm46	97	63.445	ENSUMAG00000016442	RBM46	98	63.445	Ursus_maritimus
ENSCVAG00000021013	rbm46	97	63.445	ENSVVUG00000024957	RBM46	98	64.208	Vulpes_vulpes
ENSCVAG00000021013	rbm46	65	63.312	ENSXETG00000032067	-	85	64.241	Xenopus_tropicalis
ENSCVAG00000021013	rbm46	95	61.438	ENSXETG00000022412	-	86	59.615	Xenopus_tropicalis
ENSCVAG00000021013	rbm46	95	44.563	ENSXETG00000032344	-	86	44.563	Xenopus_tropicalis
ENSCVAG00000021013	rbm46	93	78.681	ENSXMAG00000008237	rbm46	90	78.681	Xiphophorus_maculatus