EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCVAG00000021038 (Gene tree)
Gene ID: 107090728
Gene Symbol: scrt2
Alias: fc69h09|wu:fc69h09|zgc:162551
Full Name: scratch family transcriptional repressor 2
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Minus strand
Length: 8521 bases
Position: chrKL652809.1:408485-417005
Accession: 107090728
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000031638	zf-C2H2	PF00096.26	1.5e-25	1	4
ENSCVAP00000031638	zf-C2H2	PF00096.26	1.5e-25	2	4
ENSCVAP00000031638	zf-C2H2	PF00096.26	1.5e-25	3	4
ENSCVAP00000031638	zf-C2H2	PF00096.26	1.5e-25	4	4
ENSCVAP00000031638	zf-met	PF12874.7	3.7e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000026676	-	5143	XM_015384282	ENSCVAP00000031638	319 (aa)	XP_015239768	UPI0007426AC7

Gene Model

Click here to download ENSCVAG00000021038's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000021038's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCVAG00000021038	scrt2	50	45.333	ENSCVAG00000012216	-	80	45.333
ENSCVAG00000021038	scrt2	54	37.324	ENSCVAG00000022991	-	90	42.857
ENSCVAG00000021038	scrt2	50	37.956	ENSCVAG00000014269	-	96	37.956
ENSCVAG00000021038	scrt2	50	39.394	ENSCVAG00000007051	-	99	39.394
ENSCVAG00000021038	scrt2	54	31.884	ENSCVAG00000018135	-	84	31.884
ENSCVAG00000021038	scrt2	74	30.275	ENSCVAG00000003396	-	57	43.421
ENSCVAG00000021038	scrt2	56	34.586	ENSCVAG00000009747	-	52	34.586
ENSCVAG00000021038	scrt2	53	42.308	ENSCVAG00000016862	-	95	42.308
ENSCVAG00000021038	scrt2	58	40.230	ENSCVAG00000013337	-	90	42.857
ENSCVAG00000021038	scrt2	58	41.667	ENSCVAG00000019764	-	71	41.667
ENSCVAG00000021038	scrt2	85	40.789	ENSCVAG00000002506	-	95	40.789
ENSCVAG00000021038	scrt2	81	41.176	ENSCVAG00000002500	-	85	41.176
ENSCVAG00000021038	scrt2	55	38.532	ENSCVAG00000002488	-	71	38.532
ENSCVAG00000021038	scrt2	64	37.719	ENSCVAG00000003250	-	72	37.719
ENSCVAG00000021038	scrt2	54	38.462	ENSCVAG00000014734	-	91	38.462
ENSCVAG00000021038	scrt2	99	59.451	ENSCVAG00000003190	-	100	59.451
ENSCVAG00000021038	scrt2	50	38.636	ENSCVAG00000007073	-	71	38.636
ENSCVAG00000021038	scrt2	73	36.184	ENSCVAG00000013692	prdm5	61	36.735
ENSCVAG00000021038	scrt2	77	37.500	ENSCVAG00000003497	-	83	37.500
ENSCVAG00000021038	scrt2	55	40.594	ENSCVAG00000012180	-	99	40.594
ENSCVAG00000021038	scrt2	55	50.000	ENSCVAG00000016483	snai2	53	57.343
ENSCVAG00000021038	scrt2	55	37.594	ENSCVAG00000012228	-	79	37.594
ENSCVAG00000021038	scrt2	53	36.090	ENSCVAG00000016092	-	55	36.090
ENSCVAG00000021038	scrt2	52	37.594	ENSCVAG00000001568	-	64	37.594
ENSCVAG00000021038	scrt2	52	40.602	ENSCVAG00000020126	-	71	40.602
ENSCVAG00000021038	scrt2	97	64.725	ENSCVAG00000009561	scrt1b	96	64.725
ENSCVAG00000021038	scrt2	58	41.284	ENSCVAG00000023054	-	55	41.284
ENSCVAG00000021038	scrt2	60	34.711	ENSCVAG00000011712	-	66	34.711
ENSCVAG00000021038	scrt2	60	38.182	ENSCVAG00000018383	-	67	38.519
ENSCVAG00000021038	scrt2	52	38.636	ENSCVAG00000006389	-	89	40.984

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000021038	scrt2	97	60.256	ENSAPOG00000015197	-	97	60.256	Acanthochromis_polyacanthus
ENSCVAG00000021038	scrt2	100	97.179	ENSAPOG00000003680	scrt2	100	97.179	Acanthochromis_polyacanthus
ENSCVAG00000021038	scrt2	97	65.484	ENSAPOG00000009279	scrt1b	96	64.516	Acanthochromis_polyacanthus
ENSCVAG00000021038	scrt2	97	59.875	ENSACIG00000006586	-	97	59.875	Amphilophus_citrinellus
ENSCVAG00000021038	scrt2	100	62.963	ENSACIG00000001296	-	100	63.272	Amphilophus_citrinellus
ENSCVAG00000021038	scrt2	97	63.226	ENSACIG00000013613	scrt1b	96	63.226	Amphilophus_citrinellus
ENSCVAG00000021038	scrt2	100	84.639	ENSACIG00000012604	scrt2	100	84.639	Amphilophus_citrinellus
ENSCVAG00000021038	scrt2	100	97.179	ENSAOCG00000021557	scrt2	100	97.179	Amphiprion_ocellaris
ENSCVAG00000021038	scrt2	97	59.248	ENSAOCG00000023304	-	97	59.248	Amphiprion_ocellaris
ENSCVAG00000021038	scrt2	97	65.484	ENSAOCG00000003910	scrt1b	96	64.516	Amphiprion_ocellaris
ENSCVAG00000021038	scrt2	100	97.179	ENSAPEG00000022558	scrt2	100	97.179	Amphiprion_percula
ENSCVAG00000021038	scrt2	97	59.248	ENSAPEG00000005677	-	97	59.248	Amphiprion_percula
ENSCVAG00000021038	scrt2	97	65.484	ENSAPEG00000000869	scrt1b	96	64.516	Amphiprion_percula
ENSCVAG00000021038	scrt2	100	63.030	ENSATEG00000003195	-	100	63.030	Anabas_testudineus
ENSCVAG00000021038	scrt2	100	94.984	ENSATEG00000023998	scrt2	100	94.984	Anabas_testudineus
ENSCVAG00000021038	scrt2	97	61.093	ENSATEG00000011660	-	97	61.093	Anabas_testudineus
ENSCVAG00000021038	scrt2	97	65.161	ENSATEG00000002302	scrt1b	96	65.161	Anabas_testudineus
ENSCVAG00000021038	scrt2	74	70.213	ENSACAG00000016109	SCRT2	95	70.213	Anolis_carolinensis
ENSCVAG00000021038	scrt2	97	64.194	ENSACLG00000007162	scrt1b	96	64.194	Astatotilapia_calliptera
ENSCVAG00000021038	scrt2	97	60.062	ENSACLG00000012046	-	97	60.062	Astatotilapia_calliptera
ENSCVAG00000021038	scrt2	89	77.193	ENSAMXG00000034158	scrt2	97	77.193	Astyanax_mexicanus
ENSCVAG00000021038	scrt2	97	64.423	ENSAMXG00000042624	SCRT1	98	64.423	Astyanax_mexicanus
ENSCVAG00000021038	scrt2	97	65.372	ENSAMXG00000038085	scrt1a	97	65.372	Astyanax_mexicanus
ENSCVAG00000021038	scrt2	56	56.667	WBGene00000468	ces-1	59	55.000	Caenorhabditis_elegans
ENSCVAG00000021038	scrt2	97	64.516	ENSCPBG00000018899	SCRT1	97	64.516	Chrysemys_picta_bellii
ENSCVAG00000021038	scrt2	88	60.357	ENSCPBG00000027613	SCRT2	100	60.357	Chrysemys_picta_bellii
ENSCVAG00000021038	scrt2	100	91.536	ENSCSEG00000021542	scrt2	100	91.536	Cynoglossus_semilaevis
ENSCVAG00000021038	scrt2	97	64.078	ENSCSEG00000008596	scrt1b	96	64.078	Cynoglossus_semilaevis
ENSCVAG00000021038	scrt2	97	59.190	ENSCSEG00000014892	-	97	59.190	Cynoglossus_semilaevis
ENSCVAG00000021038	scrt2	97	64.725	ENSDARG00000100821	scrt1a	97	64.725	Danio_rerio
ENSCVAG00000021038	scrt2	97	65.372	ENSDARG00000040214	scrt1b	97	65.372	Danio_rerio
ENSCVAG00000021038	scrt2	100	86.503	ENSELUG00000023883	scrt2	100	87.730	Esox_lucius
ENSCVAG00000021038	scrt2	97	65.696	ENSELUG00000005435	scrt1b	96	65.696	Esox_lucius
ENSCVAG00000021038	scrt2	97	65.584	ENSELUG00000022228	scrt1a	96	65.584	Esox_lucius
ENSCVAG00000021038	scrt2	80	65.370	ENSFALG00000005718	SCRT2	97	66.537	Ficedula_albicollis
ENSCVAG00000021038	scrt2	97	64.078	ENSFHEG00000014820	scrt1b	96	64.078	Fundulus_heteroclitus
ENSCVAG00000021038	scrt2	97	59.561	ENSFHEG00000009794	-	97	59.561	Fundulus_heteroclitus
ENSCVAG00000021038	scrt2	100	86.834	ENSFHEG00000005732	scrt2	100	86.834	Fundulus_heteroclitus
ENSCVAG00000021038	scrt2	96	64.286	ENSGMOG00000000629	scrt1b	96	64.286	Gadus_morhua
ENSCVAG00000021038	scrt2	99	78.723	ENSGMOG00000019519	scrt2	99	78.723	Gadus_morhua
ENSCVAG00000021038	scrt2	97	58.900	ENSGALG00000028912	SCRT2	97	59.547	Gallus_gallus
ENSCVAG00000021038	scrt2	99	57.994	ENSGAFG00000009650	-	100	57.994	Gambusia_affinis
ENSCVAG00000021038	scrt2	100	92.790	ENSGAFG00000003093	scrt2	100	92.790	Gambusia_affinis
ENSCVAG00000021038	scrt2	97	64.725	ENSGAFG00000007636	scrt1b	96	64.725	Gambusia_affinis
ENSCVAG00000021038	scrt2	97	58.750	ENSGACG00000004072	-	97	58.750	Gasterosteus_aculeatus
ENSCVAG00000021038	scrt2	96	62.338	ENSGACG00000008982	scrt1b	96	62.338	Gasterosteus_aculeatus
ENSCVAG00000021038	scrt2	66	72.512	ENSGAGG00000020760	-	74	72.512	Gopherus_agassizii
ENSCVAG00000021038	scrt2	100	60.815	ENSGAGG00000020761	SCRT2	100	60.815	Gopherus_agassizii
ENSCVAG00000021038	scrt2	97	63.548	ENSGAGG00000011736	SCRT1	98	63.548	Gopherus_agassizii
ENSCVAG00000021038	scrt2	100	96.865	ENSHBUG00000012492	scrt2	100	96.865	Haplochromis_burtoni
ENSCVAG00000021038	scrt2	97	59.561	ENSHBUG00000019101	-	97	59.561	Haplochromis_burtoni
ENSCVAG00000021038	scrt2	97	64.194	ENSHBUG00000016621	scrt1b	96	64.194	Haplochromis_burtoni
ENSCVAG00000021038	scrt2	97	58.974	ENSHCOG00000016179	-	97	59.615	Hippocampus_comes
ENSCVAG00000021038	scrt2	97	64.078	ENSHCOG00000016704	scrt1b	96	64.078	Hippocampus_comes
ENSCVAG00000021038	scrt2	100	84.375	ENSHCOG00000008116	scrt2	100	84.375	Hippocampus_comes
ENSCVAG00000021038	scrt2	97	60.841	ENSIPUG00000005547	-	98	60.841	Ictalurus_punctatus
ENSCVAG00000021038	scrt2	97	64.952	ENSIPUG00000004551	scrt1a	97	64.952	Ictalurus_punctatus
ENSCVAG00000021038	scrt2	97	64.725	ENSKMAG00000005484	scrt1b	96	64.725	Kryptolebias_marmoratus
ENSCVAG00000021038	scrt2	99	58.841	ENSKMAG00000009489	-	100	58.841	Kryptolebias_marmoratus
ENSCVAG00000021038	scrt2	100	96.552	ENSKMAG00000018087	scrt2	100	96.552	Kryptolebias_marmoratus
ENSCVAG00000021038	scrt2	100	95.625	ENSLBEG00000015419	scrt2	100	95.625	Labrus_bergylta
ENSCVAG00000021038	scrt2	97	58.621	ENSLBEG00000023388	-	97	58.621	Labrus_bergylta
ENSCVAG00000021038	scrt2	97	66.019	ENSLACG00000003588	SCRT1	96	66.019	Latimeria_chalumnae
ENSCVAG00000021038	scrt2	97	67.314	ENSLOCG00000007573	scrt1b	97	67.314	Lepisosteus_oculatus
ENSCVAG00000021038	scrt2	100	65.337	ENSLOCG00000002246	scrt2	100	65.217	Lepisosteus_oculatus
ENSCVAG00000021038	scrt2	100	96.238	ENSMAMG00000001291	scrt2	100	96.238	Mastacembelus_armatus
ENSCVAG00000021038	scrt2	97	64.516	ENSMAMG00000011698	scrt1b	96	64.516	Mastacembelus_armatus
ENSCVAG00000021038	scrt2	97	64.194	ENSMZEG00005005627	scrt1b	96	64.194	Maylandia_zebra
ENSCVAG00000021038	scrt2	97	59.561	ENSMZEG00005026702	-	97	59.561	Maylandia_zebra
ENSCVAG00000021038	scrt2	100	96.865	ENSMZEG00005026445	scrt2	100	96.865	Maylandia_zebra
ENSCVAG00000021038	scrt2	80	66.016	ENSMGAG00000016579	SCRT2	97	66.797	Meleagris_gallopavo
ENSCVAG00000021038	scrt2	99	94.340	ENSMMOG00000009272	scrt2	99	94.654	Mola_mola
ENSCVAG00000021038	scrt2	97	59.375	ENSMMOG00000018345	-	97	59.375	Mola_mola
ENSCVAG00000021038	scrt2	97	65.049	ENSMMOG00000003327	scrt1b	96	64.078	Mola_mola
ENSCVAG00000021038	scrt2	97	64.725	ENSMALG00000012704	scrt1b	96	64.725	Monopterus_albus
ENSCVAG00000021038	scrt2	100	79.937	ENSMALG00000013656	scrt2	100	79.937	Monopterus_albus
ENSCVAG00000021038	scrt2	100	84.639	ENSNBRG00000007221	scrt2	100	84.639	Neolamprologus_brichardi
ENSCVAG00000021038	scrt2	97	64.078	ENSNBRG00000013983	scrt1b	96	64.078	Neolamprologus_brichardi
ENSCVAG00000021038	scrt2	97	59.561	ENSNBRG00000014882	-	97	59.561	Neolamprologus_brichardi
ENSCVAG00000021038	scrt2	100	62.121	ENSONIG00000003152	-	100	61.442	Oreochromis_niloticus
ENSCVAG00000021038	scrt2	97	59.697	ENSONIG00000019809	-	100	59.697	Oreochromis_niloticus
ENSCVAG00000021038	scrt2	100	96.865	ENSONIG00000016758	scrt2	100	96.865	Oreochromis_niloticus
ENSCVAG00000021038	scrt2	97	64.839	ENSONIG00000006007	scrt1b	100	64.744	Oreochromis_niloticus
ENSCVAG00000021038	scrt2	99	56.928	ENSORLG00000022825	-	100	56.928	Oryzias_latipes
ENSCVAG00000021038	scrt2	100	96.238	ENSORLG00000024051	scrt2	100	96.238	Oryzias_latipes
ENSCVAG00000021038	scrt2	97	64.516	ENSORLG00000025651	scrt1b	96	64.516	Oryzias_latipes
ENSCVAG00000021038	scrt2	97	64.516	ENSORLG00020012967	scrt1b	96	64.516	Oryzias_latipes_hni
ENSCVAG00000021038	scrt2	100	96.238	ENSORLG00020011478	scrt2	100	96.238	Oryzias_latipes_hni
ENSCVAG00000021038	scrt2	97	64.516	ENSORLG00015019165	scrt1b	96	64.516	Oryzias_latipes_hsok
ENSCVAG00000021038	scrt2	100	96.238	ENSORLG00015005524	scrt2	100	96.238	Oryzias_latipes_hsok
ENSCVAG00000021038	scrt2	99	56.928	ENSORLG00015010104	-	100	56.928	Oryzias_latipes_hsok
ENSCVAG00000021038	scrt2	100	96.238	ENSOMEG00000002661	scrt2	100	96.238	Oryzias_melastigma
ENSCVAG00000021038	scrt2	97	64.516	ENSOMEG00000003925	scrt1b	96	64.516	Oryzias_melastigma
ENSCVAG00000021038	scrt2	99	58.663	ENSOMEG00000000286	-	100	58.663	Oryzias_melastigma
ENSCVAG00000021038	scrt2	97	67.314	ENSPKIG00000022303	SCRT1	97	67.314	Paramormyrops_kingsleyae
ENSCVAG00000021038	scrt2	97	65.696	ENSPKIG00000020085	scrt1a	97	65.696	Paramormyrops_kingsleyae
ENSCVAG00000021038	scrt2	100	77.812	ENSPMGG00000016561	scrt2	100	77.812	Periophthalmus_magnuspinnatus
ENSCVAG00000021038	scrt2	97	59.306	ENSPMGG00000021402	-	97	59.306	Periophthalmus_magnuspinnatus
ENSCVAG00000021038	scrt2	97	63.107	ENSPMGG00000002260	scrt1b	96	63.107	Periophthalmus_magnuspinnatus
ENSCVAG00000021038	scrt2	100	99.373	ENSPFOG00000007738	scrt2	100	99.373	Poecilia_formosa
ENSCVAG00000021038	scrt2	97	64.725	ENSPFOG00000017719	scrt1b	96	64.725	Poecilia_formosa
ENSCVAG00000021038	scrt2	99	58.537	ENSPFOG00000005616	-	100	58.537	Poecilia_formosa
ENSCVAG00000021038	scrt2	97	64.725	ENSPLAG00000009876	scrt1b	96	64.725	Poecilia_latipinna
ENSCVAG00000021038	scrt2	100	88.715	ENSPLAG00000005765	scrt2	100	88.715	Poecilia_latipinna
ENSCVAG00000021038	scrt2	99	58.537	ENSPLAG00000011718	-	100	58.537	Poecilia_latipinna
ENSCVAG00000021038	scrt2	97	64.725	ENSPMEG00000013274	scrt1b	96	64.725	Poecilia_mexicana
ENSCVAG00000021038	scrt2	100	88.715	ENSPMEG00000001538	scrt2	100	88.715	Poecilia_mexicana
ENSCVAG00000021038	scrt2	99	58.537	ENSPMEG00000011706	-	100	58.537	Poecilia_mexicana
ENSCVAG00000021038	scrt2	99	58.232	ENSPREG00000012166	-	100	58.232	Poecilia_reticulata
ENSCVAG00000021038	scrt2	97	64.725	ENSPREG00000018985	scrt1b	96	64.725	Poecilia_reticulata
ENSCVAG00000021038	scrt2	100	99.060	ENSPREG00000001147	scrt2	100	99.060	Poecilia_reticulata
ENSCVAG00000021038	scrt2	97	59.561	ENSPNYG00000008865	-	97	59.561	Pundamilia_nyererei
ENSCVAG00000021038	scrt2	100	84.639	ENSPNYG00000013109	scrt2	100	84.639	Pundamilia_nyererei
ENSCVAG00000021038	scrt2	97	64.194	ENSPNYG00000017733	scrt1b	96	64.194	Pundamilia_nyererei
ENSCVAG00000021038	scrt2	97	63.548	ENSPNAG00000027880	-	98	63.548	Pygocentrus_nattereri
ENSCVAG00000021038	scrt2	97	66.019	ENSPNAG00000017415	scrt1a	97	66.019	Pygocentrus_nattereri
ENSCVAG00000021038	scrt2	97	65.049	ENSSFOG00015001195	SCRT1	97	65.049	Scleropages_formosus
ENSCVAG00000021038	scrt2	97	58.514	ENSSMAG00000005122	-	97	58.514	Scophthalmus_maximus
ENSCVAG00000021038	scrt2	97	63.754	ENSSMAG00000019207	scrt1b	96	63.754	Scophthalmus_maximus
ENSCVAG00000021038	scrt2	97	59.561	ENSSDUG00000013215	-	97	59.561	Seriola_dumerili
ENSCVAG00000021038	scrt2	97	64.839	ENSSDUG00000007752	scrt1b	96	64.839	Seriola_dumerili
ENSCVAG00000021038	scrt2	97	90.584	ENSSDUG00000001637	scrt2	95	90.584	Seriola_dumerili
ENSCVAG00000021038	scrt2	97	64.839	ENSSLDG00000017166	scrt1b	96	64.839	Seriola_lalandi_dorsalis
ENSCVAG00000021038	scrt2	100	95.925	ENSSLDG00000013565	scrt2	100	95.925	Seriola_lalandi_dorsalis
ENSCVAG00000021038	scrt2	97	59.561	ENSSLDG00000016454	-	97	59.561	Seriola_lalandi_dorsalis
ENSCVAG00000021038	scrt2	97	62.258	ENSSPUG00000018637	SCRT2	97	62.258	Sphenodon_punctatus
ENSCVAG00000021038	scrt2	100	85.266	ENSSPAG00000014018	scrt2	100	85.266	Stegastes_partitus
ENSCVAG00000021038	scrt2	97	64.839	ENSSPAG00000002200	scrt1b	96	64.839	Stegastes_partitus
ENSCVAG00000021038	scrt2	97	59.561	ENSSPAG00000006788	-	97	59.561	Stegastes_partitus
ENSCVAG00000021038	scrt2	80	65.234	ENSTGUG00000006801	SCRT2	99	66.406	Taeniopygia_guttata
ENSCVAG00000021038	scrt2	99	88.365	ENSTRUG00000007620	scrt2	99	88.365	Takifugu_rubripes
ENSCVAG00000021038	scrt2	81	63.424	ENSTRUG00000019558	-	79	63.813	Takifugu_rubripes
ENSCVAG00000021038	scrt2	97	59.875	ENSTRUG00000012719	-	97	60.188	Takifugu_rubripes
ENSCVAG00000021038	scrt2	96	62.987	ENSTRUG00000011637	scrt1b	97	62.987	Takifugu_rubripes
ENSCVAG00000021038	scrt2	96	62.987	ENSTNIG00000018384	scrt1b	96	62.987	Tetraodon_nigroviridis
ENSCVAG00000021038	scrt2	99	93.082	ENSTNIG00000012473	scrt2	99	92.767	Tetraodon_nigroviridis
ENSCVAG00000021038	scrt2	100	92.790	ENSXCOG00000014367	scrt2	100	92.790	Xiphophorus_couchianus
ENSCVAG00000021038	scrt2	97	64.725	ENSXCOG00000019675	scrt1b	96	64.725	Xiphophorus_couchianus
ENSCVAG00000021038	scrt2	99	56.740	ENSXCOG00000019861	-	100	56.740	Xiphophorus_couchianus
ENSCVAG00000021038	scrt2	97	64.725	ENSXMAG00000027885	scrt1b	96	64.725	Xiphophorus_maculatus
ENSCVAG00000021038	scrt2	100	98.746	ENSXMAG00000028567	scrt2	100	98.746	Xiphophorus_maculatus
ENSCVAG00000021038	scrt2	99	58.232	ENSXMAG00000015353	-	100	58.232	Xiphophorus_maculatus