EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCVAG00000021184 (Gene tree)
Gene ID: 107098677
Gene Symbol: -
Alias: -
Full Name: uncharacterized LOC107098677
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Plus strand
Length: 22888 bases
Position: chrKL653300.1:259810-282697
Accession: 107098677
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000018014	FAM83	PF07894.12	2e-93	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000026832	-	6464	XM_015396462	ENSCVAP00000018014	898 (aa)	XP_015251948	UPI0007427024

Gene Model

Click here to download ENSCVAG00000021184's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000021184's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000021184	-	52	38.403	ENSAPOG00000020960	fam83b	55	38.403	Acanthochromis_polyacanthus
ENSCVAG00000021184	-	100	53.774	ENSAPOG00000022776	-	100	53.983	Acanthochromis_polyacanthus
ENSCVAG00000021184	-	52	38.550	ENSAOCG00000003874	fam83b	55	38.973	Amphiprion_ocellaris
ENSCVAG00000021184	-	100	53.040	ENSAOCG00000014940	-	100	53.249	Amphiprion_ocellaris
ENSCVAG00000021184	-	52	38.403	ENSAPEG00000017607	fam83b	55	38.636	Amphiprion_percula
ENSCVAG00000021184	-	84	44.154	ENSACLG00000011207	-	97	44.154	Astatotilapia_calliptera
ENSCVAG00000021184	-	99	47.639	ENSCSEG00000020558	-	99	47.954	Cynoglossus_semilaevis
ENSCVAG00000021184	-	50	41.717	ENSDARG00000078309	fam83b	54	41.717	Danio_rerio
ENSCVAG00000021184	-	99	62.352	ENSFHEG00000003030	-	99	62.352	Fundulus_heteroclitus
ENSCVAG00000021184	-	83	61.010	ENSGAFG00000018169	-	100	61.269	Gambusia_affinis
ENSCVAG00000021184	-	69	34.478	ENSHCOG00000015629	fam83b	81	34.478	Hippocampus_comes
ENSCVAG00000021184	-	98	51.459	ENSKMAG00000012648	-	100	51.459	Kryptolebias_marmoratus
ENSCVAG00000021184	-	100	49.478	ENSMAMG00000001957	-	100	50.104	Mastacembelus_armatus
ENSCVAG00000021184	-	100	48.945	ENSMZEG00005025928	-	100	48.945	Maylandia_zebra
ENSCVAG00000021184	-	98	45.364	ENSORLG00000000078	-	100	45.405	Oryzias_latipes
ENSCVAG00000021184	-	98	45.354	ENSORLG00020020616	-	100	45.395	Oryzias_latipes_hni
ENSCVAG00000021184	-	54	56.998	ENSORLG00015021055	-	87	56.836	Oryzias_latipes_hsok
ENSCVAG00000021184	-	100	64.270	ENSPFOG00000024637	-	100	64.270	Poecilia_formosa
ENSCVAG00000021184	-	100	64.379	ENSPMEG00000004818	-	100	64.379	Poecilia_mexicana
ENSCVAG00000021184	-	99	50.106	ENSSMAG00000021114	-	100	50.844	Scophthalmus_maximus
ENSCVAG00000021184	-	83	46.708	ENSSDUG00000013627	-	99	47.453	Seriola_dumerili
ENSCVAG00000021184	-	99	50.993	ENSSLDG00000017858	-	97	51.620	Seriola_lalandi_dorsalis
ENSCVAG00000021184	-	100	49.895	ENSSPAG00000010002	-	100	50.210	Stegastes_partitus
ENSCVAG00000021184	-	99	47.168	ENSTRUG00000022496	-	100	47.368	Takifugu_rubripes
ENSCVAG00000021184	-	100	63.952	ENSXMAG00000014414	-	100	63.952	Xiphophorus_maculatus