EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCVAG00000021349 (Gene tree)
Gene ID: 107096952
Gene Symbol: sf3a2
Alias: zgc:56097|zgc:77448
Full Name: splicing factor 3a subunit 2
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Plus strand
Length: 5486 bases
Position: chrKL653161.1:108418-113903
Accession: 107096952
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000031807	zf-met	PF12874.7	4.3e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000027015	-	1312	XM_015393872	ENSCVAP00000031807	294 (aa)	XP_015249358	UPI00074264C5

Gene Model

Click here to download ENSCVAG00000021349's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000021349's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000021349	sf3a2	73	95.833	ENSG00000104897	SF3A2	100	97.037	Homo_sapiens
ENSCVAG00000021349	sf3a2	83	93.004	ENSAPOG00000003916	sf3a2	99	92.542	Acanthochromis_polyacanthus
ENSCVAG00000021349	sf3a2	73	95.833	ENSAMEG00000005469	SF3A2	52	90.000	Ailuropoda_melanoleuca
ENSCVAG00000021349	sf3a2	81	94.561	ENSACIG00000018153	sf3a2	81	94.561	Amphilophus_citrinellus
ENSCVAG00000021349	sf3a2	83	93.416	ENSAOCG00000015960	sf3a2	99	92.881	Amphiprion_ocellaris
ENSCVAG00000021349	sf3a2	83	93.416	ENSAPEG00000012336	sf3a2	99	92.881	Amphiprion_percula
ENSCVAG00000021349	sf3a2	83	93.416	ENSATEG00000015449	sf3a2	88	92.664	Anabas_testudineus
ENSCVAG00000021349	sf3a2	63	95.676	ENSANAG00000034031	-	89	95.676	Aotus_nancymaae
ENSCVAG00000021349	sf3a2	88	91.892	ENSACLG00000002356	sf3a2	81	94.142	Astatotilapia_calliptera
ENSCVAG00000021349	sf3a2	83	91.803	ENSAMXG00000032428	sf3a2	80	91.770	Astyanax_mexicanus
ENSCVAG00000021349	sf3a2	73	95.833	ENSBTAG00000025452	SF3A2	50	90.000	Bos_taurus
ENSCVAG00000021349	sf3a2	75	79.091	WBGene00008683	repo-1	99	79.091	Caenorhabditis_elegans
ENSCVAG00000021349	sf3a2	73	95.833	ENSCJAG00000013206	-	52	90.000	Callithrix_jacchus
ENSCVAG00000021349	sf3a2	73	95.833	ENSCAFG00000019414	SF3A2	50	90.000	Canis_familiaris
ENSCVAG00000021349	sf3a2	73	95.833	ENSCAFG00020018153	SF3A2	50	90.000	Canis_lupus_dingo
ENSCVAG00000021349	sf3a2	73	95.833	ENSCHIG00000018323	SF3A2	50	90.000	Capra_hircus
ENSCVAG00000021349	sf3a2	62	96.703	ENSCAPG00000003402	-	90	96.703	Cavia_aperea
ENSCVAG00000021349	sf3a2	73	95.833	ENSCPOG00000032868	SF3A2	53	90.000	Cavia_porcellus
ENSCVAG00000021349	sf3a2	73	95.833	ENSCCAG00000009812	SF3A2	87	96.216	Cebus_capucinus
ENSCVAG00000021349	sf3a2	73	95.833	ENSCATG00000038453	SF3A2	52	90.000	Cercocebus_atys
ENSCVAG00000021349	sf3a2	73	95.833	ENSCLAG00000008987	SF3A2	53	90.000	Chinchilla_lanigera
ENSCVAG00000021349	sf3a2	73	95.833	ENSCSAG00000011717	SF3A2	51	90.000	Chlorocebus_sabaeus
ENSCVAG00000021349	sf3a2	77	93.333	ENSCPBG00000018569	SF3A2	76	89.627	Chrysemys_picta_bellii
ENSCVAG00000021349	sf3a2	73	86.512	ENSCING00000003319	zf(matrin)-2	62	86.512	Ciona_intestinalis
ENSCVAG00000021349	sf3a2	91	71.583	ENSCSAVG00000007862	-	57	86.047	Ciona_savignyi
ENSCVAG00000021349	sf3a2	73	95.833	ENSCANG00000024451	SF3A2	52	90.000	Colobus_angolensis_palliatus
ENSCVAG00000021349	sf3a2	73	95.833	ENSCGRG00000011089	Sf3a2	94	96.703	Cricetulus_griseus_crigri
ENSCVAG00000021349	sf3a2	88	91.154	ENSCSEG00000014308	sf3a2	90	90.698	Cynoglossus_semilaevis
ENSCVAG00000021349	sf3a2	83	92.593	ENSDARG00000021107	sf3a2	87	92.593	Danio_rerio
ENSCVAG00000021349	sf3a2	73	96.296	ENSDORG00000014445	Sf3a2	52	90.417	Dipodomys_ordii
ENSCVAG00000021349	sf3a2	73	83.796	FBgn0036314	Sf3a2	86	80.519	Drosophila_melanogaster
ENSCVAG00000021349	sf3a2	73	95.833	ENSEASG00005021972	SF3A2	52	90.000	Equus_asinus_asinus
ENSCVAG00000021349	sf3a2	82	92.116	ENSELUG00000008471	sf3a2	79	91.770	Esox_lucius
ENSCVAG00000021349	sf3a2	73	95.370	ENSFCAG00000030476	SF3A2	55	89.583	Felis_catus
ENSCVAG00000021349	sf3a2	64	95.722	ENSFALG00000013785	-	65	80.556	Ficedula_albicollis
ENSCVAG00000021349	sf3a2	62	96.703	ENSFDAG00000020911	-	93	96.703	Fukomys_damarensis
ENSCVAG00000021349	sf3a2	88	92.664	ENSFHEG00000002392	sf3a2	88	94.595	Fundulus_heteroclitus
ENSCVAG00000021349	sf3a2	82	93.776	ENSGMOG00000012186	sf3a2	81	93.416	Gadus_morhua
ENSCVAG00000021349	sf3a2	73	95.370	ENSGALG00000021679	SF3A2	83	85.115	Gallus_gallus
ENSCVAG00000021349	sf3a2	100	96.271	ENSGAFG00000008478	sf3a2	100	96.271	Gambusia_affinis
ENSCVAG00000021349	sf3a2	85	93.173	ENSGACG00000015255	sf3a2	88	92.578	Gasterosteus_aculeatus
ENSCVAG00000021349	sf3a2	61	92.179	ENSGAGG00000008500	SF3A2	72	87.692	Gopherus_agassizii
ENSCVAG00000021349	sf3a2	73	95.833	ENSGGOG00000006613	SF3A2	52	90.000	Gorilla_gorilla
ENSCVAG00000021349	sf3a2	88	91.892	ENSHBUG00000021796	sf3a2	81	94.142	Haplochromis_burtoni
ENSCVAG00000021349	sf3a2	73	95.833	ENSHGLG00000015102	SF3A2	88	96.721	Heterocephalus_glaber_female
ENSCVAG00000021349	sf3a2	73	95.833	ENSHGLG00100000418	SF3A2	88	96.721	Heterocephalus_glaber_male
ENSCVAG00000021349	sf3a2	90	89.434	ENSHCOG00000001223	sf3a2	88	91.016	Hippocampus_comes
ENSCVAG00000021349	sf3a2	83	90.535	ENSIPUG00000019071	sf3a2	81	90.535	Ictalurus_punctatus
ENSCVAG00000021349	sf3a2	73	95.833	ENSSTOG00000007495	SF3A2	90	89.071	Ictidomys_tridecemlineatus
ENSCVAG00000021349	sf3a2	73	95.833	ENSJJAG00000010635	Sf3a2	96	95.676	Jaculus_jaculus
ENSCVAG00000021349	sf3a2	85	93.976	ENSKMAG00000006295	sf3a2	81	95.021	Kryptolebias_marmoratus
ENSCVAG00000021349	sf3a2	88	91.506	ENSLBEG00000000677	sf3a2	88	92.278	Labrus_bergylta
ENSCVAG00000021349	sf3a2	73	95.833	ENSLACG00000008744	SF3A2	75	91.026	Latimeria_chalumnae
ENSCVAG00000021349	sf3a2	79	93.074	ENSLOCG00000005835	sf3a2	77	91.632	Lepisosteus_oculatus
ENSCVAG00000021349	sf3a2	73	95.833	ENSMFAG00000002638	SF3A2	52	90.000	Macaca_fascicularis
ENSCVAG00000021349	sf3a2	73	95.833	ENSMMUG00000010111	SF3A2	52	90.000	Macaca_mulatta
ENSCVAG00000021349	sf3a2	73	95.833	ENSMNEG00000036916	SF3A2	51	90.000	Macaca_nemestrina
ENSCVAG00000021349	sf3a2	83	92.593	ENSMAMG00000009881	sf3a2	88	91.506	Mastacembelus_armatus
ENSCVAG00000021349	sf3a2	88	91.892	ENSMZEG00005025609	sf3a2	81	94.142	Maylandia_zebra
ENSCVAG00000021349	sf3a2	73	95.370	ENSMGAG00000001950	SF3A2	83	85.115	Meleagris_gallopavo
ENSCVAG00000021349	sf3a2	62	96.703	ENSMAUG00000005644	-	94	96.703	Mesocricetus_auratus
ENSCVAG00000021349	sf3a2	73	95.833	ENSMICG00000015443	SF3A2	52	90.000	Microcebus_murinus
ENSCVAG00000021349	sf3a2	73	95.833	ENSMOCG00000007216	Sf3a2	52	90.000	Microtus_ochrogaster
ENSCVAG00000021349	sf3a2	94	82.609	ENSMMOG00000010657	sf3a2	93	83.398	Mola_mola
ENSCVAG00000021349	sf3a2	83	93.827	ENSMALG00000020442	sf3a2	88	92.664	Monopterus_albus
ENSCVAG00000021349	sf3a2	73	95.833	MGP_CAROLIEiJ_G0015602	-	94	96.703	Mus_caroli
ENSCVAG00000021349	sf3a2	73	95.833	ENSMUSG00000020211	Sf3a2	94	96.703	Mus_musculus
ENSCVAG00000021349	sf3a2	73	95.833	MGP_PahariEiJ_G0031015	-	94	96.703	Mus_pahari
ENSCVAG00000021349	sf3a2	73	95.833	MGP_SPRETEiJ_G0016420	-	94	96.703	Mus_spretus
ENSCVAG00000021349	sf3a2	73	95.370	ENSMPUG00000006956	SF3A2	52	89.583	Mustela_putorius_furo
ENSCVAG00000021349	sf3a2	73	95.370	ENSMLUG00000004426	-	54	89.583	Myotis_lucifugus
ENSCVAG00000021349	sf3a2	62	96.154	ENSNGAG00000023309	-	94	96.154	Nannospalax_galili
ENSCVAG00000021349	sf3a2	85	92.369	ENSNBRG00000019872	sf3a2	81	94.142	Neolamprologus_brichardi
ENSCVAG00000021349	sf3a2	64	94.652	ENSODEG00000013722	-	100	94.652	Octodon_degus
ENSCVAG00000021349	sf3a2	85	91.968	ENSONIG00000010198	sf3a2	81	94.142	Oreochromis_niloticus
ENSCVAG00000021349	sf3a2	70	94.634	ENSOANG00000013649	-	98	94.175	Ornithorhynchus_anatinus
ENSCVAG00000021349	sf3a2	91	92.135	ENSORLG00000015301	sf3a2	88	92.636	Oryzias_latipes
ENSCVAG00000021349	sf3a2	91	92.135	ENSORLG00020017235	sf3a2	88	92.636	Oryzias_latipes_hni
ENSCVAG00000021349	sf3a2	82	94.583	ENSORLG00015017116	sf3a2	88	91.860	Oryzias_latipes_hsok
ENSCVAG00000021349	sf3a2	82	94.167	ENSOMEG00000020860	sf3a2	88	91.473	Oryzias_melastigma
ENSCVAG00000021349	sf3a2	73	95.833	ENSOGAG00000033389	SF3A2	52	90.000	Otolemur_garnettii
ENSCVAG00000021349	sf3a2	73	95.833	ENSOARG00000014357	SF3A2	59	90.000	Ovis_aries
ENSCVAG00000021349	sf3a2	73	80.093	ENSPPAG00000037864	-	50	75.833	Pan_paniscus
ENSCVAG00000021349	sf3a2	73	95.370	ENSPPRG00000007798	SF3A2	51	89.583	Panthera_pardus
ENSCVAG00000021349	sf3a2	73	95.833	ENSPTRG00000010227	SF3A2	52	90.000	Pan_troglodytes
ENSCVAG00000021349	sf3a2	73	95.833	ENSPANG00000007949	SF3A2	52	90.000	Papio_anubis
ENSCVAG00000021349	sf3a2	83	91.358	ENSPKIG00000009487	sf3a2	77	91.358	Paramormyrops_kingsleyae
ENSCVAG00000021349	sf3a2	73	94.954	ENSPSIG00000010839	SF3A2	76	88.889	Pelodiscus_sinensis
ENSCVAG00000021349	sf3a2	73	97.685	ENSPMGG00000017249	sf3a2	83	94.167	Periophthalmus_magnuspinnatus
ENSCVAG00000021349	sf3a2	73	95.833	ENSPEMG00000021288	Sf3a2	52	90.000	Peromyscus_maniculatus_bairdii
ENSCVAG00000021349	sf3a2	83	96.296	ENSPFOG00000015945	sf3a2	88	94.208	Poecilia_formosa
ENSCVAG00000021349	sf3a2	83	95.885	ENSPLAG00000010052	sf3a2	88	93.822	Poecilia_latipinna
ENSCVAG00000021349	sf3a2	83	96.296	ENSPMEG00000000184	sf3a2	88	94.208	Poecilia_mexicana
ENSCVAG00000021349	sf3a2	83	95.885	ENSPREG00000017808	sf3a2	88	93.436	Poecilia_reticulata
ENSCVAG00000021349	sf3a2	73	95.833	ENSPPYG00000009342	SF3A2	53	90.000	Pongo_abelii
ENSCVAG00000021349	sf3a2	73	95.833	ENSPCOG00000020295	SF3A2	54	90.000	Propithecus_coquereli
ENSCVAG00000021349	sf3a2	88	91.892	ENSPNYG00000006928	sf3a2	81	94.142	Pundamilia_nyererei
ENSCVAG00000021349	sf3a2	83	91.770	ENSPNAG00000027582	sf3a2	80	91.770	Pygocentrus_nattereri
ENSCVAG00000021349	sf3a2	73	95.370	ENSRNOG00000019349	Sf3a2	51	89.583	Rattus_norvegicus
ENSCVAG00000021349	sf3a2	73	95.833	ENSRBIG00000026709	SF3A2	53	90.000	Rhinopithecus_bieti
ENSCVAG00000021349	sf3a2	73	95.833	ENSRROG00000034440	SF3A2	51	90.000	Rhinopithecus_roxellana
ENSCVAG00000021349	sf3a2	89	81.369	ENSSHAG00000011677	-	97	88.750	Sarcophilus_harrisii
ENSCVAG00000021349	sf3a2	65	85.417	ENSSHAG00000011646	-	77	79.630	Sarcophilus_harrisii
ENSCVAG00000021349	sf3a2	87	89.535	ENSSFOG00015010920	sf3a2	69	92.181	Scleropages_formosus
ENSCVAG00000021349	sf3a2	84	93.145	ENSSMAG00000002629	sf3a2	83	94.561	Scophthalmus_maximus
ENSCVAG00000021349	sf3a2	85	92.771	ENSSDUG00000015810	sf3a2	89	91.120	Seriola_dumerili
ENSCVAG00000021349	sf3a2	85	92.771	ENSSLDG00000010874	sf3a2	89	91.120	Seriola_lalandi_dorsalis
ENSCVAG00000021349	sf3a2	83	91.770	ENSSPAG00000004960	sf3a2	99	91.864	Stegastes_partitus
ENSCVAG00000021349	sf3a2	73	95.370	ENSSSCG00000039757	SF3A2	52	89.583	Sus_scrofa
ENSCVAG00000021349	sf3a2	70	95.122	ENSTGUG00000000305	SF3A2	100	95.122	Taeniopygia_guttata
ENSCVAG00000021349	sf3a2	81	92.887	ENSTRUG00000009045	sf3a2	90	88.931	Takifugu_rubripes
ENSCVAG00000021349	sf3a2	91	88.848	ENSTNIG00000015318	sf3a2	90	88.931	Tetraodon_nigroviridis
ENSCVAG00000021349	sf3a2	73	79.167	ENSTTRG00000010177	-	52	75.000	Tursiops_truncatus
ENSCVAG00000021349	sf3a2	73	95.833	ENSVVUG00000002578	SF3A2	50	90.000	Vulpes_vulpes
ENSCVAG00000021349	sf3a2	79	91.342	ENSXETG00000024943	sf3a2	56	91.342	Xenopus_tropicalis
ENSCVAG00000021349	sf3a2	82	96.266	ENSXCOG00000008222	sf3a2	88	95.367	Xiphophorus_couchianus
ENSCVAG00000021349	sf3a2	82	96.266	ENSXMAG00000029068	sf3a2	88	95.367	Xiphophorus_maculatus