EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCVAG00000021372 (Gene tree)
Gene ID: 107083833
Gene Symbol: parp1
Alias: si:dkey-206f10.3|wu:fc60f12|zgc:110092
Full Name: poly(ADP-ribose) polymerase 1
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Plus strand
Length: 20819 bases
Position: chrKL652504.1:2949757-2970575
Accession: 107083833
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000031778	PARP	PF00644.20	1.8e-74	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000026950	-	3722	XM_015373332	ENSCVAP00000031778	979 (aa)	XP_015228818	UPI0007425524

Gene Model

Click here to download ENSCVAG00000021372's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000021372's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCVAG00000021372	parp1	53	41.746	ENSCVAG00000000616	parp2	82	41.481
ENSCVAG00000021372	parp1	52	34.387	ENSCVAG00000001026	parp3	99	34.387

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000021372	parp1	99	69.746	ENSG00000143799	PARP1	99	69.746	Homo_sapiens
ENSCVAG00000021372	parp1	99	88.957	ENSAPOG00000006414	parp1	99	88.957	Acanthochromis_polyacanthus
ENSCVAG00000021372	parp1	99	69.200	ENSAMEG00000014451	PARP1	99	69.402	Ailuropoda_melanoleuca
ENSCVAG00000021372	parp1	99	89.468	ENSACIG00000005651	parp1	99	89.468	Amphilophus_citrinellus
ENSCVAG00000021372	parp1	99	90.184	ENSAOCG00000021005	parp1	99	90.184	Amphiprion_ocellaris
ENSCVAG00000021372	parp1	99	90.184	ENSAPEG00000004784	parp1	99	90.184	Amphiprion_percula
ENSCVAG00000021372	parp1	99	89.877	ENSATEG00000010457	parp1	99	89.877	Anabas_testudineus
ENSCVAG00000021372	parp1	90	73.499	ENSAPLG00000014039	PARP1	99	73.386	Anas_platyrhynchos
ENSCVAG00000021372	parp1	99	71.487	ENSACAG00000006189	PARP1	99	71.894	Anolis_carolinensis
ENSCVAG00000021372	parp1	99	69.746	ENSANAG00000032699	PARP1	99	70.355	Aotus_nancymaae
ENSCVAG00000021372	parp1	99	88.753	ENSACLG00000015489	parp1	99	88.650	Astatotilapia_calliptera
ENSCVAG00000021372	parp1	99	81.237	ENSAMXG00000006465	parp1	99	81.015	Astyanax_mexicanus
ENSCVAG00000021372	parp1	99	67.241	ENSBTAG00000000837	PARP1	99	67.647	Bos_taurus
ENSCVAG00000021372	parp1	82	44.223	WBGene00004049	parp-1	100	46.743	Caenorhabditis_elegans
ENSCVAG00000021372	parp1	99	69.137	ENSCJAG00000012831	PARP1	99	69.746	Callithrix_jacchus
ENSCVAG00000021372	parp1	99	68.539	ENSCAFG00000016089	PARP1	100	69.254	Canis_familiaris
ENSCVAG00000021372	parp1	99	68.832	ENSCAFG00020001660	PARP1	99	69.239	Canis_lupus_dingo
ENSCVAG00000021372	parp1	99	67.513	ENSCHIG00000018072	PARP1	99	68.053	Capra_hircus
ENSCVAG00000021372	parp1	94	71.073	ENSTSYG00000003699	PARP1	100	71.073	Carlito_syrichta
ENSCVAG00000021372	parp1	99	58.698	ENSCAPG00000011113	-	99	58.488	Cavia_aperea
ENSCVAG00000021372	parp1	99	69.309	ENSCPOG00000015643	-	99	69.309	Cavia_porcellus
ENSCVAG00000021372	parp1	99	69.949	ENSCCAG00000033484	PARP1	99	69.949	Cebus_capucinus
ENSCVAG00000021372	parp1	99	69.543	ENSCATG00000038981	PARP1	99	69.543	Cercocebus_atys
ENSCVAG00000021372	parp1	99	68.699	ENSCLAG00000006637	PARP1	99	68.699	Chinchilla_lanigera
ENSCVAG00000021372	parp1	64	78.125	ENSCHOG00000003539	PARP1	65	78.125	Choloepus_hoffmanni
ENSCVAG00000021372	parp1	99	72.403	ENSCPBG00000011958	PARP1	99	72.403	Chrysemys_picta_bellii
ENSCVAG00000021372	parp1	100	69.371	ENSCANG00000041340	PARP1	100	69.623	Colobus_angolensis_palliatus
ENSCVAG00000021372	parp1	99	69.207	ENSCGRG00001020559	Parp1	99	69.371	Cricetulus_griseus_chok1gshd
ENSCVAG00000021372	parp1	99	69.388	ENSCGRG00000004864	Parp1	100	69.552	Cricetulus_griseus_crigri
ENSCVAG00000021372	parp1	99	91.165	ENSCSEG00000020665	parp1	99	91.165	Cynoglossus_semilaevis
ENSCVAG00000021372	parp1	99	81.957	ENSDARG00000019529	parp1	99	82.041	Danio_rerio
ENSCVAG00000021372	parp1	99	68.507	ENSDNOG00000012059	PARP1	100	68.712	Dasypus_novemcinctus
ENSCVAG00000021372	parp1	99	68.469	ENSDORG00000005234	Parp1	100	68.673	Dipodomys_ordii
ENSCVAG00000021372	parp1	99	40.997	FBgn0010247	Parp	96	40.997	Drosophila_melanogaster
ENSCVAG00000021372	parp1	87	78.906	ENSETEG00000013254	PARP1	87	78.906	Echinops_telfairi
ENSCVAG00000021372	parp1	99	60.120	ENSEBUG00000005820	parp1	100	59.639	Eptatretus_burgeri
ENSCVAG00000021372	parp1	98	69.493	ENSEASG00005013275	PARP1	98	69.597	Equus_asinus_asinus
ENSCVAG00000021372	parp1	100	68.661	ENSECAG00000019207	PARP1	99	69.645	Equus_caballus
ENSCVAG00000021372	parp1	99	66.430	ENSEEUG00000012253	PARP1	99	66.465	Erinaceus_europaeus
ENSCVAG00000021372	parp1	97	83.054	ENSELUG00000017336	parp1	98	83.141	Esox_lucius
ENSCVAG00000021372	parp1	99	68.832	ENSFCAG00000005777	PARP1	99	69.402	Felis_catus
ENSCVAG00000021372	parp1	99	73.006	ENSFALG00000011578	PARP1	100	73.211	Ficedula_albicollis
ENSCVAG00000021372	parp1	99	68.776	ENSFDAG00000017662	PARP1	100	68.603	Fukomys_damarensis
ENSCVAG00000021372	parp1	99	92.638	ENSFHEG00000001117	parp1	99	92.638	Fundulus_heteroclitus
ENSCVAG00000021372	parp1	99	82.281	ENSGMOG00000014929	parp1	99	82.281	Gadus_morhua
ENSCVAG00000021372	parp1	99	73.116	ENSGALG00000009228	PARP1	99	72.912	Gallus_gallus
ENSCVAG00000021372	parp1	99	93.763	ENSGAFG00000010450	parp1	99	93.763	Gambusia_affinis
ENSCVAG00000021372	parp1	99	87.653	ENSGACG00000011280	parp1	99	87.653	Gasterosteus_aculeatus
ENSCVAG00000021372	parp1	99	71.894	ENSGAGG00000010066	PARP1	99	70.880	Gopherus_agassizii
ENSCVAG00000021372	parp1	99	69.543	ENSGGOG00000006308	PARP1	99	69.543	Gorilla_gorilla
ENSCVAG00000021372	parp1	99	89.571	ENSHBUG00000010490	parp1	99	89.571	Haplochromis_burtoni
ENSCVAG00000021372	parp1	99	68.496	ENSHGLG00000003992	PARP1	93	68.496	Heterocephalus_glaber_female
ENSCVAG00000021372	parp1	99	68.496	ENSHGLG00100016965	PARP1	93	68.496	Heterocephalus_glaber_male
ENSCVAG00000021372	parp1	99	85.046	ENSHCOG00000011619	parp1	99	85.554	Hippocampus_comes
ENSCVAG00000021372	parp1	99	81.073	ENSIPUG00000020250	parp1	99	81.073	Ictalurus_punctatus
ENSCVAG00000021372	parp1	99	69.543	ENSSTOG00000016000	PARP1	99	69.543	Ictidomys_tridecemlineatus
ENSCVAG00000021372	parp1	99	68.699	ENSJJAG00000023497	Parp1	99	68.718	Jaculus_jaculus
ENSCVAG00000021372	parp1	99	90.389	ENSKMAG00000011627	parp1	99	90.389	Kryptolebias_marmoratus
ENSCVAG00000021372	parp1	99	88.855	ENSLBEG00000013376	parp1	99	88.855	Labrus_bergylta
ENSCVAG00000021372	parp1	99	56.193	ENSLACG00000002735	PARP1	99	56.738	Latimeria_chalumnae
ENSCVAG00000021372	parp1	99	78.980	ENSLOCG00000015798	parp1	99	78.980	Lepisosteus_oculatus
ENSCVAG00000021372	parp1	99	68.126	ENSLAFG00000007830	PARP1	100	68.737	Loxodonta_africana
ENSCVAG00000021372	parp1	99	69.543	ENSMFAG00000002526	PARP1	99	69.543	Macaca_fascicularis
ENSCVAG00000021372	parp1	99	69.645	ENSMMUG00000021820	PARP1	99	69.645	Macaca_mulatta
ENSCVAG00000021372	parp1	99	69.543	ENSMNEG00000034074	PARP1	99	69.543	Macaca_nemestrina
ENSCVAG00000021372	parp1	99	67.713	ENSMLEG00000012344	PARP1	99	67.713	Mandrillus_leucophaeus
ENSCVAG00000021372	parp1	99	89.162	ENSMAMG00000020652	parp1	99	89.162	Mastacembelus_armatus
ENSCVAG00000021372	parp1	99	89.673	ENSMZEG00005016907	parp1	99	89.673	Maylandia_zebra
ENSCVAG00000021372	parp1	99	73.081	ENSMGAG00000007760	PARP1	100	72.979	Meleagris_gallopavo
ENSCVAG00000021372	parp1	99	69.106	ENSMAUG00000008306	Parp1	99	69.168	Mesocricetus_auratus
ENSCVAG00000021372	parp1	99	66.193	ENSMICG00000017076	PARP1	99	65.657	Microcebus_murinus
ENSCVAG00000021372	parp1	99	68.801	ENSMOCG00000014315	Parp1	99	68.661	Microtus_ochrogaster
ENSCVAG00000021372	parp1	99	87.996	ENSMMOG00000015966	parp1	99	87.602	Mola_mola
ENSCVAG00000021372	parp1	99	70.193	ENSMODG00000006076	PARP1	99	69.685	Monodelphis_domestica
ENSCVAG00000021372	parp1	99	86.605	ENSMALG00000004057	parp1	99	86.605	Monopterus_albus
ENSCVAG00000021372	parp1	99	69.200	MGP_CAROLIEiJ_G0014978	Parp1	100	78.571	Mus_caroli
ENSCVAG00000021372	parp1	99	69.098	ENSMUSG00000026496	Parp1	99	78.571	Mus_musculus
ENSCVAG00000021372	parp1	99	69.098	MGP_SPRETEiJ_G0015777	Parp1	100	78.571	Mus_spretus
ENSCVAG00000021372	parp1	99	68.997	ENSMPUG00000004585	PARP1	99	69.137	Mustela_putorius_furo
ENSCVAG00000021372	parp1	79	76.047	ENSMLUG00000012285	PARP1	82	76.047	Myotis_lucifugus
ENSCVAG00000021372	parp1	99	68.053	ENSNGAG00000003885	Parp1	99	68.560	Nannospalax_galili
ENSCVAG00000021372	parp1	99	88.548	ENSNBRG00000017434	parp1	99	88.446	Neolamprologus_brichardi
ENSCVAG00000021372	parp1	95	76.471	ENSNLEG00000013905	PARP1	99	76.471	Nomascus_leucogenys
ENSCVAG00000021372	parp1	69	80.299	ENSMEUG00000007720	PARP1	87	80.299	Notamacropus_eugenii
ENSCVAG00000021372	parp1	99	70.051	ENSOPRG00000011722	PARP1	99	69.960	Ochotona_princeps
ENSCVAG00000021372	parp1	99	67.886	ENSODEG00000007424	PARP1	99	68.293	Octodon_degus
ENSCVAG00000021372	parp1	99	89.264	ENSONIG00000013486	parp1	99	89.264	Oreochromis_niloticus
ENSCVAG00000021372	parp1	99	71.910	ENSOANG00000001488	PARP1	100	71.939	Ornithorhynchus_anatinus
ENSCVAG00000021372	parp1	99	69.777	ENSOCUG00000017820	PARP1	99	70.111	Oryctolagus_cuniculus
ENSCVAG00000021372	parp1	99	88.446	ENSORLG00000013691	parp1	99	88.446	Oryzias_latipes
ENSCVAG00000021372	parp1	100	88.560	ENSORLG00020001074	parp1	99	88.560	Oryzias_latipes_hni
ENSCVAG00000021372	parp1	99	88.446	ENSORLG00015007090	parp1	99	88.446	Oryzias_latipes_hsok
ENSCVAG00000021372	parp1	99	69.543	ENSOGAG00000016206	PARP1	99	69.036	Otolemur_garnettii
ENSCVAG00000021372	parp1	99	67.444	ENSOARG00000000811	PARP1	99	68.154	Ovis_aries
ENSCVAG00000021372	parp1	99	69.340	ENSPPAG00000040862	PARP1	99	69.340	Pan_paniscus
ENSCVAG00000021372	parp1	99	69.011	ENSPPRG00000003528	PARP1	100	69.176	Panthera_pardus
ENSCVAG00000021372	parp1	97	58.325	ENSPTIG00000009102	PARP1	98	58.193	Panthera_tigris_altaica
ENSCVAG00000021372	parp1	99	69.340	ENSPTRG00000002049	PARP1	99	69.340	Pan_troglodytes
ENSCVAG00000021372	parp1	99	69.675	ENSPANG00000011198	PARP1	99	69.675	Papio_anubis
ENSCVAG00000021372	parp1	99	81.006	ENSPKIG00000006039	parp1	100	81.006	Paramormyrops_kingsleyae
ENSCVAG00000021372	parp1	99	71.821	ENSPSIG00000016374	PARP1	100	71.690	Pelodiscus_sinensis
ENSCVAG00000021372	parp1	100	83.282	ENSPMGG00000008936	parp1	99	83.282	Periophthalmus_magnuspinnatus
ENSCVAG00000021372	parp1	99	69.270	ENSPEMG00000020230	Parp1	99	68.966	Peromyscus_maniculatus_bairdii
ENSCVAG00000021372	parp1	99	69.817	ENSPCIG00000006436	PARP1	99	69.715	Phascolarctos_cinereus
ENSCVAG00000021372	parp1	99	91.718	ENSPFOG00000002342	parp1	99	91.718	Poecilia_formosa
ENSCVAG00000021372	parp1	99	93.456	ENSPLAG00000000909	parp1	99	93.456	Poecilia_latipinna
ENSCVAG00000021372	parp1	99	93.763	ENSPMEG00000013979	parp1	99	93.763	Poecilia_mexicana
ENSCVAG00000021372	parp1	99	93.047	ENSPREG00000001114	parp1	99	93.047	Poecilia_reticulata
ENSCVAG00000021372	parp1	99	69.765	ENSPPYG00000000164	PARP1	100	69.765	Pongo_abelii
ENSCVAG00000021372	parp1	58	79.321	ENSPCAG00000005558	-	56	79.321	Procavia_capensis
ENSCVAG00000021372	parp1	99	69.137	ENSPCOG00000016918	PARP1	99	69.949	Propithecus_coquereli
ENSCVAG00000021372	parp1	85	78.302	ENSPVAG00000005543	PARP1	82	78.302	Pteropus_vampyrus
ENSCVAG00000021372	parp1	99	88.753	ENSPNYG00000009702	parp1	99	88.650	Pundamilia_nyererei
ENSCVAG00000021372	parp1	99	82.335	ENSPNAG00000002787	parp1	99	82.944	Pygocentrus_nattereri
ENSCVAG00000021372	parp1	99	69.137	ENSRNOG00000003084	Parp1	99	69.402	Rattus_norvegicus
ENSCVAG00000021372	parp1	99	69.543	ENSRBIG00000044893	PARP1	99	71.599	Rhinopithecus_bieti
ENSCVAG00000021372	parp1	99	69.543	ENSRROG00000029280	PARP1	99	71.599	Rhinopithecus_roxellana
ENSCVAG00000021372	parp1	99	52.599	ENSRROG00000040615	-	97	60.260	Rhinopithecus_roxellana
ENSCVAG00000021372	parp1	99	70.254	ENSSBOG00000010144	PARP1	99	70.254	Saimiri_boliviensis_boliviensis
ENSCVAG00000021372	parp1	99	70.654	ENSSHAG00000001991	PARP1	100	70.654	Sarcophilus_harrisii
ENSCVAG00000021372	parp1	99	81.161	ENSSFOG00015020017	parp1	99	81.263	Scleropages_formosus
ENSCVAG00000021372	parp1	99	87.935	ENSSMAG00000013799	parp1	99	87.935	Scophthalmus_maximus
ENSCVAG00000021372	parp1	99	90.082	ENSSDUG00000016626	parp1	99	90.082	Seriola_dumerili
ENSCVAG00000021372	parp1	99	90.082	ENSSLDG00000006384	parp1	99	90.082	Seriola_lalandi_dorsalis
ENSCVAG00000021372	parp1	55	77.083	ENSSARG00000009436	-	59	77.083	Sorex_araneus
ENSCVAG00000021372	parp1	99	68.400	ENSSPUG00000007790	PARP1	99	68.400	Sphenodon_punctatus
ENSCVAG00000021372	parp1	99	86.299	ENSSPAG00000019074	parp1	99	89.586	Stegastes_partitus
ENSCVAG00000021372	parp1	99	68.934	ENSSSCG00000023660	PARP1	99	69.543	Sus_scrofa
ENSCVAG00000021372	parp1	92	72.315	ENSTGUG00000004260	-	99	72.536	Taeniopygia_guttata
ENSCVAG00000021372	parp1	99	86.939	ENSTRUG00000014490	parp1	99	86.939	Takifugu_rubripes
ENSCVAG00000021372	parp1	99	85.223	ENSTNIG00000016384	parp1	99	85.223	Tetraodon_nigroviridis
ENSCVAG00000021372	parp1	85	77.059	ENSTBEG00000002364	PARP1	92	77.059	Tupaia_belangeri
ENSCVAG00000021372	parp1	99	63.959	ENSTTRG00000000188	PARP1	99	64.670	Tursiops_truncatus
ENSCVAG00000021372	parp1	99	69.450	ENSUAMG00000014388	PARP1	100	69.654	Ursus_americanus
ENSCVAG00000021372	parp1	99	62.690	ENSUMAG00000014555	PARP1	99	63.195	Ursus_maritimus
ENSCVAG00000021372	parp1	83	79.216	ENSVPAG00000011411	PARP1	82	79.216	Vicugna_pacos
ENSCVAG00000021372	parp1	99	68.437	ENSVVUG00000001655	PARP1	100	69.254	Vulpes_vulpes
ENSCVAG00000021372	parp1	99	71.136	ENSXETG00000022610	parp1	97	70.931	Xenopus_tropicalis
ENSCVAG00000021372	parp1	99	93.047	ENSXMAG00000003632	parp1	99	93.047	Xiphophorus_maculatus