EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCVAG00000021470 (Gene tree)
Gene ID: 107088482
Gene Symbol: ino80
Alias: si:ch211-244p18.3
Full Name: INO80 complex subunit
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Minus strand
Length: 46184 bases
Position: chrKL652719.1:655179-701362
Accession: 107088482
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000018237	ResIII	PF04851.15	5.4e-09	1	1
ENSCVAP00000031870	ResIII	PF04851.15	5.4e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000027146	-	6260	XM_015380680	ENSCVAP00000031870	1564 (aa)	XP_015236166	UPI0007428B5E
ENSCVAT00000027122	-	6229	XM_015380681	ENSCVAP00000018237	1564 (aa)	XP_015236167	UPI0007428B5E

Gene Model

Click here to download ENSCVAG00000021470's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000021470's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000021470	ino80	97	74.269	ENSG00000128908	INO80	90	82.022	Homo_sapiens
ENSCVAG00000021470	ino80	73	84.595	ENSAPOG00000012586	ino80	99	84.508	Acanthochromis_polyacanthus
ENSCVAG00000021470	ino80	97	74.206	ENSAMEG00000016796	INO80	97	73.988	Ailuropoda_melanoleuca
ENSCVAG00000021470	ino80	91	86.134	ENSACIG00000001918	ino80	95	86.134	Amphilophus_citrinellus
ENSCVAG00000021470	ino80	99	88.860	ENSAOCG00000000490	ino80	98	89.040	Amphiprion_ocellaris
ENSCVAG00000021470	ino80	99	88.988	ENSAPEG00000022911	ino80	98	89.170	Amphiprion_percula
ENSCVAG00000021470	ino80	99	87.772	ENSATEG00000001271	ino80	98	88.003	Anabas_testudineus
ENSCVAG00000021470	ino80	97	75.049	ENSAPLG00000013656	INO80	97	74.742	Anas_platyrhynchos
ENSCVAG00000021470	ino80	91	73.402	ENSACAG00000003531	INO80	99	73.347	Anolis_carolinensis
ENSCVAG00000021470	ino80	97	74.108	ENSANAG00000032223	INO80	97	73.759	Aotus_nancymaae
ENSCVAG00000021470	ino80	91	84.156	ENSACLG00000006610	ino80	96	84.156	Astatotilapia_calliptera
ENSCVAG00000021470	ino80	97	73.837	ENSBTAG00000010380	INO80	97	73.752	Bos_taurus
ENSCVAG00000021470	ino80	97	74.221	ENSCJAG00000020770	-	97	73.806	Callithrix_jacchus
ENSCVAG00000021470	ino80	97	74.060	ENSCAFG00000009492	INO80	97	73.972	Canis_familiaris
ENSCVAG00000021470	ino80	70	70.311	ENSCAFG00020005524	-	98	70.505	Canis_lupus_dingo
ENSCVAG00000021470	ino80	97	74.076	ENSCHIG00000010246	INO80	97	73.752	Capra_hircus
ENSCVAG00000021470	ino80	97	74.497	ENSTSYG00000003252	INO80	97	74.146	Carlito_syrichta
ENSCVAG00000021470	ino80	97	73.766	ENSCPOG00000011386	INO80	97	74.000	Cavia_porcellus
ENSCVAG00000021470	ino80	97	74.221	ENSCCAG00000030680	INO80	97	73.806	Cebus_capucinus
ENSCVAG00000021470	ino80	97	74.334	ENSCATG00000040663	INO80	97	73.919	Cercocebus_atys
ENSCVAG00000021470	ino80	97	74.221	ENSCLAG00000008397	INO80	97	74.258	Chinchilla_lanigera
ENSCVAG00000021470	ino80	97	74.464	ENSCSAG00000007632	INO80	97	74.048	Chlorocebus_sabaeus
ENSCVAG00000021470	ino80	64	76.558	ENSCHOG00000011938	INO80	76	76.418	Choloepus_hoffmanni
ENSCVAG00000021470	ino80	96	74.641	ENSCPBG00000013491	INO80	97	74.516	Chrysemys_picta_bellii
ENSCVAG00000021470	ino80	97	70.143	ENSCANG00000036208	INO80	97	69.176	Colobus_angolensis_palliatus
ENSCVAG00000021470	ino80	100	72.567	ENSCGRG00001013566	Ino80	97	73.952	Cricetulus_griseus_chok1gshd
ENSCVAG00000021470	ino80	100	72.567	ENSCGRG00000001290	Ino80	97	73.952	Cricetulus_griseus_crigri
ENSCVAG00000021470	ino80	91	81.787	ENSCSEG00000019370	ino80	96	81.344	Cynoglossus_semilaevis
ENSCVAG00000021470	ino80	100	78.761	ENSDARG00000070432	ino80	98	77.634	Danio_rerio
ENSCVAG00000021470	ino80	100	73.132	ENSDNOG00000010267	INO80	97	74.081	Dasypus_novemcinctus
ENSCVAG00000021470	ino80	60	63.509	ENSEBUG00000001921	ino80	95	62.924	Eptatretus_burgeri
ENSCVAG00000021470	ino80	97	74.141	ENSEASG00005016405	INO80	97	73.924	Equus_asinus_asinus
ENSCVAG00000021470	ino80	91	78.307	ENSELUG00000001071	ino80	93	78.531	Esox_lucius
ENSCVAG00000021470	ino80	97	74.141	ENSFCAG00000014722	INO80	97	73.924	Felis_catus
ENSCVAG00000021470	ino80	97	74.286	ENSFALG00000006125	INO80	91	74.588	Ficedula_albicollis
ENSCVAG00000021470	ino80	97	73.671	ENSFDAG00000005624	INO80	97	73.905	Fukomys_damarensis
ENSCVAG00000021470	ino80	60	91.279	ENSFHEG00000020436	ino80	88	91.279	Fundulus_heteroclitus
ENSCVAG00000021470	ino80	87	82.107	ENSGMOG00000006031	ino80	99	81.602	Gadus_morhua
ENSCVAG00000021470	ino80	97	74.658	ENSGALG00000008553	INO80	97	74.354	Gallus_gallus
ENSCVAG00000021470	ino80	99	91.496	ENSGAFG00000006358	ino80	98	91.780	Gambusia_affinis
ENSCVAG00000021470	ino80	99	84.828	ENSGACG00000012960	ino80	98	84.952	Gasterosteus_aculeatus
ENSCVAG00000021470	ino80	93	74.157	ENSGAGG00000019203	INO80	94	74.637	Gopherus_agassizii
ENSCVAG00000021470	ino80	92	87.680	ENSHBUG00000022614	ino80	95	87.815	Haplochromis_burtoni
ENSCVAG00000021470	ino80	100	72.693	ENSHGLG00000018136	INO80	97	73.952	Heterocephalus_glaber_female
ENSCVAG00000021470	ino80	100	72.128	ENSHGLG00100006571	INO80	91	73.916	Heterocephalus_glaber_male
ENSCVAG00000021470	ino80	99	82.462	ENSHCOG00000002445	ino80	98	83.420	Hippocampus_comes
ENSCVAG00000021470	ino80	94	78.062	ENSIPUG00000018905	ino80	95	79.420	Ictalurus_punctatus
ENSCVAG00000021470	ino80	100	72.585	ENSSTOG00000000427	INO80	97	73.905	Ictidomys_tridecemlineatus
ENSCVAG00000021470	ino80	100	68.491	ENSJJAG00000016166	Ino80	97	69.394	Jaculus_jaculus
ENSCVAG00000021470	ino80	91	84.482	ENSKMAG00000019273	ino80	94	85.038	Kryptolebias_marmoratus
ENSCVAG00000021470	ino80	91	84.407	ENSLBEG00000024288	ino80	95	83.414	Labrus_bergylta
ENSCVAG00000021470	ino80	98	68.582	ENSLACG00000008666	INO80	99	66.816	Latimeria_chalumnae
ENSCVAG00000021470	ino80	99	79.222	ENSLOCG00000012304	ino80	96	80.092	Lepisosteus_oculatus
ENSCVAG00000021470	ino80	100	73.116	ENSLAFG00000009951	INO80	97	74.000	Loxodonta_africana
ENSCVAG00000021470	ino80	97	74.464	ENSMFAG00000044488	INO80	97	74.048	Macaca_fascicularis
ENSCVAG00000021470	ino80	97	74.464	ENSMMUG00000001737	INO80	97	74.048	Macaca_mulatta
ENSCVAG00000021470	ino80	97	74.464	ENSMNEG00000034906	INO80	97	74.048	Macaca_nemestrina
ENSCVAG00000021470	ino80	97	74.464	ENSMLEG00000042117	INO80	97	74.048	Mandrillus_leucophaeus
ENSCVAG00000021470	ino80	71	76.586	ENSMAMG00000013786	ino80	99	76.229	Mastacembelus_armatus
ENSCVAG00000021470	ino80	91	87.344	ENSMZEG00005013146	ino80	96	87.344	Maylandia_zebra
ENSCVAG00000021470	ino80	84	75.169	ENSMGAG00000011164	INO80	99	75.113	Meleagris_gallopavo
ENSCVAG00000021470	ino80	100	71.249	ENSMAUG00000020670	Ino80	97	72.856	Mesocricetus_auratus
ENSCVAG00000021470	ino80	100	72.567	ENSMICG00000005801	INO80	97	73.436	Microcebus_murinus
ENSCVAG00000021470	ino80	100	72.505	ENSMOCG00000016879	Ino80	97	73.888	Microtus_ochrogaster
ENSCVAG00000021470	ino80	70	76.247	ENSMMOG00000015046	ino80	99	76.428	Mola_mola
ENSCVAG00000021470	ino80	100	73.602	ENSMODG00000000184	INO80	97	74.356	Monodelphis_domestica
ENSCVAG00000021470	ino80	91	83.276	ENSMALG00000016488	ino80	94	83.506	Monopterus_albus
ENSCVAG00000021470	ino80	100	70.407	MGP_CAROLIEiJ_G0024144	Ino80	97	72.025	Mus_caroli
ENSCVAG00000021470	ino80	100	72.316	ENSMUSG00000034154	Ino80	97	74.017	Mus_musculus
ENSCVAG00000021470	ino80	100	72.299	MGP_PahariEiJ_G0025587	Ino80	97	74.017	Mus_pahari
ENSCVAG00000021470	ino80	100	72.379	MGP_SPRETEiJ_G0025060	Ino80	97	74.017	Mus_spretus
ENSCVAG00000021470	ino80	97	74.271	ENSMPUG00000008786	INO80	97	74.053	Mustela_putorius_furo
ENSCVAG00000021470	ino80	97	73.806	ENSMLUG00000017764	INO80	97	73.465	Myotis_lucifugus
ENSCVAG00000021470	ino80	100	72.494	ENSNGAG00000019497	Ino80	97	73.810	Nannospalax_galili
ENSCVAG00000021470	ino80	90	81.761	ENSNBRG00000022086	ino80	95	81.761	Neolamprologus_brichardi
ENSCVAG00000021470	ino80	97	72.485	ENSNLEG00000003454	INO80	97	72.083	Nomascus_leucogenys
ENSCVAG00000021470	ino80	77	63.700	ENSOPRG00000000831	INO80	77	62.916	Ochotona_princeps
ENSCVAG00000021470	ino80	97	74.089	ENSODEG00000016734	INO80	97	73.952	Octodon_degus
ENSCVAG00000021470	ino80	99	88.476	ENSONIG00000000772	ino80	98	88.716	Oreochromis_niloticus
ENSCVAG00000021470	ino80	100	73.132	ENSOCUG00000010763	INO80	97	73.952	Oryctolagus_cuniculus
ENSCVAG00000021470	ino80	99	83.057	ENSORLG00000018028	ino80	99	83.951	Oryzias_latipes
ENSCVAG00000021470	ino80	99	83.312	ENSORLG00015012507	ino80	99	84.016	Oryzias_latipes_hsok
ENSCVAG00000021470	ino80	99	84.140	ENSOMEG00000003791	ino80	98	84.665	Oryzias_melastigma
ENSCVAG00000021470	ino80	100	73.200	ENSOGAG00000008998	INO80	97	74.065	Otolemur_garnettii
ENSCVAG00000021470	ino80	97	73.691	ENSOARG00000020323	INO80	97	73.607	Ovis_aries
ENSCVAG00000021470	ino80	97	74.334	ENSPPAG00000042104	INO80	97	73.919	Pan_paniscus
ENSCVAG00000021470	ino80	97	74.141	ENSPPRG00000011011	INO80	97	73.924	Panthera_pardus
ENSCVAG00000021470	ino80	97	73.882	ENSPTIG00000005911	INO80	97	73.667	Panthera_tigris_altaica
ENSCVAG00000021470	ino80	97	74.334	ENSPTRG00000006939	INO80	97	73.919	Pan_troglodytes
ENSCVAG00000021470	ino80	97	74.464	ENSPANG00000019131	INO80	97	74.048	Papio_anubis
ENSCVAG00000021470	ino80	98	78.618	ENSPKIG00000021450	ino80	99	77.821	Paramormyrops_kingsleyae
ENSCVAG00000021470	ino80	96	74.526	ENSPSIG00000014403	INO80	97	74.371	Pelodiscus_sinensis
ENSCVAG00000021470	ino80	73	70.275	ENSPEMG00000013114	-	99	70.962	Peromyscus_maniculatus_bairdii
ENSCVAG00000021470	ino80	100	73.664	ENSPCIG00000027848	INO80	97	74.420	Phascolarctos_cinereus
ENSCVAG00000021470	ino80	98	89.833	ENSPFOG00000013082	ino80	98	89.858	Poecilia_formosa
ENSCVAG00000021470	ino80	59	89.091	ENSPMEG00000021422	ino80	87	89.091	Poecilia_mexicana
ENSCVAG00000021470	ino80	91	90.370	ENSPREG00000013650	ino80	94	90.021	Poecilia_reticulata
ENSCVAG00000021470	ino80	96	72.656	ENSPPYG00000006368	INO80	97	72.248	Pongo_abelii
ENSCVAG00000021470	ino80	100	71.922	ENSPCOG00000022332	INO80	97	72.645	Propithecus_coquereli
ENSCVAG00000021470	ino80	97	71.912	ENSPVAG00000001852	INO80	97	72.158	Pteropus_vampyrus
ENSCVAG00000021470	ino80	90	84.529	ENSPNYG00000002995	ino80	95	84.377	Pundamilia_nyererei
ENSCVAG00000021470	ino80	100	80.519	ENSPNAG00000010386	ino80	98	79.223	Pygocentrus_nattereri
ENSCVAG00000021470	ino80	97	73.199	ENSRNOG00000014483	Ino80	97	73.565	Rattus_norvegicus
ENSCVAG00000021470	ino80	97	74.464	ENSRBIG00000031765	INO80	97	74.048	Rhinopithecus_bieti
ENSCVAG00000021470	ino80	97	74.464	ENSRROG00000033143	INO80	97	74.048	Rhinopithecus_roxellana
ENSCVAG00000021470	ino80	94	76.576	ENSSBOG00000023493	INO80	97	76.030	Saimiri_boliviensis_boliviensis
ENSCVAG00000021470	ino80	100	73.350	ENSSHAG00000016349	INO80	97	74.098	Sarcophilus_harrisii
ENSCVAG00000021470	ino80	97	79.148	ENSSFOG00015000183	ino80	98	79.672	Scleropages_formosus
ENSCVAG00000021470	ino80	99	87.309	ENSSMAG00000007221	ino80	98	87.597	Scophthalmus_maximus
ENSCVAG00000021470	ino80	99	89.117	ENSSDUG00000009957	ino80	98	89.429	Seriola_dumerili
ENSCVAG00000021470	ino80	99	86.508	ENSSLDG00000000389	ino80	82	91.109	Seriola_lalandi_dorsalis
ENSCVAG00000021470	ino80	97	71.614	ENSSARG00000007876	INO80	97	71.355	Sorex_araneus
ENSCVAG00000021470	ino80	91	84.170	ENSSPAG00000007779	ino80	93	83.207	Stegastes_partitus
ENSCVAG00000021470	ino80	97	73.579	ENSSSCG00000004753	INO80	98	73.329	Sus_scrofa
ENSCVAG00000021470	ino80	97	74.351	ENSTGUG00000010786	INO80	91	74.638	Taeniopygia_guttata
ENSCVAG00000021470	ino80	91	86.042	ENSTRUG00000013026	ino80	95	86.528	Takifugu_rubripes
ENSCVAG00000021470	ino80	100	71.716	ENSTTRG00000011479	INO80	97	72.569	Tursiops_truncatus
ENSCVAG00000021470	ino80	73	70.462	ENSUMAG00000012190	-	99	70.648	Ursus_maritimus
ENSCVAG00000021470	ino80	100	67.630	ENSVPAG00000002838	INO80	97	68.255	Vicugna_pacos
ENSCVAG00000021470	ino80	97	74.060	ENSVVUG00000026698	INO80	97	73.972	Vulpes_vulpes
ENSCVAG00000021470	ino80	98	66.388	ENSXETG00000034272	INO80	98	66.068	Xenopus_tropicalis
ENSCVAG00000021470	ino80	91	90.719	ENSXMAG00000006742	ino80	93	90.370	Xiphophorus_maculatus