EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCVAG00000021558 (Gene tree)
Gene ID: 107093554
Gene Symbol: ssb
Alias: wu:fb17f11
Full Name: Sjogren syndrome antigen B
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Minus strand
Length: 10678 bases
Position: chrKL652932.1:288867-299544
Accession: 107093554
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000031921	RRM_1	PF00076.22	2.3e-13	1	1
ENSCVAP00000031921	RRM_3	PF08777.11	8.6e-27	1	1
ENSCVAP00000031921	La	PF05383.17	8.4e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000027221	-	3680	XM_015388684	ENSCVAP00000031921	400 (aa)	XP_015244170	UPI000742CB67

Gene Model

Click here to download ENSCVAG00000021558's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000021558's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000021558	ssb	100	57.073	ENSG00000138385	SSB	98	64.407	Homo_sapiens
ENSCVAG00000021558	ssb	100	83.000	ENSAPOG00000003448	ssb	100	79.250	Acanthochromis_polyacanthus
ENSCVAG00000021558	ssb	100	55.714	ENSAMEG00000010507	SSB	99	55.370	Ailuropoda_melanoleuca
ENSCVAG00000021558	ssb	94	80.749	ENSACIG00000001738	ssb	99	77.206	Amphilophus_citrinellus
ENSCVAG00000021558	ssb	100	80.250	ENSAOCG00000020398	ssb	100	79.500	Amphiprion_ocellaris
ENSCVAG00000021558	ssb	100	80.250	ENSAPEG00000020395	ssb	100	79.500	Amphiprion_percula
ENSCVAG00000021558	ssb	100	80.750	ENSATEG00000016884	ssb	100	80.250	Anabas_testudineus
ENSCVAG00000021558	ssb	100	54.739	ENSAPLG00000006109	SSB	99	54.976	Anas_platyrhynchos
ENSCVAG00000021558	ssb	100	54.854	ENSACAG00000017008	SSB	99	54.854	Anolis_carolinensis
ENSCVAG00000021558	ssb	100	52.826	ENSANAG00000027195	-	99	51.843	Aotus_nancymaae
ENSCVAG00000021558	ssb	100	76.559	ENSACLG00000010798	ssb	100	74.564	Astatotilapia_calliptera
ENSCVAG00000021558	ssb	100	60.732	ENSAMXG00000012606	ssb	100	63.350	Astyanax_mexicanus
ENSCVAG00000021558	ssb	100	58.621	ENSBTAG00000008716	SSB	99	58.128	Bos_taurus
ENSCVAG00000021558	ssb	75	35.831	WBGene00016653	C44E4.4	77	35.714	Caenorhabditis_elegans
ENSCVAG00000021558	ssb	100	57.248	ENSCJAG00000045073	SSB	99	57.002	Callithrix_jacchus
ENSCVAG00000021558	ssb	100	57.598	ENSCAFG00000012418	SSB	99	57.108	Canis_familiaris
ENSCVAG00000021558	ssb	100	57.598	ENSCAFG00020002900	SSB	99	57.108	Canis_lupus_dingo
ENSCVAG00000021558	ssb	100	57.985	ENSCHIG00000022624	-	99	57.494	Capra_hircus
ENSCVAG00000021558	ssb	100	54.300	ENSCHIG00000022196	-	99	54.187	Capra_hircus
ENSCVAG00000021558	ssb	99	57.882	ENSTSYG00000000097	SSB	99	57.389	Carlito_syrichta
ENSCVAG00000021558	ssb	100	58.968	ENSCPOG00000003338	SSB	99	58.477	Cavia_porcellus
ENSCVAG00000021558	ssb	100	57.494	ENSCCAG00000035147	SSB	99	57.248	Cebus_capucinus
ENSCVAG00000021558	ssb	99	43.424	ENSCATG00000042909	-	98	43.035	Cercocebus_atys
ENSCVAG00000021558	ssb	72	53.425	ENSCATG00000036701	SSB	83	53.082	Cercocebus_atys
ENSCVAG00000021558	ssb	100	58.477	ENSCLAG00000015617	-	99	57.985	Chinchilla_lanigera
ENSCVAG00000021558	ssb	100	57.740	ENSCSAG00000015200	SSB	88	57.248	Chlorocebus_sabaeus
ENSCVAG00000021558	ssb	97	53.316	ENSCSAG00000018390	-	97	52.941	Chlorocebus_sabaeus
ENSCVAG00000021558	ssb	100	58.722	ENSCHOG00000007763	SSB	99	58.231	Choloepus_hoffmanni
ENSCVAG00000021558	ssb	100	59.854	ENSCPBG00000006519	SSB	99	59.611	Chrysemys_picta_bellii
ENSCVAG00000021558	ssb	100	49.507	ENSCANG00000033240	-	99	49.261	Colobus_angolensis_palliatus
ENSCVAG00000021558	ssb	100	57.740	ENSCANG00000027695	SSB	99	57.494	Colobus_angolensis_palliatus
ENSCVAG00000021558	ssb	94	45.889	ENSCANG00000028838	-	91	45.736	Colobus_angolensis_palliatus
ENSCVAG00000021558	ssb	100	52.580	ENSCGRG00001024831	Ssb	99	53.317	Cricetulus_griseus_chok1gshd
ENSCVAG00000021558	ssb	100	52.580	ENSCGRG00000005387	Ssb	99	53.317	Cricetulus_griseus_crigri
ENSCVAG00000021558	ssb	99	79.198	ENSCSEG00000011599	ssb	99	78.446	Cynoglossus_semilaevis
ENSCVAG00000021558	ssb	100	63.793	ENSDARG00000029252	ssb	100	62.836	Danio_rerio
ENSCVAG00000021558	ssb	100	58.722	ENSDNOG00000013450	SSB	99	58.231	Dasypus_novemcinctus
ENSCVAG00000021558	ssb	100	52.956	ENSDORG00000005543	Ssb	99	52.956	Dipodomys_ordii
ENSCVAG00000021558	ssb	85	34.181	FBgn0011638	La	78	36.223	Drosophila_melanogaster
ENSCVAG00000021558	ssb	51	64.851	ENSETEG00000004614	-	52	64.851	Echinops_telfairi
ENSCVAG00000021558	ssb	99	44.332	ENSEBUG00000001237	ssb	96	44.757	Eptatretus_burgeri
ENSCVAG00000021558	ssb	100	58.231	ENSEASG00005022835	SSB	99	57.740	Equus_asinus_asinus
ENSCVAG00000021558	ssb	100	58.231	ENSECAG00000018495	SSB	99	57.740	Equus_caballus
ENSCVAG00000021558	ssb	76	49.351	ENSEEUG00000008077	SSB	78	49.351	Erinaceus_europaeus
ENSCVAG00000021558	ssb	100	68.812	ENSELUG00000020929	ssb	100	70.545	Esox_lucius
ENSCVAG00000021558	ssb	100	58.333	ENSFCAG00000011601	SSB	99	57.843	Felis_catus
ENSCVAG00000021558	ssb	99	57.598	ENSFALG00000000930	SSB	99	57.353	Ficedula_albicollis
ENSCVAG00000021558	ssb	100	58.477	ENSFDAG00000000598	SSB	99	57.985	Fukomys_damarensis
ENSCVAG00000021558	ssb	75	79.538	ENSFHEG00000003268	ssb	95	78.710	Fundulus_heteroclitus
ENSCVAG00000021558	ssb	99	71.820	ENSGMOG00000002664	ssb	100	71.820	Gadus_morhua
ENSCVAG00000021558	ssb	99	57.073	ENSGALG00000009677	SSB	99	55.854	Gallus_gallus
ENSCVAG00000021558	ssb	100	86.139	ENSGAFG00000002749	ssb	100	86.386	Gambusia_affinis
ENSCVAG00000021558	ssb	100	79.012	ENSGACG00000005107	ssb	100	80.000	Gasterosteus_aculeatus
ENSCVAG00000021558	ssb	100	59.367	ENSGAGG00000007807	SSB	99	59.124	Gopherus_agassizii
ENSCVAG00000021558	ssb	100	49.140	ENSGGOG00000024891	-	99	49.140	Gorilla_gorilla
ENSCVAG00000021558	ssb	54	54.505	ENSGGOG00000023471	-	89	54.054	Gorilla_gorilla
ENSCVAG00000021558	ssb	100	76.559	ENSHBUG00000006584	ssb	100	74.564	Haplochromis_burtoni
ENSCVAG00000021558	ssb	100	52.451	ENSHGLG00000004478	-	99	51.961	Heterocephalus_glaber_female
ENSCVAG00000021558	ssb	100	52.109	ENSHGLG00000005832	-	99	51.613	Heterocephalus_glaber_female
ENSCVAG00000021558	ssb	100	58.394	ENSHGLG00000017580	-	99	57.664	Heterocephalus_glaber_female
ENSCVAG00000021558	ssb	100	52.723	ENSHGLG00100008767	-	99	52.228	Heterocephalus_glaber_male
ENSCVAG00000021558	ssb	100	58.394	ENSHGLG00100003084	-	99	57.664	Heterocephalus_glaber_male
ENSCVAG00000021558	ssb	99	75.315	ENSHCOG00000019011	ssb	99	75.063	Hippocampus_comes
ENSCVAG00000021558	ssb	100	62.864	ENSIPUG00000003681	SSB	100	61.928	Ictalurus_punctatus
ENSCVAG00000021558	ssb	100	58.231	ENSSTOG00000008416	SSB	99	57.740	Ictidomys_tridecemlineatus
ENSCVAG00000021558	ssb	89	45.251	ENSJJAG00000016250	-	94	44.693	Jaculus_jaculus
ENSCVAG00000021558	ssb	100	51.429	ENSJJAG00000023158	-	99	51.074	Jaculus_jaculus
ENSCVAG00000021558	ssb	100	83.250	ENSKMAG00000017317	ssb	100	82.750	Kryptolebias_marmoratus
ENSCVAG00000021558	ssb	100	83.500	ENSLBEG00000017345	ssb	100	80.000	Labrus_bergylta
ENSCVAG00000021558	ssb	100	53.902	ENSLACG00000014056	SSB	99	54.390	Latimeria_chalumnae
ENSCVAG00000021558	ssb	100	66.422	ENSLOCG00000007933	ssb	99	66.176	Lepisosteus_oculatus
ENSCVAG00000021558	ssb	100	54.394	ENSLAFG00000000867	-	99	54.869	Loxodonta_africana
ENSCVAG00000021558	ssb	75	43.960	ENSLAFG00000026721	-	98	43.960	Loxodonta_africana
ENSCVAG00000021558	ssb	100	50.493	ENSLAFG00000028909	-	99	49.754	Loxodonta_africana
ENSCVAG00000021558	ssb	88	50.142	ENSMFAG00000041478	-	91	51.976	Macaca_fascicularis
ENSCVAG00000021558	ssb	100	57.740	ENSMFAG00000039066	SSB	99	57.494	Macaca_fascicularis
ENSCVAG00000021558	ssb	99	42.680	ENSMMUG00000039889	-	98	42.537	Macaca_mulatta
ENSCVAG00000021558	ssb	100	57.740	ENSMMUG00000023051	SSB	99	57.494	Macaca_mulatta
ENSCVAG00000021558	ssb	100	48.775	ENSMMUG00000011724	-	97	48.403	Macaca_mulatta
ENSCVAG00000021558	ssb	88	50.142	ENSMNEG00000034698	-	91	51.976	Macaca_nemestrina
ENSCVAG00000021558	ssb	100	49.148	ENSMNEG00000028321	SSB	85	68.696	Macaca_nemestrina
ENSCVAG00000021558	ssb	100	57.740	ENSMLEG00000035717	SSB	88	68.696	Mandrillus_leucophaeus
ENSCVAG00000021558	ssb	100	40.394	ENSMLEG00000042644	-	99	39.655	Mandrillus_leucophaeus
ENSCVAG00000021558	ssb	100	80.000	ENSMAMG00000004800	ssb	100	79.500	Mastacembelus_armatus
ENSCVAG00000021558	ssb	100	76.559	ENSMZEG00005005749	ssb	100	74.564	Maylandia_zebra
ENSCVAG00000021558	ssb	99	56.829	ENSMGAG00000010328	SSB	95	62.944	Meleagris_gallopavo
ENSCVAG00000021558	ssb	95	52.344	ENSMICG00000033304	-	93	54.472	Microcebus_murinus
ENSCVAG00000021558	ssb	100	57.494	ENSMICG00000028252	-	99	57.002	Microcebus_murinus
ENSCVAG00000021558	ssb	100	54.878	ENSMODG00000008227	-	99	54.390	Monodelphis_domestica
ENSCVAG00000021558	ssb	86	55.882	ENSMODG00000007027	-	99	44.608	Monodelphis_domestica
ENSCVAG00000021558	ssb	100	43.489	ENSMODG00000019271	-	99	43.243	Monodelphis_domestica
ENSCVAG00000021558	ssb	92	75.204	ENSMALG00000008045	ssb	90	77.807	Monopterus_albus
ENSCVAG00000021558	ssb	100	52.518	MGP_CAROLIEiJ_G0023629	-	98	63.694	Mus_caroli
ENSCVAG00000021558	ssb	100	52.518	ENSMUSG00000068882	Ssb	98	63.694	Mus_musculus
ENSCVAG00000021558	ssb	100	52.278	MGP_PahariEiJ_G0025081	-	98	63.057	Mus_pahari
ENSCVAG00000021558	ssb	100	52.518	MGP_SPRETEiJ_G0024551	Ssb	98	63.694	Mus_spretus
ENSCVAG00000021558	ssb	100	57.494	ENSMPUG00000000785	SSB	99	57.002	Mustela_putorius_furo
ENSCVAG00000021558	ssb	100	57.074	ENSMLUG00000016316	SSB	99	56.250	Myotis_lucifugus
ENSCVAG00000021558	ssb	100	76.060	ENSNBRG00000012661	ssb	100	74.065	Neolamprologus_brichardi
ENSCVAG00000021558	ssb	100	57.494	ENSNLEG00000004958	SSB	99	57.248	Nomascus_leucogenys
ENSCVAG00000021558	ssb	85	45.190	ENSNLEG00000028754	-	78	46.505	Nomascus_leucogenys
ENSCVAG00000021558	ssb	62	62.400	ENSMEUG00000001650	-	100	62.400	Notamacropus_eugenii
ENSCVAG00000021558	ssb	94	56.000	ENSODEG00000004202	-	99	55.733	Octodon_degus
ENSCVAG00000021558	ssb	100	76.559	ENSONIG00000008776	ssb	100	74.813	Oreochromis_niloticus
ENSCVAG00000021558	ssb	100	55.283	ENSOANG00000008543	SSB	99	55.283	Ornithorhynchus_anatinus
ENSCVAG00000021558	ssb	100	57.248	ENSOCUG00000010396	SSB	99	57.248	Oryctolagus_cuniculus
ENSCVAG00000021558	ssb	100	82.294	ENSORLG00000017208	ssb	100	82.294	Oryzias_latipes
ENSCVAG00000021558	ssb	100	78.358	ENSORLG00020022574	ssb	100	82.090	Oryzias_latipes_hni
ENSCVAG00000021558	ssb	100	82.544	ENSORLG00015016592	ssb	100	78.554	Oryzias_latipes_hsok
ENSCVAG00000021558	ssb	100	79.602	ENSOMEG00000003193	ssb	100	79.851	Oryzias_melastigma
ENSCVAG00000021558	ssb	100	55.582	ENSOGAG00000029768	SSB	99	55.107	Otolemur_garnettii
ENSCVAG00000021558	ssb	100	57.985	ENSOARG00000002906	SSB	99	57.494	Ovis_aries
ENSCVAG00000021558	ssb	87	50.142	ENSPPAG00000006189	-	89	48.433	Pan_paniscus
ENSCVAG00000021558	ssb	100	49.631	ENSPPAG00000032427	-	100	58.915	Pan_paniscus
ENSCVAG00000021558	ssb	100	57.073	ENSPPAG00000042673	SSB	99	56.829	Pan_paniscus
ENSCVAG00000021558	ssb	100	58.333	ENSPPRG00000006599	SSB	99	57.843	Panthera_pardus
ENSCVAG00000021558	ssb	100	58.333	ENSPTIG00000011021	SSB	97	57.843	Panthera_tigris_altaica
ENSCVAG00000021558	ssb	100	57.073	ENSPTRG00000012620	SSB	99	56.829	Pan_troglodytes
ENSCVAG00000021558	ssb	100	47.420	ENSPTRG00000042880	-	99	47.420	Pan_troglodytes
ENSCVAG00000021558	ssb	100	57.740	ENSPANG00000007440	SSB	99	57.494	Papio_anubis
ENSCVAG00000021558	ssb	99	41.709	ENSPANG00000034126	-	77	45.988	Papio_anubis
ENSCVAG00000021558	ssb	97	40.051	ENSPANG00000031877	-	92	38.875	Papio_anubis
ENSCVAG00000021558	ssb	100	69.231	ENSPKIG00000019325	ssb	99	69.231	Paramormyrops_kingsleyae
ENSCVAG00000021558	ssb	100	58.881	ENSPSIG00000002265	SSB	93	58.394	Pelodiscus_sinensis
ENSCVAG00000021558	ssb	81	76.087	ENSPMGG00000020075	ssb	92	71.671	Periophthalmus_magnuspinnatus
ENSCVAG00000021558	ssb	91	45.380	ENSPMAG00000002982	ssb	89	46.494	Petromyzon_marinus
ENSCVAG00000021558	ssb	94	58.421	ENSPCIG00000028591	-	99	57.494	Phascolarctos_cinereus
ENSCVAG00000021558	ssb	100	91.022	ENSPFOG00000009650	ssb	100	87.282	Poecilia_formosa
ENSCVAG00000021558	ssb	100	86.534	ENSPLAG00000020498	ssb	100	87.282	Poecilia_latipinna
ENSCVAG00000021558	ssb	100	87.531	ENSPMEG00000001051	ssb	100	87.032	Poecilia_mexicana
ENSCVAG00000021558	ssb	93	90.885	ENSPREG00000003708	ssb	97	86.863	Poecilia_reticulata
ENSCVAG00000021558	ssb	100	57.494	ENSPPYG00000012919	SSB	99	57.248	Pongo_abelii
ENSCVAG00000021558	ssb	95	56.623	ENSPCAG00000010276	SSB	99	56.364	Procavia_capensis
ENSCVAG00000021558	ssb	100	56.265	ENSPCOG00000015741	-	92	67.241	Propithecus_coquereli
ENSCVAG00000021558	ssb	100	51.843	ENSPCOG00000023189	-	99	51.351	Propithecus_coquereli
ENSCVAG00000021558	ssb	90	59.053	ENSPVAG00000006615	SSB	100	59.053	Pteropus_vampyrus
ENSCVAG00000021558	ssb	100	76.559	ENSPNYG00000006444	ssb	100	74.564	Pundamilia_nyererei
ENSCVAG00000021558	ssb	100	61.314	ENSPNAG00000011708	ssb	100	60.386	Pygocentrus_nattereri
ENSCVAG00000021558	ssb	100	52.278	ENSRNOG00000007998	Ssb	99	51.202	Rattus_norvegicus
ENSCVAG00000021558	ssb	100	52.970	ENSRNOG00000011606	AABR07061825.1	99	52.357	Rattus_norvegicus
ENSCVAG00000021558	ssb	100	49.635	ENSRBIG00000041972	SSB	88	68.696	Rhinopithecus_bieti
ENSCVAG00000021558	ssb	99	41.687	ENSRBIG00000029918	-	98	41.439	Rhinopithecus_bieti
ENSCVAG00000021558	ssb	87	54.131	ENSRBIG00000041608	-	94	51.852	Rhinopithecus_bieti
ENSCVAG00000021558	ssb	94	48.556	ENSRBIG00000041232	-	98	48.158	Rhinopithecus_bieti
ENSCVAG00000021558	ssb	98	48.744	ENSRROG00000031684	-	99	48.363	Rhinopithecus_roxellana
ENSCVAG00000021558	ssb	99	46.898	ENSRROG00000007149	-	98	46.650	Rhinopithecus_roxellana
ENSCVAG00000021558	ssb	100	57.740	ENSRROG00000040346	SSB	99	57.494	Rhinopithecus_roxellana
ENSCVAG00000021558	ssb	87	55.840	ENSRROG00000034102	-	96	51.005	Rhinopithecus_roxellana
ENSCVAG00000021558	ssb	100	57.740	ENSSBOG00000027204	SSB	99	57.494	Saimiri_boliviensis_boliviensis
ENSCVAG00000021558	ssb	100	57.248	ENSSHAG00000018062	SSB	99	57.248	Sarcophilus_harrisii
ENSCVAG00000021558	ssb	100	66.830	ENSSFOG00015000550	ssb	99	66.830	Scleropages_formosus
ENSCVAG00000021558	ssb	93	86.559	ENSSMAG00000013885	ssb	99	86.559	Scophthalmus_maximus
ENSCVAG00000021558	ssb	100	86.750	ENSSDUG00000020117	ssb	100	83.000	Seriola_dumerili
ENSCVAG00000021558	ssb	100	80.000	ENSSLDG00000002525	ssb	100	79.000	Seriola_lalandi_dorsalis
ENSCVAG00000021558	ssb	95	52.727	ENSSARG00000007747	SSB	99	52.468	Sorex_araneus
ENSCVAG00000021558	ssb	100	58.924	ENSSPUG00000012112	SSB	99	59.169	Sphenodon_punctatus
ENSCVAG00000021558	ssb	100	78.500	ENSSPAG00000005696	ssb	100	78.000	Stegastes_partitus
ENSCVAG00000021558	ssb	97	55.243	ENSSSCG00000015938	SSB	96	55.243	Sus_scrofa
ENSCVAG00000021558	ssb	95	57.841	ENSTGUG00000007942	SSB	99	57.561	Taeniopygia_guttata
ENSCVAG00000021558	ssb	100	76.500	ENSTRUG00000017839	ssb	100	76.500	Takifugu_rubripes
ENSCVAG00000021558	ssb	92	77.297	ENSTNIG00000000915	ssb	100	75.815	Tetraodon_nigroviridis
ENSCVAG00000021558	ssb	82	68.696	ENSTBEG00000009056	SSB	81	68.696	Tupaia_belangeri
ENSCVAG00000021558	ssb	100	58.333	ENSTTRG00000002152	SSB	99	57.843	Tursiops_truncatus
ENSCVAG00000021558	ssb	95	58.747	ENSUAMG00000027833	SSB	99	58.225	Ursus_americanus
ENSCVAG00000021558	ssb	100	57.843	ENSUMAG00000013907	SSB	99	57.353	Ursus_maritimus
ENSCVAG00000021558	ssb	100	57.568	ENSVPAG00000007183	SSB	99	57.072	Vicugna_pacos
ENSCVAG00000021558	ssb	100	57.598	ENSVVUG00000016573	SSB	77	57.108	Vulpes_vulpes
ENSCVAG00000021558	ssb	99	52.914	ENSXETG00000025402	ssb	99	53.147	Xenopus_tropicalis
ENSCVAG00000021558	ssb	93	85.523	ENSXCOG00000019109	ssb	93	85.714	Xiphophorus_couchianus
ENSCVAG00000021558	ssb	100	88.614	ENSXMAG00000004888	ssb	100	84.901	Xiphophorus_maculatus