EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCVAG00000021573 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: SUB1 homolog%2C transcriptional regulator
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Plus strand
Length: 3560 bases
Position: chrKL652881.1:12357-15916
Accession: 107092428
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000031930	PC4	PF02229.16	5.5e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000027244	-	1016	XM_015386915	ENSCVAP00000031930	171 (aa)	XP_015242401	-

Gene Model

Click here to download ENSCVAG00000021573's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000021573's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000021573	-	72	79.839	ENSAMXG00000038560	-	98	79.839	Astyanax_mexicanus
ENSCVAG00000021573	-	73	54.331	ENSCPBG00000010898	-	100	52.756	Chrysemys_picta_bellii
ENSCVAG00000021573	-	73	43.750	ENSCING00000017560	-	52	51.562	Ciona_intestinalis
ENSCVAG00000021573	-	73	86.400	ENSCSEG00000011154	-	100	86.400	Cynoglossus_semilaevis
ENSCVAG00000021573	-	73	87.200	ENSCSEG00000009205	-	100	87.200	Cynoglossus_semilaevis
ENSCVAG00000021573	-	53	37.778	FBgn0015299	Ssb-c31a	52	39.655	Drosophila_melanogaster
ENSCVAG00000021573	-	74	77.099	ENSELUG00000005136	TCP4	100	73.846	Esox_lucius
ENSCVAG00000021573	-	73	76.744	ENSELUG00000022688	sub1	100	72.868	Esox_lucius
ENSCVAG00000021573	-	73	83.200	ENSGMOG00000011659	-	100	83.200	Gadus_morhua
ENSCVAG00000021573	-	73	90.400	ENSGAFG00000016251	-	100	95.200	Gambusia_affinis
ENSCVAG00000021573	-	73	90.400	ENSKMAG00000013670	-	100	90.400	Kryptolebias_marmoratus
ENSCVAG00000021573	-	72	88.618	ENSMMOG00000008698	-	98	86.992	Mola_mola
ENSCVAG00000021573	-	56	73.684	ENSNGAG00000001935	-	69	73.684	Nannospalax_galili
ENSCVAG00000021573	-	73	61.905	ENSODEG00000004776	-	100	61.905	Octodon_degus
ENSCVAG00000021573	-	73	92.800	ENSONIG00000013958	-	100	92.800	Oreochromis_niloticus
ENSCVAG00000021573	-	72	88.618	ENSORLG00000017237	sub1	98	88.618	Oryzias_latipes
ENSCVAG00000021573	-	72	88.618	ENSORLG00020014865	sub1	98	88.618	Oryzias_latipes_hni
ENSCVAG00000021573	-	72	88.618	ENSORLG00015005820	sub1	98	88.618	Oryzias_latipes_hsok
ENSCVAG00000021573	-	72	88.618	ENSOMEG00000003351	-	98	88.618	Oryzias_melastigma
ENSCVAG00000021573	-	72	85.600	ENSPMGG00000017654	-	98	82.400	Periophthalmus_magnuspinnatus
ENSCVAG00000021573	-	73	90.400	ENSPFOG00000017101	-	100	95.200	Poecilia_formosa
ENSCVAG00000021573	-	73	90.400	ENSPLAG00000015088	-	100	95.200	Poecilia_latipinna
ENSCVAG00000021573	-	73	90.400	ENSPMEG00000023692	-	100	95.200	Poecilia_mexicana
ENSCVAG00000021573	-	73	90.400	ENSPREG00000011918	-	100	95.200	Poecilia_reticulata
ENSCVAG00000021573	-	73	89.600	ENSXCOG00000009356	-	100	94.400	Xiphophorus_couchianus
ENSCVAG00000021573	-	73	89.600	ENSXMAG00000013353	-	100	94.400	Xiphophorus_maculatus