EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCVAG00000022039 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: si:dkey-81b15.1|wu:fc32f10|zgc:101655
Full Name: -
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Plus strand
Length: 8104 bases
Position: chrKL652757.1:594085-602188
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000018728	CPSF73-100_C	PF11718.8	4e-52	1	1
ENSCVAP00000018728	RMMBL	PF07521.12	7.5e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000027792	-	990	-	ENSCVAP00000018728	329 (aa)	-	-

Gene Model

Click here to download ENSCVAG00000022039's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000022039's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000022039	-	94	73.585	ENSACIG00000023663	CPSF3	50	73.585	Amphilophus_citrinellus
ENSCVAG00000022039	-	94	81.646	ENSACIG00000009846	cpsf3	50	81.646	Amphilophus_citrinellus
ENSCVAG00000022039	-	94	68.966	ENSACAG00000001759	CPSF3	50	68.966	Anolis_carolinensis
ENSCVAG00000022039	-	94	73.585	ENSACLG00000018846	CPSF3	50	73.585	Astatotilapia_calliptera
ENSCVAG00000022039	-	95	71.429	ENSCSAG00000007125	CPSF3	51	71.429	Chlorocebus_sabaeus
ENSCVAG00000022039	-	96	72.121	ENSFHEG00000012186	CPSF3	89	72.121	Fundulus_heteroclitus
ENSCVAG00000022039	-	94	71.250	ENSGALG00000016424	CPSF3	50	71.250	Gallus_gallus
ENSCVAG00000022039	-	94	91.346	ENSGAFG00000019449	cpsf3	50	91.346	Gambusia_affinis
ENSCVAG00000022039	-	94	70.533	ENSGAGG00000025583	CPSF3	63	70.533	Gopherus_agassizii
ENSCVAG00000022039	-	94	72.013	ENSGGOG00000001757	CPSF3	50	72.013	Gorilla_gorilla
ENSCVAG00000022039	-	94	73.567	ENSHBUG00000014332	CPSF3	78	73.567	Haplochromis_burtoni
ENSCVAG00000022039	-	94	74.448	ENSIPUG00000023488	cpsf3	50	74.121	Ictalurus_punctatus
ENSCVAG00000022039	-	86	82.394	ENSLBEG00000015018	-	77	82.394	Labrus_bergylta
ENSCVAG00000022039	-	94	71.698	ENSMNEG00000039447	CPSF3	51	71.698	Macaca_nemestrina
ENSCVAG00000022039	-	94	75.159	ENSMAMG00000008835	CPSF3	50	75.159	Mastacembelus_armatus
ENSCVAG00000022039	-	94	73.817	ENSMZEG00005006258	CPSF3	50	73.585	Maylandia_zebra
ENSCVAG00000022039	-	94	72.013	ENSMAUG00000000166	Cpsf3	85	72.013	Mesocricetus_auratus
ENSCVAG00000022039	-	94	81.905	ENSMALG00000016416	cpsf3	50	80.064	Monopterus_albus
ENSCVAG00000022039	-	94	73.585	ENSNBRG00000010525	CPSF3	50	73.585	Neolamprologus_brichardi
ENSCVAG00000022039	-	94	71.069	ENSOANG00000008577	CPSF3	56	71.069	Ornithorhynchus_anatinus
ENSCVAG00000022039	-	94	71.698	ENSPTIG00000003920	CPSF3	50	72.013	Panthera_tigris_altaica
ENSCVAG00000022039	-	94	74.448	ENSPKIG00000023646	cpsf3	50	74.448	Paramormyrops_kingsleyae
ENSCVAG00000022039	-	94	73.802	ENSPMGG00000015311	CPSF3	78	73.802	Periophthalmus_magnuspinnatus
ENSCVAG00000022039	-	94	74.295	ENSPLAG00000021300	-	79	74.295	Poecilia_latipinna
ENSCVAG00000022039	-	94	73.817	ENSPNAG00000023060	cpsf3	50	73.817	Pygocentrus_nattereri
ENSCVAG00000022039	-	94	74.214	ENSSFOG00015002108	cpsf3	50	74.214	Scleropages_formosus
ENSCVAG00000022039	-	94	74.051	ENSSDUG00000018498	CPSF3	50	74.051	Seriola_dumerili
ENSCVAG00000022039	-	94	72.013	ENSSSCG00000020799	CPSF3	50	72.013	Sus_scrofa
ENSCVAG00000022039	-	94	77.707	ENSTRUG00000007030	cpsf3	76	76.527	Takifugu_rubripes
ENSCVAG00000022039	-	94	65.924	ENSTRUG00000013905	CPSF3	76	65.924	Takifugu_rubripes
ENSCVAG00000022039	-	94	74.608	ENSXCOG00000000957	-	75	74.608	Xiphophorus_couchianus