EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCVAG00000022068 (Gene tree)
Gene ID: 107091290
Gene Symbol: setd1ba
Alias: im:7156157|si:dkey-237o15.4
Full Name: histone-lysine N-methyltransferase SETD1B-A-like
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Plus strand
Length: 12397 bases
Position: chrKL652831.1:375540-387936
Accession: 107091290
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000018734	RRM_1	PF00076.22	3.3e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000027759	-	5349	XM_015385120	ENSCVAP00000018734	1782 (aa)	XP_015240606	-

Gene Model

Click here to download ENSCVAG00000022068's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000022068's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCVAG00000022068	setd1ba	54	64.725	ENSCVAG00000011672	setd1a	55	64.725

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000022068	setd1ba	55	79.507	ENSAPOG00000014731	setd1ba	55	79.507	Acanthochromis_polyacanthus
ENSCVAG00000022068	setd1ba	55	79.803	ENSAOCG00000012148	setd1ba	57	79.803	Amphiprion_ocellaris
ENSCVAG00000022068	setd1ba	99	74.699	ENSAPEG00000010762	setd1ba	56	77.767	Amphiprion_percula
ENSCVAG00000022068	setd1ba	93	75.838	ENSATEG00000021563	setd1ba	99	78.423	Anabas_testudineus
ENSCVAG00000022068	setd1ba	86	56.406	ENSAPLG00000005217	SETD1B	85	55.620	Anas_platyrhynchos
ENSCVAG00000022068	setd1ba	55	80.420	ENSACLG00000016584	setd1ba	55	80.420	Astatotilapia_calliptera
ENSCVAG00000022068	setd1ba	52	70.122	ENSCAFG00020016619	SETD1B	85	49.563	Canis_lupus_dingo
ENSCVAG00000022068	setd1ba	50	70.571	ENSCHIG00000013406	SETD1B	87	59.428	Capra_hircus
ENSCVAG00000022068	setd1ba	63	67.974	ENSCLAG00000011583	SETD1A	77	55.789	Chinchilla_lanigera
ENSCVAG00000022068	setd1ba	96	56.168	ENSCPBG00000026067	SETD1B	87	56.072	Chrysemys_picta_bellii
ENSCVAG00000022068	setd1ba	62	68.627	ENSCANG00000023445	SETD1B	74	68.627	Colobus_angolensis_palliatus
ENSCVAG00000022068	setd1ba	55	76.453	ENSCSEG00000001458	setd1ba	55	76.653	Cynoglossus_semilaevis
ENSCVAG00000022068	setd1ba	62	64.630	ENSECAG00000006549	SETD1B	88	49.953	Equus_caballus
ENSCVAG00000022068	setd1ba	52	83.654	ENSFALG00000009136	SETD1B	85	55.102	Ficedula_albicollis
ENSCVAG00000022068	setd1ba	99	80.436	ENSFHEG00000013126	setd1ba	100	80.763	Fundulus_heteroclitus
ENSCVAG00000022068	setd1ba	52	86.520	ENSGMOG00000009831	setd1ba	59	86.520	Gadus_morhua
ENSCVAG00000022068	setd1ba	68	55.878	ENSGALG00000004324	SETD1B	84	56.866	Gallus_gallus
ENSCVAG00000022068	setd1ba	96	85.832	ENSGAFG00000008712	setd1ba	90	85.832	Gambusia_affinis
ENSCVAG00000022068	setd1ba	68	56.358	ENSGAGG00000025013	SETD1B	87	56.567	Gopherus_agassizii
ENSCVAG00000022068	setd1ba	55	80.420	ENSHBUG00000019992	setd1ba	55	80.420	Haplochromis_burtoni
ENSCVAG00000022068	setd1ba	99	69.897	ENSLBEG00000020113	setd1ba	55	74.126	Labrus_bergylta
ENSCVAG00000022068	setd1ba	74	55.912	ENSLACG00000018379	SETD1B	90	53.565	Latimeria_chalumnae
ENSCVAG00000022068	setd1ba	70	78.683	ENSLAFG00000026518	SETD1B	73	78.193	Loxodonta_africana
ENSCVAG00000022068	setd1ba	99	73.071	ENSMAMG00000011027	setd1ba	55	78.522	Mastacembelus_armatus
ENSCVAG00000022068	setd1ba	55	80.420	ENSMZEG00005026617	setd1ba	55	80.420	Maylandia_zebra
ENSCVAG00000022068	setd1ba	64	56.541	ENSMGAG00000004421	SETD1B	84	56.801	Meleagris_gallopavo
ENSCVAG00000022068	setd1ba	99	71.051	ENSMMOG00000008190	setd1ba	55	76.848	Mola_mola
ENSCVAG00000022068	setd1ba	99	73.781	ENSMALG00000005362	setd1ba	55	77.953	Monopterus_albus
ENSCVAG00000022068	setd1ba	50	83.775	ENSMUSG00000038384	Setd1b	86	55.656	Mus_musculus
ENSCVAG00000022068	setd1ba	99	75.756	ENSNBRG00000002915	setd1ba	56	79.941	Neolamprologus_brichardi
ENSCVAG00000022068	setd1ba	78	56.090	ENSODEG00000010155	SETD1B	86	56.240	Octodon_degus
ENSCVAG00000022068	setd1ba	56	80.299	ENSONIG00000013898	setd1ba	55	80.299	Oreochromis_niloticus
ENSCVAG00000022068	setd1ba	65	69.053	ENSORLG00015004156	setd1ba	81	75.298	Oryzias_latipes_hsok
ENSCVAG00000022068	setd1ba	99	71.053	ENSOMEG00000002270	setd1ba	56	75.298	Oryzias_melastigma
ENSCVAG00000022068	setd1ba	64	55.803	ENSOGAG00000034809	SETD1B	88	52.162	Otolemur_garnettii
ENSCVAG00000022068	setd1ba	70	80.495	ENSPPRG00000021041	SETD1B	90	53.212	Panthera_pardus
ENSCVAG00000022068	setd1ba	87	57.806	ENSPKIG00000023115	setd1ba	89	58.509	Paramormyrops_kingsleyae
ENSCVAG00000022068	setd1ba	85	77.333	ENSPMGG00000011527	setd1ba	56	70.306	Periophthalmus_magnuspinnatus
ENSCVAG00000022068	setd1ba	62	78.997	ENSPCIG00000028605	SETD1B	89	56.336	Phascolarctos_cinereus
ENSCVAG00000022068	setd1ba	99	82.388	ENSPFOG00000019768	setd1ba	100	79.935	Poecilia_formosa
ENSCVAG00000022068	setd1ba	99	81.267	ENSPLAG00000023459	setd1ba	100	79.792	Poecilia_latipinna
ENSCVAG00000022068	setd1ba	99	79.662	ENSPMEG00000020446	setd1ba	100	80.044	Poecilia_mexicana
ENSCVAG00000022068	setd1ba	99	81.649	ENSPREG00000011589	setd1ba	100	81.540	Poecilia_reticulata
ENSCVAG00000022068	setd1ba	57	79.397	ENSPNYG00000009484	setd1ba	56	80.039	Pundamilia_nyererei
ENSCVAG00000022068	setd1ba	93	55.814	ENSPNAG00000016011	setd1ba	57	61.790	Pygocentrus_nattereri
ENSCVAG00000022068	setd1ba	53	69.912	ENSRNOG00000001337	Setd1b	84	50.885	Rattus_norvegicus
ENSCVAG00000022068	setd1ba	77	75.617	ENSSFOG00015015331	setd1ba	95	58.242	Scleropages_formosus
ENSCVAG00000022068	setd1ba	68	69.849	ENSSFOG00015004814	SETD1B	74	75.793	Scleropages_formosus
ENSCVAG00000022068	setd1ba	53	76.115	ENSSPUG00000011847	SETD1B	85	54.793	Sphenodon_punctatus
ENSCVAG00000022068	setd1ba	65	81.115	ENSSSCG00000009806	SETD1B	90	61.014	Sus_scrofa
ENSCVAG00000022068	setd1ba	67	55.506	ENSTGUG00000006093	-	85	56.058	Taeniopygia_guttata
ENSCVAG00000022068	setd1ba	97	68.263	ENSTRUG00000009533	setd1ba	91	75.439	Takifugu_rubripes
ENSCVAG00000022068	setd1ba	99	71.625	ENSTNIG00000009090	setd1ba	56	76.270	Tetraodon_nigroviridis
ENSCVAG00000022068	setd1ba	56	68.593	ENSXETG00000003760	setd1b	87	51.240	Xenopus_tropicalis
ENSCVAG00000022068	setd1ba	56	82.571	ENSXCOG00000004451	setd1ba	99	82.668	Xiphophorus_couchianus