EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCVAG00000022075 (Gene tree)
Gene ID: 107098070
Gene Symbol: apex1
Alias: hm:zehn1532|wu:fc13d11|zap1|zgc:66204
Full Name: apurinic/apyrimidinic endodeoxyribonuclease 1
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Minus strand
Length: 5959 bases
Position: chrKL653244.1:101112-107070
Accession: 107098070
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000032208	Exo_endo_phos	PF03372.23	3.1e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000027797	-	3749	XM_015395510	ENSCVAP00000032208	310 (aa)	XP_015250996	UPI0007429A6F

Gene Model

Click here to download ENSCVAG00000022075's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000022075's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000022075	apex1	99	65.823	ENSG00000100823	APEX1	88	70.968	Homo_sapiens
ENSCVAG00000022075	apex1	100	90.000	ENSAPOG00000017002	apex1	100	90.000	Acanthochromis_polyacanthus
ENSCVAG00000022075	apex1	99	66.456	ENSAMEG00000005418	APEX1	88	70.968	Ailuropoda_melanoleuca
ENSCVAG00000022075	apex1	89	93.141	ENSACIG00000010653	apex1	95	93.214	Amphilophus_citrinellus
ENSCVAG00000022075	apex1	100	90.645	ENSAOCG00000009649	apex1	100	90.645	Amphiprion_ocellaris
ENSCVAG00000022075	apex1	100	90.968	ENSAPEG00000021453	apex1	100	90.968	Amphiprion_percula
ENSCVAG00000022075	apex1	99	92.557	ENSATEG00000002883	apex1	97	92.557	Anabas_testudineus
ENSCVAG00000022075	apex1	90	73.214	ENSACAG00000008099	APEX1	88	73.214	Anolis_carolinensis
ENSCVAG00000022075	apex1	99	66.772	ENSANAG00000030117	APEX1	99	66.772	Aotus_nancymaae
ENSCVAG00000022075	apex1	100	91.935	ENSACLG00000018441	apex1	100	91.935	Astatotilapia_calliptera
ENSCVAG00000022075	apex1	99	86.129	ENSAMXG00000034699	apex1	99	86.129	Astyanax_mexicanus
ENSCVAG00000022075	apex1	99	65.823	ENSBTAG00000002745	APEX1	99	65.823	Bos_taurus
ENSCVAG00000022075	apex1	93	43.253	WBGene00001372	exo-3	92	45.318	Caenorhabditis_elegans
ENSCVAG00000022075	apex1	99	66.772	ENSCJAG00000009726	APEX1	99	66.772	Callithrix_jacchus
ENSCVAG00000022075	apex1	99	66.456	ENSCAFG00000032033	APEX1	88	71.685	Canis_familiaris
ENSCVAG00000022075	apex1	53	58.824	ENSCAFG00020023002	-	74	67.669	Canis_lupus_dingo
ENSCVAG00000022075	apex1	99	66.456	ENSCAFG00020014377	-	88	71.685	Canis_lupus_dingo
ENSCVAG00000022075	apex1	87	56.827	ENSCHIG00000014537	-	89	55.036	Capra_hircus
ENSCVAG00000022075	apex1	99	65.823	ENSCHIG00000007298	-	99	65.823	Capra_hircus
ENSCVAG00000022075	apex1	99	65.190	ENSTSYG00000034813	APEX1	88	69.892	Carlito_syrichta
ENSCVAG00000022075	apex1	87	65.091	ENSCAPG00000016235	APEX1	91	71.610	Cavia_aperea
ENSCVAG00000022075	apex1	99	67.089	ENSCPOG00000030909	APEX1	88	71.685	Cavia_porcellus
ENSCVAG00000022075	apex1	99	66.772	ENSCCAG00000033056	-	99	66.772	Cebus_capucinus
ENSCVAG00000022075	apex1	99	57.911	ENSCCAG00000031931	-	87	62.007	Cebus_capucinus
ENSCVAG00000022075	apex1	99	65.506	ENSCATG00000015580	APEX1	88	70.609	Cercocebus_atys
ENSCVAG00000022075	apex1	99	66.139	ENSCLAG00000001002	APEX1	88	70.968	Chinchilla_lanigera
ENSCVAG00000022075	apex1	99	65.823	ENSCSAG00000016670	-	88	70.968	Chlorocebus_sabaeus
ENSCVAG00000022075	apex1	99	65.823	ENSCSAG00000016685	-	88	70.968	Chlorocebus_sabaeus
ENSCVAG00000022075	apex1	99	69.937	ENSCPBG00000009567	APEX1	99	69.937	Chrysemys_picta_bellii
ENSCVAG00000022075	apex1	98	55.921	ENSCING00000008137	-	85	60.300	Ciona_intestinalis
ENSCVAG00000022075	apex1	86	53.358	ENSCSAVG00000007144	-	100	54.651	Ciona_savignyi
ENSCVAG00000022075	apex1	99	66.139	ENSCANG00000030726	APEX1	99	66.139	Colobus_angolensis_palliatus
ENSCVAG00000022075	apex1	99	64.762	ENSCGRG00001017046	Apex1	99	64.762	Cricetulus_griseus_chok1gshd
ENSCVAG00000022075	apex1	99	64.762	ENSCGRG00000008984	Apex1	99	64.762	Cricetulus_griseus_crigri
ENSCVAG00000022075	apex1	100	88.387	ENSCSEG00000017499	apex1	99	88.387	Cynoglossus_semilaevis
ENSCVAG00000022075	apex1	99	85.761	ENSDARG00000045843	apex1	99	85.761	Danio_rerio
ENSCVAG00000022075	apex1	99	63.291	ENSDNOG00000042234	APEX1	94	63.291	Dasypus_novemcinctus
ENSCVAG00000022075	apex1	99	66.139	ENSDORG00000001616	Apex1	88	70.609	Dipodomys_ordii
ENSCVAG00000022075	apex1	99	67.089	ENSETEG00000004855	-	99	67.089	Echinops_telfairi
ENSCVAG00000022075	apex1	76	60.924	ENSEBUG00000000622	-	92	60.924	Eptatretus_burgeri
ENSCVAG00000022075	apex1	99	66.772	ENSEASG00005017489	APEX1	65	71.685	Equus_asinus_asinus
ENSCVAG00000022075	apex1	99	66.772	ENSECAG00000022325	APEX1	72	71.685	Equus_caballus
ENSCVAG00000022075	apex1	86	71.004	ENSEEUG00000012569	APEX1	93	71.004	Erinaceus_europaeus
ENSCVAG00000022075	apex1	99	82.258	ENSELUG00000021706	apex1	99	84.194	Esox_lucius
ENSCVAG00000022075	apex1	99	67.089	ENSFCAG00000030869	APEX1	88	72.043	Felis_catus
ENSCVAG00000022075	apex1	99	67.089	ENSFDAG00000006120	APEX1	88	72.043	Fukomys_damarensis
ENSCVAG00000022075	apex1	100	95.484	ENSFHEG00000009031	apex1	83	95.484	Fundulus_heteroclitus
ENSCVAG00000022075	apex1	100	76.452	ENSGMOG00000007943	apex1	99	76.452	Gadus_morhua
ENSCVAG00000022075	apex1	100	93.548	ENSGAFG00000005311	apex1	100	93.548	Gambusia_affinis
ENSCVAG00000022075	apex1	100	90.000	ENSGACG00000019497	apex1	99	92.075	Gasterosteus_aculeatus
ENSCVAG00000022075	apex1	99	69.620	ENSGAGG00000014999	APEX1	99	69.620	Gopherus_agassizii
ENSCVAG00000022075	apex1	99	65.506	ENSGGOG00000002128	APEX1	88	70.609	Gorilla_gorilla
ENSCVAG00000022075	apex1	100	91.613	ENSHBUG00000005894	apex1	100	91.613	Haplochromis_burtoni
ENSCVAG00000022075	apex1	99	66.772	ENSHGLG00000002848	APEX1	88	71.685	Heterocephalus_glaber_female
ENSCVAG00000022075	apex1	99	66.772	ENSHGLG00100017878	APEX1	88	71.685	Heterocephalus_glaber_male
ENSCVAG00000022075	apex1	100	89.389	ENSHCOG00000009961	apex1	100	89.389	Hippocampus_comes
ENSCVAG00000022075	apex1	99	83.871	ENSIPUG00000005799	apex1	99	82.848	Ictalurus_punctatus
ENSCVAG00000022075	apex1	99	66.456	ENSSTOG00000010096	APEX1	99	66.456	Ictidomys_tridecemlineatus
ENSCVAG00000022075	apex1	90	62.007	ENSJJAG00000020465	-	90	62.007	Jaculus_jaculus
ENSCVAG00000022075	apex1	99	65.823	ENSJJAG00000012067	-	88	70.251	Jaculus_jaculus
ENSCVAG00000022075	apex1	99	58.861	ENSJJAG00000003660	-	99	58.228	Jaculus_jaculus
ENSCVAG00000022075	apex1	100	91.935	ENSKMAG00000021171	apex1	100	91.935	Kryptolebias_marmoratus
ENSCVAG00000022075	apex1	100	89.032	ENSLBEG00000010248	apex1	100	89.032	Labrus_bergylta
ENSCVAG00000022075	apex1	99	73.567	ENSLACG00000008617	APEX1	89	77.857	Latimeria_chalumnae
ENSCVAG00000022075	apex1	99	77.636	ENSLOCG00000015516	apex1	99	77.316	Lepisosteus_oculatus
ENSCVAG00000022075	apex1	99	67.405	ENSLAFG00000021872	APEX1	88	72.401	Loxodonta_africana
ENSCVAG00000022075	apex1	99	65.506	ENSMFAG00000002565	APEX1	88	70.609	Macaca_fascicularis
ENSCVAG00000022075	apex1	99	65.506	ENSMMUG00000048039	APEX1	88	70.609	Macaca_mulatta
ENSCVAG00000022075	apex1	99	65.615	ENSMNEG00000036944	APEX1	88	70.609	Macaca_nemestrina
ENSCVAG00000022075	apex1	99	65.506	ENSMLEG00000042125	APEX1	88	70.609	Mandrillus_leucophaeus
ENSCVAG00000022075	apex1	100	91.290	ENSMAMG00000023526	apex1	100	91.290	Mastacembelus_armatus
ENSCVAG00000022075	apex1	100	91.935	ENSMZEG00005014187	apex1	100	91.935	Maylandia_zebra
ENSCVAG00000022075	apex1	99	65.506	ENSMAUG00000013994	Apex1	88	69.176	Mesocricetus_auratus
ENSCVAG00000022075	apex1	99	65.506	ENSMICG00000043554	APEX1	88	70.609	Microcebus_murinus
ENSCVAG00000022075	apex1	99	66.984	ENSMOCG00000013721	Apex1	99	66.984	Microtus_ochrogaster
ENSCVAG00000022075	apex1	100	88.103	ENSMMOG00000010031	apex1	97	88.103	Mola_mola
ENSCVAG00000022075	apex1	90	70.251	ENSMODG00000007125	APEX1	87	70.251	Monodelphis_domestica
ENSCVAG00000022075	apex1	90	85.000	ENSMALG00000011699	apex1	75	85.000	Monopterus_albus
ENSCVAG00000022075	apex1	99	67.197	MGP_CAROLIEiJ_G0019209	Apex1	99	67.197	Mus_caroli
ENSCVAG00000022075	apex1	99	66.984	ENSMUSG00000035960	Apex1	99	66.984	Mus_musculus
ENSCVAG00000022075	apex1	99	67.302	MGP_PahariEiJ_G0030232	Apex1	99	67.302	Mus_pahari
ENSCVAG00000022075	apex1	99	66.984	MGP_SPRETEiJ_G0020101	Apex1	99	66.984	Mus_spretus
ENSCVAG00000022075	apex1	96	67.559	ENSMLUG00000028957	APEX1	87	70.609	Myotis_lucifugus
ENSCVAG00000022075	apex1	87	53.430	ENSNGAG00000021748	-	72	57.500	Nannospalax_galili
ENSCVAG00000022075	apex1	99	67.508	ENSNGAG00000002725	-	99	66.139	Nannospalax_galili
ENSCVAG00000022075	apex1	100	91.935	ENSNBRG00000005334	apex1	91	91.935	Neolamprologus_brichardi
ENSCVAG00000022075	apex1	99	65.506	ENSNLEG00000010839	APEX1	89	70.609	Nomascus_leucogenys
ENSCVAG00000022075	apex1	99	65.924	ENSMEUG00000014519	APEX1	89	69.534	Notamacropus_eugenii
ENSCVAG00000022075	apex1	99	65.506	ENSOPRG00000014029	APEX1	88	69.892	Ochotona_princeps
ENSCVAG00000022075	apex1	95	52.721	ENSODEG00000004777	-	83	58.333	Octodon_degus
ENSCVAG00000022075	apex1	99	66.772	ENSODEG00000001703	-	88	71.685	Octodon_degus
ENSCVAG00000022075	apex1	99	52.548	ENSODEG00000006583	-	87	55.439	Octodon_degus
ENSCVAG00000022075	apex1	100	91.935	ENSONIG00000012089	apex1	100	91.935	Oreochromis_niloticus
ENSCVAG00000022075	apex1	88	69.455	ENSOANG00000008836	APEX1	68	69.455	Ornithorhynchus_anatinus
ENSCVAG00000022075	apex1	99	66.456	ENSOCUG00000005022	APEX1	99	66.456	Oryctolagus_cuniculus
ENSCVAG00000022075	apex1	100	91.961	ENSORLG00000012378	apex1	100	91.961	Oryzias_latipes
ENSCVAG00000022075	apex1	100	91.961	ENSORLG00020021371	apex1	100	91.961	Oryzias_latipes_hni
ENSCVAG00000022075	apex1	100	91.961	ENSORLG00015020089	apex1	100	91.961	Oryzias_latipes_hsok
ENSCVAG00000022075	apex1	100	90.997	ENSOMEG00000018876	apex1	100	90.997	Oryzias_melastigma
ENSCVAG00000022075	apex1	99	59.416	ENSOGAG00000029355	-	89	63.441	Otolemur_garnettii
ENSCVAG00000022075	apex1	99	66.456	ENSOGAG00000013335	-	88	71.685	Otolemur_garnettii
ENSCVAG00000022075	apex1	99	56.026	ENSOARG00000014424	-	89	58.423	Ovis_aries
ENSCVAG00000022075	apex1	96	63.072	ENSOARG00000001876	-	87	67.286	Ovis_aries
ENSCVAG00000022075	apex1	99	65.823	ENSOARG00000019740	-	99	65.823	Ovis_aries
ENSCVAG00000022075	apex1	99	65.823	ENSPPAG00000038760	APEX1	89	70.968	Pan_paniscus
ENSCVAG00000022075	apex1	99	67.089	ENSPPRG00000011794	APEX1	99	67.089	Panthera_pardus
ENSCVAG00000022075	apex1	99	67.089	ENSPTIG00000014829	APEX1	88	72.043	Panthera_tigris_altaica
ENSCVAG00000022075	apex1	99	65.823	ENSPTRG00000006093	APEX1	89	70.968	Pan_troglodytes
ENSCVAG00000022075	apex1	99	65.506	ENSPANG00000022757	APEX1	88	70.609	Papio_anubis
ENSCVAG00000022075	apex1	89	87.681	ENSPKIG00000003504	apex1	99	84.615	Paramormyrops_kingsleyae
ENSCVAG00000022075	apex1	88	75.824	ENSPMGG00000016596	apex1	80	75.824	Periophthalmus_magnuspinnatus
ENSCVAG00000022075	apex1	99	66.032	ENSPEMG00000019097	Apex1	99	66.032	Peromyscus_maniculatus_bairdii
ENSCVAG00000022075	apex1	93	72.509	ENSPMAG00000007275	-	95	74.194	Petromyzon_marinus
ENSCVAG00000022075	apex1	90	69.534	ENSPCIG00000023274	APEX1	87	69.534	Phascolarctos_cinereus
ENSCVAG00000022075	apex1	100	93.226	ENSPFOG00000004178	apex1	100	93.226	Poecilia_formosa
ENSCVAG00000022075	apex1	100	93.548	ENSPLAG00000012779	apex1	100	93.548	Poecilia_latipinna
ENSCVAG00000022075	apex1	100	93.226	ENSPMEG00000019623	apex1	100	93.226	Poecilia_mexicana
ENSCVAG00000022075	apex1	100	91.935	ENSPREG00000014298	apex1	99	91.935	Poecilia_reticulata
ENSCVAG00000022075	apex1	99	65.506	ENSPPYG00000005565	APEX1	88	70.609	Pongo_abelii
ENSCVAG00000022075	apex1	99	64.873	ENSPCAG00000010376	APEX1	99	64.873	Procavia_capensis
ENSCVAG00000022075	apex1	99	65.823	ENSPCOG00000021564	APEX1	88	70.968	Propithecus_coquereli
ENSCVAG00000022075	apex1	96	67.893	ENSPVAG00000010736	APEX1	87	71.326	Pteropus_vampyrus
ENSCVAG00000022075	apex1	100	92.258	ENSPNYG00000023940	apex1	100	92.258	Pundamilia_nyererei
ENSCVAG00000022075	apex1	92	84.615	ENSPNAG00000020897	apex1	96	84.561	Pygocentrus_nattereri
ENSCVAG00000022075	apex1	99	66.667	ENSRNOG00000009663	Apex1	99	66.667	Rattus_norvegicus
ENSCVAG00000022075	apex1	99	65.823	ENSRBIG00000038325	APEX1	87	70.968	Rhinopithecus_bieti
ENSCVAG00000022075	apex1	99	66.772	ENSSBOG00000018921	-	99	66.772	Saimiri_boliviensis_boliviensis
ENSCVAG00000022075	apex1	97	59.677	ENSSBOG00000031372	-	91	62.724	Saimiri_boliviensis_boliviensis
ENSCVAG00000022075	apex1	100	64.013	ENSSHAG00000013524	APEX1	97	64.013	Sarcophilus_harrisii
ENSCVAG00000022075	apex1	99	81.553	ENSSFOG00015001948	apex1	99	81.553	Scleropages_formosus
ENSCVAG00000022075	apex1	100	85.714	ENSSMAG00000013348	apex1	100	86.349	Scophthalmus_maximus
ENSCVAG00000022075	apex1	100	89.677	ENSSDUG00000016377	apex1	99	89.677	Seriola_dumerili
ENSCVAG00000022075	apex1	100	89.355	ENSSLDG00000023005	apex1	100	89.355	Seriola_lalandi_dorsalis
ENSCVAG00000022075	apex1	90	73.571	ENSSPUG00000000531	APEX1	94	73.477	Sphenodon_punctatus
ENSCVAG00000022075	apex1	100	91.613	ENSSPAG00000000458	apex1	100	91.613	Stegastes_partitus
ENSCVAG00000022075	apex1	99	66.139	ENSSSCG00000040060	-	87	71.739	Sus_scrofa
ENSCVAG00000022075	apex1	95	39.934	ENSSSCG00000039705	-	89	41.516	Sus_scrofa
ENSCVAG00000022075	apex1	76	59.149	ENSTGUG00000014378	APEX1	100	59.149	Taeniopygia_guttata
ENSCVAG00000022075	apex1	100	84.345	ENSTRUG00000004268	apex1	95	85.623	Takifugu_rubripes
ENSCVAG00000022075	apex1	100	86.129	ENSTNIG00000005778	apex1	100	86.129	Tetraodon_nigroviridis
ENSCVAG00000022075	apex1	99	63.608	ENSTBEG00000006405	APEX1	99	63.608	Tupaia_belangeri
ENSCVAG00000022075	apex1	76	70.638	ENSTTRG00000007860	APEX1	100	70.638	Tursiops_truncatus
ENSCVAG00000022075	apex1	99	66.772	ENSUAMG00000010457	APEX1	88	70.968	Ursus_americanus
ENSCVAG00000022075	apex1	99	66.772	ENSUMAG00000009178	APEX1	88	70.968	Ursus_maritimus
ENSCVAG00000022075	apex1	76	65.957	ENSVPAG00000005083	APEX1	100	65.957	Vicugna_pacos
ENSCVAG00000022075	apex1	99	66.139	ENSVVUG00000009010	APEX1	99	66.139	Vulpes_vulpes
ENSCVAG00000022075	apex1	99	69.108	ENSXETG00000024773	apex1	99	68.471	Xenopus_tropicalis
ENSCVAG00000022075	apex1	100	93.226	ENSXCOG00000015233	apex1	99	93.226	Xiphophorus_couchianus
ENSCVAG00000022075	apex1	100	93.226	ENSXMAG00000006195	apex1	100	93.226	Xiphophorus_maculatus