EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCVAG00000022101 (Gene tree)
Gene ID: 107089011
Gene Symbol: -
Alias: si:dkey-109n11.2
Full Name: uncharacterized LOC107089011
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Plus strand
Length: 4104 bases
Position: chrKL652735.1:321213-325316
Accession: 107089011
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000032233	zf-C2H2	PF00096.26	2e-33	1	6
ENSCVAP00000032233	zf-C2H2	PF00096.26	2e-33	2	6
ENSCVAP00000032233	zf-C2H2	PF00096.26	2e-33	3	6
ENSCVAP00000032233	zf-C2H2	PF00096.26	2e-33	4	6
ENSCVAP00000032233	zf-C2H2	PF00096.26	2e-33	5	6
ENSCVAP00000032233	zf-C2H2	PF00096.26	2e-33	6	6
ENSCVAP00000032233	zf-met	PF12874.7	3e-07	1	2
ENSCVAP00000032233	zf-met	PF12874.7	3e-07	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000027834	-	4104	XM_015381514	ENSCVAP00000032233	1367 (aa)	XP_015237000	UPI0007427E8A

Gene Model

Click here to download ENSCVAG00000022101's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000022101's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000022101	-	63	85.219	ENSAPOG00000014819	-	99	85.144	Acanthochromis_polyacanthus
ENSCVAG00000022101	-	60	79.646	ENSAOCG00000022926	-	97	83.628	Amphiprion_ocellaris
ENSCVAG00000022101	-	98	77.554	ENSCSEG00000016863	-	99	76.493	Cynoglossus_semilaevis
ENSCVAG00000022101	-	100	89.057	ENSFHEG00000001706	-	100	88.121	Fundulus_heteroclitus
ENSCVAG00000022101	-	99	70.601	ENSHCOG00000018630	-	99	70.203	Hippocampus_comes
ENSCVAG00000022101	-	65	86.719	ENSKMAG00000018789	-	100	83.980	Kryptolebias_marmoratus
ENSCVAG00000022101	-	62	82.305	ENSMMOG00000013085	-	99	82.201	Mola_mola
ENSCVAG00000022101	-	100	81.143	ENSONIG00000007045	-	100	92.308	Oreochromis_niloticus
ENSCVAG00000022101	-	100	78.967	ENSORLG00015019057	-	100	78.821	Oryzias_latipes_hsok
ENSCVAG00000022101	-	87	57.692	ENSPKIG00000012449	si:dkeyp-69b9.6	72	63.850	Paramormyrops_kingsleyae
ENSCVAG00000022101	-	97	88.337	ENSPFOG00000007425	-	99	87.208	Poecilia_formosa
ENSCVAG00000022101	-	100	88.817	ENSPLAG00000013476	-	100	87.885	Poecilia_latipinna
ENSCVAG00000022101	-	100	86.526	ENSPMEG00000010070	-	100	86.089	Poecilia_mexicana
ENSCVAG00000022101	-	65	80.243	ENSSMAG00000016019	-	100	81.543	Scophthalmus_maximus
ENSCVAG00000022101	-	62	81.148	ENSSPAG00000001452	-	99	84.836	Stegastes_partitus