EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCVAG00000022122 (Gene tree)
Gene ID: 107089013
Gene Symbol: cnot3b
Alias: cnot3|wu:fi20g07|zgc:55934
Full Name: CCR4-NOT transcription complex subunit 3-like
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Plus strand
Length: 39451 bases
Position: chrKL652735.1:183641-223091
Accession: 107089013
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000018819	Not3	PF04065.15	2.3e-95	1	1
ENSCVAP00000032246	Not3	PF04065.15	2.3e-95	1	1
ENSCVAP00000018819	NOT2_3_5	PF04153.18	7.3e-40	1	1
ENSCVAP00000032246	NOT2_3_5	PF04153.18	7.3e-40	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000032877	-	5715	XM_015381519	ENSCVAP00000018819	905 (aa)	XP_015237005	UPI0007427E50
ENSCVAT00000032872	-	5726	-	ENSCVAP00000032246	905 (aa)	-	UPI0007427E50

Gene Model

Click here to download ENSCVAG00000022122's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000022122's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000022122	cnot3b	70	77.358	ENSG00000088038	CNOT3	100	94.845	Homo_sapiens
ENSCVAG00000022122	cnot3b	66	89.474	ENSAPOG00000015002	cnot3b	93	89.474	Acanthochromis_polyacanthus
ENSCVAG00000022122	cnot3b	57	79.570	ENSAPOG00000015499	CNOT3	92	79.570	Acanthochromis_polyacanthus
ENSCVAG00000022122	cnot3b	62	90.132	ENSAMEG00000004528	CNOT3	74	89.836	Ailuropoda_melanoleuca
ENSCVAG00000022122	cnot3b	67	94.196	ENSACIG00000003652	cnot3b	99	95.455	Amphilophus_citrinellus
ENSCVAG00000022122	cnot3b	55	91.026	ENSACIG00000006635	cnot3a	82	93.243	Amphilophus_citrinellus
ENSCVAG00000022122	cnot3b	97	73.244	ENSAOCG00000018385	-	98	78.680	Amphiprion_ocellaris
ENSCVAG00000022122	cnot3b	97	75.947	ENSAPEG00000002640	cnot3b	100	74.029	Amphiprion_percula
ENSCVAG00000022122	cnot3b	100	80.618	ENSATEG00000015777	cnot3b	100	80.085	Anabas_testudineus
ENSCVAG00000022122	cnot3b	100	63.773	ENSATEG00000022737	cnot3a	100	64.157	Anabas_testudineus
ENSCVAG00000022122	cnot3b	78	75.000	ENSACAG00000016085	CNOT3	77	90.132	Anolis_carolinensis
ENSCVAG00000022122	cnot3b	62	90.461	ENSANAG00000025756	CNOT3	76	90.164	Aotus_nancymaae
ENSCVAG00000022122	cnot3b	100	80.579	ENSACLG00000016702	cnot3b	100	78.112	Astatotilapia_calliptera
ENSCVAG00000022122	cnot3b	100	67.444	ENSAMXG00000009447	cnot3b	95	90.323	Astyanax_mexicanus
ENSCVAG00000022122	cnot3b	100	66.881	ENSAMXG00000012359	cnot3a	100	67.384	Astyanax_mexicanus
ENSCVAG00000022122	cnot3b	62	90.461	ENSBTAG00000014900	CNOT3	74	90.164	Bos_taurus
ENSCVAG00000022122	cnot3b	70	76.692	ENSCJAG00000001094	CNOT3	73	90.164	Callithrix_jacchus
ENSCVAG00000022122	cnot3b	70	77.736	ENSCAFG00000002699	CNOT3	73	90.164	Canis_familiaris
ENSCVAG00000022122	cnot3b	70	77.736	ENSCAFG00020018359	CNOT3	73	90.164	Canis_lupus_dingo
ENSCVAG00000022122	cnot3b	62	88.449	ENSCHIG00000015302	CNOT3	75	88.158	Capra_hircus
ENSCVAG00000022122	cnot3b	62	90.461	ENSTSYG00000008058	CNOT3	74	90.164	Carlito_syrichta
ENSCVAG00000022122	cnot3b	68	77.358	ENSCAPG00000009533	CNOT3	73	90.164	Cavia_aperea
ENSCVAG00000022122	cnot3b	70	75.849	ENSCPOG00000020741	CNOT3	73	90.164	Cavia_porcellus
ENSCVAG00000022122	cnot3b	62	90.461	ENSCCAG00000036290	CNOT3	76	90.164	Cebus_capucinus
ENSCVAG00000022122	cnot3b	70	77.358	ENSCATG00000030324	CNOT3	73	90.164	Cercocebus_atys
ENSCVAG00000022122	cnot3b	69	78.437	ENSCLAG00000003302	CNOT3	100	85.366	Chinchilla_lanigera
ENSCVAG00000022122	cnot3b	70	77.358	ENSCSAG00000001900	CNOT3	73	90.164	Chlorocebus_sabaeus
ENSCVAG00000022122	cnot3b	89	64.583	ENSCPBG00000011655	CNOT3	77	90.820	Chrysemys_picta_bellii
ENSCVAG00000022122	cnot3b	84	54.167	ENSCING00000000293	-	70	69.820	Ciona_intestinalis
ENSCVAG00000022122	cnot3b	70	77.358	ENSCANG00000013408	CNOT3	73	90.164	Colobus_angolensis_palliatus
ENSCVAG00000022122	cnot3b	69	77.273	ENSCGRG00001000855	Cnot3	73	90.492	Cricetulus_griseus_chok1gshd
ENSCVAG00000022122	cnot3b	90	82.870	ENSCSEG00000016892	cnot3b	100	65.269	Cynoglossus_semilaevis
ENSCVAG00000022122	cnot3b	100	67.896	ENSDARG00000019842	cnot3b	100	68.108	Danio_rerio
ENSCVAG00000022122	cnot3b	100	64.407	ENSDARG00000007135	cnot3a	100	65.554	Danio_rerio
ENSCVAG00000022122	cnot3b	62	90.132	ENSDNOG00000045972	CNOT3	73	89.836	Dasypus_novemcinctus
ENSCVAG00000022122	cnot3b	62	90.461	ENSDORG00000008021	Cnot3	100	80.460	Dipodomys_ordii
ENSCVAG00000022122	cnot3b	52	100.000	ENSETEG00000006305	CNOT3	61	100.000	Echinops_telfairi
ENSCVAG00000022122	cnot3b	57	72.857	ENSEBUG00000010437	cnot3a	71	67.532	Eptatretus_burgeri
ENSCVAG00000022122	cnot3b	62	90.461	ENSEASG00005021591	CNOT3	73	90.164	Equus_asinus_asinus
ENSCVAG00000022122	cnot3b	62	90.461	ENSECAG00000023181	CNOT3	73	90.164	Equus_caballus
ENSCVAG00000022122	cnot3b	100	70.402	ENSELUG00000000953	cnot3b	100	70.127	Esox_lucius
ENSCVAG00000022122	cnot3b	100	62.644	ENSELUG00000014743	cnot3a	100	62.187	Esox_lucius
ENSCVAG00000022122	cnot3b	70	77.736	ENSFCAG00000014042	CNOT3	74	90.164	Felis_catus
ENSCVAG00000022122	cnot3b	100	88.683	ENSFHEG00000001696	cnot3b	100	89.119	Fundulus_heteroclitus
ENSCVAG00000022122	cnot3b	100	62.851	ENSFHEG00000023166	cnot3a	76	93.694	Fundulus_heteroclitus
ENSCVAG00000022122	cnot3b	94	61.627	ENSGMOG00000005365	cnot3a	98	62.057	Gadus_morhua
ENSCVAG00000022122	cnot3b	100	90.529	ENSGAFG00000003459	cnot3b	100	90.088	Gambusia_affinis
ENSCVAG00000022122	cnot3b	83	65.789	ENSGAGG00000012677	CNOT3	75	88.339	Gopherus_agassizii
ENSCVAG00000022122	cnot3b	70	77.358	ENSGGOG00000012996	CNOT3	76	90.164	Gorilla_gorilla
ENSCVAG00000022122	cnot3b	99	71.939	ENSHBUG00000019699	cnot3b	99	71.614	Haplochromis_burtoni
ENSCVAG00000022122	cnot3b	62	90.461	ENSHGLG00000008821	CNOT3	100	80.460	Heterocephalus_glaber_female
ENSCVAG00000022122	cnot3b	55	82.375	ENSHGLG00100006181	CNOT3	100	80.460	Heterocephalus_glaber_male
ENSCVAG00000022122	cnot3b	87	75.000	ENSIPUG00000000167	cnot3	100	61.790	Ictalurus_punctatus
ENSCVAG00000022122	cnot3b	100	65.795	ENSIPUG00000009046	cnot3b	100	64.995	Ictalurus_punctatus
ENSCVAG00000022122	cnot3b	62	90.461	ENSSTOG00000028248	CNOT3	73	90.164	Ictidomys_tridecemlineatus
ENSCVAG00000022122	cnot3b	69	79.842	ENSJJAG00000014594	Cnot3	100	80.460	Jaculus_jaculus
ENSCVAG00000022122	cnot3b	100	62.173	ENSKMAG00000004863	cnot3a	100	79.208	Kryptolebias_marmoratus
ENSCVAG00000022122	cnot3b	100	82.500	ENSKMAG00000018723	cnot3b	100	82.193	Kryptolebias_marmoratus
ENSCVAG00000022122	cnot3b	96	77.542	ENSLBEG00000018278	cnot3b	99	77.380	Labrus_bergylta
ENSCVAG00000022122	cnot3b	55	87.402	ENSLBEG00000017296	cnot3a	67	87.402	Labrus_bergylta
ENSCVAG00000022122	cnot3b	68	90.461	ENSLACG00000009742	CNOT3	76	90.164	Latimeria_chalumnae
ENSCVAG00000022122	cnot3b	54	93.464	ENSLOCG00000000005	cnot3b	79	93.464	Lepisosteus_oculatus
ENSCVAG00000022122	cnot3b	62	89.508	ENSLAFG00000022133	CNOT3	73	89.216	Loxodonta_africana
ENSCVAG00000022122	cnot3b	70	77.358	ENSMFAG00000040073	CNOT3	73	90.164	Macaca_fascicularis
ENSCVAG00000022122	cnot3b	55	90.336	ENSMMUG00000009698	CNOT3	100	99.020	Macaca_mulatta
ENSCVAG00000022122	cnot3b	70	76.226	ENSMNEG00000036750	CNOT3	73	90.164	Macaca_nemestrina
ENSCVAG00000022122	cnot3b	70	74.619	ENSMLEG00000036579	CNOT3	73	90.164	Mandrillus_leucophaeus
ENSCVAG00000022122	cnot3b	100	80.086	ENSMAMG00000019357	cnot3b	100	79.764	Mastacembelus_armatus
ENSCVAG00000022122	cnot3b	100	63.470	ENSMAMG00000019397	cnot3a	99	63.704	Mastacembelus_armatus
ENSCVAG00000022122	cnot3b	100	81.163	ENSMZEG00005002466	cnot3b	100	78.902	Maylandia_zebra
ENSCVAG00000022122	cnot3b	70	77.358	ENSMAUG00000014996	Cnot3	73	90.492	Mesocricetus_auratus
ENSCVAG00000022122	cnot3b	70	77.358	ENSMICG00000002370	CNOT3	73	90.164	Microcebus_murinus
ENSCVAG00000022122	cnot3b	61	100.000	ENSMOCG00000013249	Cnot3	63	100.000	Microtus_ochrogaster
ENSCVAG00000022122	cnot3b	100	62.327	ENSMMOG00000016446	cnot3a	100	55.866	Mola_mola
ENSCVAG00000022122	cnot3b	70	91.026	ENSMMOG00000013086	cnot3b	98	93.243	Mola_mola
ENSCVAG00000022122	cnot3b	67	79.167	ENSMODG00000004066	CNOT3	74	89.508	Monodelphis_domestica
ENSCVAG00000022122	cnot3b	100	63.039	ENSMALG00000009204	cnot3a	100	64.013	Monopterus_albus
ENSCVAG00000022122	cnot3b	85	88.158	ENSMALG00000004936	cnot3b	95	89.899	Monopterus_albus
ENSCVAG00000022122	cnot3b	70	75.665	MGP_CAROLIEiJ_G0029095	Cnot3	100	98.000	Mus_caroli
ENSCVAG00000022122	cnot3b	70	75.665	ENSMUSG00000035632	Cnot3	100	98.000	Mus_musculus
ENSCVAG00000022122	cnot3b	70	75.665	MGP_PahariEiJ_G0020964	Cnot3	100	98.000	Mus_pahari
ENSCVAG00000022122	cnot3b	70	75.665	MGP_SPRETEiJ_G0030148	Cnot3	100	98.000	Mus_spretus
ENSCVAG00000022122	cnot3b	62	90.461	ENSMPUG00000010352	CNOT3	73	90.164	Mustela_putorius_furo
ENSCVAG00000022122	cnot3b	75	77.481	ENSNGAG00000013266	Cnot3	73	90.164	Nannospalax_galili
ENSCVAG00000022122	cnot3b	84	88.255	ENSNBRG00000003336	cnot3b	97	90.654	Neolamprologus_brichardi
ENSCVAG00000022122	cnot3b	61	88.398	ENSNLEG00000006272	CNOT3	72	90.164	Nomascus_leucogenys
ENSCVAG00000022122	cnot3b	50	100.000	ENSMEUG00000002952	CNOT3	54	100.000	Notamacropus_eugenii
ENSCVAG00000022122	cnot3b	66	83.140	ENSODEG00000000705	CNOT3	100	88.608	Octodon_degus
ENSCVAG00000022122	cnot3b	100	63.409	ENSONIG00000006568	cnot3a	100	64.097	Oreochromis_niloticus
ENSCVAG00000022122	cnot3b	100	82.093	ENSONIG00000007047	cnot3b	100	80.172	Oreochromis_niloticus
ENSCVAG00000022122	cnot3b	70	76.981	ENSOCUG00000007691	CNOT3	74	90.164	Oryctolagus_cuniculus
ENSCVAG00000022122	cnot3b	100	79.632	ENSORLG00000005982	cnot3b	100	80.239	Oryzias_latipes
ENSCVAG00000022122	cnot3b	100	80.911	ENSORLG00020005779	cnot3b	100	80.109	Oryzias_latipes_hni
ENSCVAG00000022122	cnot3b	100	80.496	ENSORLG00015019021	cnot3b	100	79.568	Oryzias_latipes_hsok
ENSCVAG00000022122	cnot3b	100	80.761	ENSOMEG00000015557	cnot3b	100	80.196	Oryzias_melastigma
ENSCVAG00000022122	cnot3b	70	78.601	ENSOMEG00000010309	cnot3a	100	63.397	Oryzias_melastigma
ENSCVAG00000022122	cnot3b	70	77.749	ENSOGAG00000006945	CNOT3	73	90.164	Otolemur_garnettii
ENSCVAG00000022122	cnot3b	62	65.260	ENSOARG00000002981	CNOT3	67	83.732	Ovis_aries
ENSCVAG00000022122	cnot3b	70	77.358	ENSPPAG00000002748	CNOT3	76	90.164	Pan_paniscus
ENSCVAG00000022122	cnot3b	70	77.736	ENSPPRG00000011705	CNOT3	74	90.164	Panthera_pardus
ENSCVAG00000022122	cnot3b	62	90.604	ENSPTIG00000008781	CNOT3	93	90.604	Panthera_tigris_altaica
ENSCVAG00000022122	cnot3b	70	77.358	ENSPTRG00000046717	-	76	90.164	Pan_troglodytes
ENSCVAG00000022122	cnot3b	70	77.358	ENSPTRG00000011444	CNOT3	76	90.164	Pan_troglodytes
ENSCVAG00000022122	cnot3b	70	77.358	ENSPANG00000009375	CNOT3	73	90.164	Papio_anubis
ENSCVAG00000022122	cnot3b	100	64.084	ENSPKIG00000011733	CNOT3	75	54.971	Paramormyrops_kingsleyae
ENSCVAG00000022122	cnot3b	97	64.883	ENSPKIG00000015967	-	97	95.946	Paramormyrops_kingsleyae
ENSCVAG00000022122	cnot3b	98	67.257	ENSPMGG00000022539	cnot3b	99	67.293	Periophthalmus_magnuspinnatus
ENSCVAG00000022122	cnot3b	68	77.394	ENSPEMG00000024185	Cnot3	73	90.492	Peromyscus_maniculatus_bairdii
ENSCVAG00000022122	cnot3b	62	90.132	ENSPCIG00000023018	CNOT3	87	89.764	Phascolarctos_cinereus
ENSCVAG00000022122	cnot3b	75	87.417	ENSPFOG00000008693	cnot3a	75	85.577	Poecilia_formosa
ENSCVAG00000022122	cnot3b	100	90.198	ENSPFOG00000007168	cnot3b	100	90.969	Poecilia_formosa
ENSCVAG00000022122	cnot3b	100	90.198	ENSPLAG00000013457	cnot3b	100	90.969	Poecilia_latipinna
ENSCVAG00000022122	cnot3b	100	91.520	ENSPMEG00000010184	cnot3b	100	91.079	Poecilia_mexicana
ENSCVAG00000022122	cnot3b	99	85.028	ENSPREG00000000662	cnot3b	97	85.810	Poecilia_reticulata
ENSCVAG00000022122	cnot3b	51	82.251	ENSPREG00000000766	-	100	83.766	Poecilia_reticulata
ENSCVAG00000022122	cnot3b	69	87.097	ENSPREG00000007592	cnot3a	84	87.097	Poecilia_reticulata
ENSCVAG00000022122	cnot3b	70	77.358	ENSPPYG00000010372	CNOT3	73	89.836	Pongo_abelii
ENSCVAG00000022122	cnot3b	54	95.763	ENSPCAG00000011999	CNOT3	56	95.763	Procavia_capensis
ENSCVAG00000022122	cnot3b	70	77.358	ENSPCOG00000017673	CNOT3	75	90.164	Propithecus_coquereli
ENSCVAG00000022122	cnot3b	70	73.858	ENSPVAG00000015564	CNOT3	70	89.508	Pteropus_vampyrus
ENSCVAG00000022122	cnot3b	99	73.160	ENSPNYG00000003358	cnot3b	99	70.639	Pundamilia_nyererei
ENSCVAG00000022122	cnot3b	81	82.394	ENSPNAG00000017679	cnot3a	100	67.382	Pygocentrus_nattereri
ENSCVAG00000022122	cnot3b	100	69.063	ENSPNAG00000027459	cnot3b	100	69.405	Pygocentrus_nattereri
ENSCVAG00000022122	cnot3b	70	75.665	ENSRNOG00000053234	Cnot3	73	90.492	Rattus_norvegicus
ENSCVAG00000022122	cnot3b	70	76.426	ENSRBIG00000031025	CNOT3	73	90.164	Rhinopithecus_bieti
ENSCVAG00000022122	cnot3b	70	76.426	ENSRROG00000003872	CNOT3	74	90.164	Rhinopithecus_roxellana
ENSCVAG00000022122	cnot3b	74	76.692	ENSSBOG00000030268	CNOT3	76	90.164	Saimiri_boliviensis_boliviensis
ENSCVAG00000022122	cnot3b	100	70.229	ENSSFOG00015000248	cnot3	100	69.264	Scleropages_formosus
ENSCVAG00000022122	cnot3b	100	78.533	ENSSMAG00000016031	cnot3b	100	78.215	Scophthalmus_maximus
ENSCVAG00000022122	cnot3b	100	81.770	ENSSDUG00000003428	cnot3b	100	81.237	Seriola_dumerili
ENSCVAG00000022122	cnot3b	76	91.453	ENSSDUG00000008181	cnot3a	83	93.694	Seriola_dumerili
ENSCVAG00000022122	cnot3b	100	81.770	ENSSLDG00000014376	cnot3b	100	81.237	Seriola_lalandi_dorsalis
ENSCVAG00000022122	cnot3b	75	76.800	ENSSPUG00000008510	CNOT3	77	90.164	Sphenodon_punctatus
ENSCVAG00000022122	cnot3b	100	83.155	ENSSPAG00000001429	cnot3b	100	81.886	Stegastes_partitus
ENSCVAG00000022122	cnot3b	58	87.795	ENSSPAG00000003858	cnot3a	86	87.795	Stegastes_partitus
ENSCVAG00000022122	cnot3b	62	90.461	ENSSSCG00000003264	CNOT3	73	90.164	Sus_scrofa
ENSCVAG00000022122	cnot3b	100	90.625	ENSTRUG00000007248	cnot3b	91	91.099	Takifugu_rubripes
ENSCVAG00000022122	cnot3b	94	73.769	ENSTNIG00000005663	cnot3b	100	73.333	Tetraodon_nigroviridis
ENSCVAG00000022122	cnot3b	62	90.132	ENSUAMG00000005234	CNOT3	74	89.836	Ursus_americanus
ENSCVAG00000022122	cnot3b	59	88.530	ENSUMAG00000010934	CNOT3	83	93.243	Ursus_maritimus
ENSCVAG00000022122	cnot3b	70	77.652	ENSVVUG00000008239	CNOT3	72	90.164	Vulpes_vulpes
ENSCVAG00000022122	cnot3b	76	88.889	ENSXETG00000003166	cnot3	75	89.320	Xenopus_tropicalis
ENSCVAG00000022122	cnot3b	100	61.464	ENSXCOG00000019460	cnot3a	82	93.243	Xiphophorus_couchianus
ENSCVAG00000022122	cnot3b	96	86.530	ENSXCOG00000018976	cnot3b	99	86.416	Xiphophorus_couchianus
ENSCVAG00000022122	cnot3b	100	90.769	ENSXMAG00000014176	cnot3b	100	90.659	Xiphophorus_maculatus
ENSCVAG00000022122	cnot3b	100	63.391	ENSXMAG00000012273	cnot3a	100	64.643	Xiphophorus_maculatus