EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCVAG00000022136 (Gene tree)
Gene ID: 107088846
Gene Symbol: -
Alias: -
Full Name: myosin light chain kinase%2C smooth muscle-like
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Plus strand
Length: 14948 bases
Position: chrKL652512.1:1816495-1831442
Accession: 107088846
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000032256	RIO1	PF01163.22	1.5e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000027884	-	3295	XM_015381281	ENSCVAP00000032256	860 (aa)	XP_015236767	UPI0007425F07

Gene Model

Click here to download ENSCVAG00000022136's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000022136's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCVAG00000022136	-	99	49.825	ENSCVAG00000022813	mylk5	99	49.825

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000022136	-	99	72.633	ENSAPOG00000019520	-	99	72.633	Acanthochromis_polyacanthus
ENSCVAG00000022136	-	99	49.944	ENSAPOG00000023231	mylk5	99	49.831	Acanthochromis_polyacanthus
ENSCVAG00000022136	-	99	67.637	ENSACIG00000024477	-	99	67.637	Amphilophus_citrinellus
ENSCVAG00000022136	-	99	49.887	ENSAOCG00000014130	mylk5	97	52.743	Amphiprion_ocellaris
ENSCVAG00000022136	-	99	73.095	ENSAOCG00000024465	-	99	73.095	Amphiprion_ocellaris
ENSCVAG00000022136	-	99	68.014	ENSAPEG00000014652	-	99	68.014	Amphiprion_percula
ENSCVAG00000022136	-	99	49.661	ENSAPEG00000017851	mylk5	97	51.930	Amphiprion_percula
ENSCVAG00000022136	-	99	50.462	ENSATEG00000002426	mylk5	99	50.462	Anabas_testudineus
ENSCVAG00000022136	-	99	67.014	ENSACLG00000007583	-	99	67.014	Astatotilapia_calliptera
ENSCVAG00000022136	-	99	49.380	ENSACLG00000003301	mylk5	99	51.205	Astatotilapia_calliptera
ENSCVAG00000022136	-	81	56.738	ENSAMXG00000019493	-	91	59.063	Astyanax_mexicanus
ENSCVAG00000022136	-	78	53.640	ENSCSEG00000017281	mylk5	93	53.640	Cynoglossus_semilaevis
ENSCVAG00000022136	-	99	84.051	ENSFHEG00000010974	-	100	84.051	Fundulus_heteroclitus
ENSCVAG00000022136	-	99	49.650	ENSFHEG00000011638	-	99	49.650	Fundulus_heteroclitus
ENSCVAG00000022136	-	99	49.320	ENSGAFG00000000269	mylk5	99	49.320	Gambusia_affinis
ENSCVAG00000022136	-	75	54.179	ENSGACG00000008527	mylk5	99	54.179	Gasterosteus_aculeatus
ENSCVAG00000022136	-	99	48.800	ENSHBUG00000002257	mylk5	99	48.914	Haplochromis_burtoni
ENSCVAG00000022136	-	99	65.385	ENSHBUG00000016459	-	99	65.385	Haplochromis_burtoni
ENSCVAG00000022136	-	75	69.385	ENSHCOG00000015710	-	85	69.385	Hippocampus_comes
ENSCVAG00000022136	-	99	49.070	ENSIPUG00000012659	mylk5	99	49.070	Ictalurus_punctatus
ENSCVAG00000022136	-	99	72.601	ENSKMAG00000016742	-	100	72.601	Kryptolebias_marmoratus
ENSCVAG00000022136	-	99	49.716	ENSKMAG00000019605	mylk5	99	49.716	Kryptolebias_marmoratus
ENSCVAG00000022136	-	99	63.986	ENSLBEG00000004115	-	99	64.666	Labrus_bergylta
ENSCVAG00000022136	-	99	50.867	ENSLBEG00000003526	mylk5	99	50.867	Labrus_bergylta
ENSCVAG00000022136	-	99	49.479	ENSMAMG00000000610	mylk5	99	49.479	Mastacembelus_armatus
ENSCVAG00000022136	-	99	49.493	ENSMZEG00005022663	mylk5	99	49.493	Maylandia_zebra
ENSCVAG00000022136	-	99	48.140	ENSMMOG00000020584	mylk5	99	48.140	Mola_mola
ENSCVAG00000022136	-	99	70.058	ENSMALG00000022416	-	95	70.058	Monopterus_albus
ENSCVAG00000022136	-	98	50.575	ENSMALG00000004945	mylk5	99	50.575	Monopterus_albus
ENSCVAG00000022136	-	99	67.200	ENSONIG00000016230	-	100	67.200	Oreochromis_niloticus
ENSCVAG00000022136	-	52	61.915	ENSONIG00000019875	-	97	61.915	Oreochromis_niloticus
ENSCVAG00000022136	-	93	51.456	ENSONIG00000001203	mylk5	97	61.915	Oreochromis_niloticus
ENSCVAG00000022136	-	99	47.955	ENSPFOG00000013597	mylk5	99	47.955	Poecilia_formosa
ENSCVAG00000022136	-	99	48.023	ENSPLAG00000023779	mylk5	99	48.023	Poecilia_latipinna
ENSCVAG00000022136	-	99	49.078	ENSPMEG00000023897	mylk5	100	48.110	Poecilia_mexicana
ENSCVAG00000022136	-	84	56.271	ENSPREG00000009707	mylk5	96	56.271	Poecilia_reticulata
ENSCVAG00000022136	-	99	80.303	ENSPREG00000003222	-	100	80.303	Poecilia_reticulata
ENSCVAG00000022136	-	99	48.073	ENSPNYG00000010046	mylk5	99	48.014	Pundamilia_nyererei
ENSCVAG00000022136	-	99	64.486	ENSPNYG00000019509	-	88	76.899	Pundamilia_nyererei
ENSCVAG00000022136	-	75	60.769	ENSSFOG00015004885	-	91	60.769	Scleropages_formosus
ENSCVAG00000022136	-	99	49.772	ENSSMAG00000006784	mylk5	99	49.772	Scophthalmus_maximus
ENSCVAG00000022136	-	99	69.686	ENSSMAG00000020328	-	100	69.686	Scophthalmus_maximus
ENSCVAG00000022136	-	99	70.127	ENSSDUG00000020847	-	99	70.127	Seriola_dumerili
ENSCVAG00000022136	-	99	69.781	ENSSLDG00000019897	-	99	69.781	Seriola_lalandi_dorsalis
ENSCVAG00000022136	-	99	73.317	ENSSPAG00000019068	-	99	73.317	Stegastes_partitus
ENSCVAG00000022136	-	99	50.058	ENSSPAG00000020815	mylk5	99	50.058	Stegastes_partitus
ENSCVAG00000022136	-	99	47.263	ENSTRUG00000015150	mylk5	99	47.646	Takifugu_rubripes
ENSCVAG00000022136	-	68	53.731	ENSTNIG00000011699	mylk5	99	53.731	Tetraodon_nigroviridis
ENSCVAG00000022136	-	90	83.002	ENSXCOG00000005927	-	98	83.002	Xiphophorus_couchianus
ENSCVAG00000022136	-	86	82.100	ENSXMAG00000015589	-	94	82.100	Xiphophorus_maculatus
ENSCVAG00000022136	-	99	48.575	ENSXMAG00000007789	mylk5	99	48.575	Xiphophorus_maculatus