EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCVAG00000022150 (Gene tree)
Gene ID: 107089596
Gene Symbol: pus3
Alias: fj78b12|wu:fj78b12|zgc:56653
Full Name: pseudouridine synthase 3
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Minus strand
Length: 5365 bases
Position: chrKL652512.1:1793346-1798710
Accession: 107089596
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000032266	PseudoU_synth_1	PF01416.20	1.8e-30	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000032892	-	1632	XM_015382482	ENSCVAP00000032266	471 (aa)	XP_015237968	UPI00074273C7

Gene Model

Click here to download ENSCVAG00000022150's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000022150's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000022150	pus3	91	50.885	ENSG00000110060	PUS3	94	46.703	Homo_sapiens
ENSCVAG00000022150	pus3	100	78.361	ENSAPOG00000019483	pus3	100	78.361	Acanthochromis_polyacanthus
ENSCVAG00000022150	pus3	91	49.889	ENSAMEG00000000144	PUS3	89	49.889	Ailuropoda_melanoleuca
ENSCVAG00000022150	pus3	79	82.143	ENSACIG00000024479	pus3	100	82.143	Amphilophus_citrinellus
ENSCVAG00000022150	pus3	100	78.361	ENSAOCG00000006589	pus3	100	78.361	Amphiprion_ocellaris
ENSCVAG00000022150	pus3	100	78.903	ENSAPEG00000014617	pus3	100	78.903	Amphiprion_percula
ENSCVAG00000022150	pus3	100	76.533	ENSATEG00000022731	pus3	100	76.533	Anabas_testudineus
ENSCVAG00000022150	pus3	90	51.002	ENSAPLG00000013285	PUS3	97	51.002	Anas_platyrhynchos
ENSCVAG00000022150	pus3	91	52.088	ENSACAG00000000186	PUS3	94	52.088	Anolis_carolinensis
ENSCVAG00000022150	pus3	91	50.328	ENSANAG00000035614	PUS3	89	50.328	Aotus_nancymaae
ENSCVAG00000022150	pus3	99	77.101	ENSACLG00000007356	pus3	100	77.101	Astatotilapia_calliptera
ENSCVAG00000022150	pus3	95	68.062	ENSAMXG00000019534	pus3	94	68.062	Astyanax_mexicanus
ENSCVAG00000022150	pus3	91	49.446	ENSBTAG00000014339	PUS3	89	49.446	Bos_taurus
ENSCVAG00000022150	pus3	77	37.008	WBGene00006473	tag-124	97	36.386	Caenorhabditis_elegans
ENSCVAG00000022150	pus3	91	51.747	ENSCJAG00000046645	PUS3	89	51.747	Callithrix_jacchus
ENSCVAG00000022150	pus3	90	50.000	ENSCAFG00000010534	PUS3	89	50.000	Canis_familiaris
ENSCVAG00000022150	pus3	90	50.000	ENSCAFG00020010659	PUS3	89	50.000	Canis_lupus_dingo
ENSCVAG00000022150	pus3	91	49.224	ENSCHIG00000012260	PUS3	89	49.224	Capra_hircus
ENSCVAG00000022150	pus3	91	51.429	ENSTSYG00000014744	PUS3	88	51.429	Carlito_syrichta
ENSCVAG00000022150	pus3	91	50.776	ENSCAPG00000012231	PUS3	89	50.776	Cavia_aperea
ENSCVAG00000022150	pus3	91	50.776	ENSCPOG00000032587	PUS3	89	50.776	Cavia_porcellus
ENSCVAG00000022150	pus3	91	50.547	ENSCCAG00000035999	PUS3	89	50.547	Cebus_capucinus
ENSCVAG00000022150	pus3	91	51.327	ENSCATG00000043123	PUS3	89	51.327	Cercocebus_atys
ENSCVAG00000022150	pus3	90	51.333	ENSCLAG00000014947	PUS3	89	51.333	Chinchilla_lanigera
ENSCVAG00000022150	pus3	91	51.220	ENSCSAG00000002281	PUS3	89	51.220	Chlorocebus_sabaeus
ENSCVAG00000022150	pus3	81	52.196	ENSCHOG00000008442	PUS3	95	52.196	Choloepus_hoffmanni
ENSCVAG00000022150	pus3	52	48.529	ENSCPBG00000011173	PUS3	93	48.529	Chrysemys_picta_bellii
ENSCVAG00000022150	pus3	64	37.462	ENSCING00000009062	-	64	37.462	Ciona_intestinalis
ENSCVAG00000022150	pus3	83	33.256	ENSCSAVG00000002211	-	95	33.488	Ciona_savignyi
ENSCVAG00000022150	pus3	91	50.111	ENSCANG00000038729	PUS3	89	50.111	Colobus_angolensis_palliatus
ENSCVAG00000022150	pus3	90	51.663	ENSCGRG00001019842	Pus3	89	51.663	Cricetulus_griseus_chok1gshd
ENSCVAG00000022150	pus3	90	51.220	ENSCGRG00000010155	Pus3	89	51.220	Cricetulus_griseus_crigri
ENSCVAG00000022150	pus3	100	69.520	ENSCSEG00000007948	pus3	100	70.146	Cynoglossus_semilaevis
ENSCVAG00000022150	pus3	95	69.757	ENSDARG00000028976	pus3	94	69.757	Danio_rerio
ENSCVAG00000022150	pus3	91	50.549	ENSDNOG00000040719	PUS3	89	50.549	Dasypus_novemcinctus
ENSCVAG00000022150	pus3	90	51.535	ENSDORG00000001819	Pus3	89	51.535	Dipodomys_ordii
ENSCVAG00000022150	pus3	78	42.686	FBgn0034703	CG3045	81	42.686	Drosophila_melanogaster
ENSCVAG00000022150	pus3	91	44.858	ENSETEG00000013067	PUS3	89	44.858	Echinops_telfairi
ENSCVAG00000022150	pus3	81	54.667	ENSEBUG00000002154	pus3	69	54.667	Eptatretus_burgeri
ENSCVAG00000022150	pus3	91	49.220	ENSEASG00005023003	PUS3	89	49.220	Equus_asinus_asinus
ENSCVAG00000022150	pus3	91	49.667	ENSECAG00000007581	PUS3	89	49.667	Equus_caballus
ENSCVAG00000022150	pus3	91	50.110	ENSEEUG00000010543	PUS3	89	50.110	Erinaceus_europaeus
ENSCVAG00000022150	pus3	98	68.980	ENSELUG00000004425	pus3	99	68.980	Esox_lucius
ENSCVAG00000022150	pus3	90	50.885	ENSFCAG00000005340	PUS3	88	50.885	Felis_catus
ENSCVAG00000022150	pus3	91	51.974	ENSFALG00000005159	PUS3	91	51.974	Ficedula_albicollis
ENSCVAG00000022150	pus3	90	51.663	ENSFDAG00000020745	PUS3	89	51.663	Fukomys_damarensis
ENSCVAG00000022150	pus3	100	86.412	ENSFHEG00000010984	pus3	93	86.412	Fundulus_heteroclitus
ENSCVAG00000022150	pus3	96	65.198	ENSGMOG00000004534	pus3	100	65.198	Gadus_morhua
ENSCVAG00000022150	pus3	90	51.991	ENSGALG00000000962	PUS3	94	51.991	Gallus_gallus
ENSCVAG00000022150	pus3	100	83.755	ENSGAFG00000005615	pus3	100	84.810	Gambusia_affinis
ENSCVAG00000022150	pus3	100	72.842	ENSGACG00000002125	pus3	99	72.842	Gasterosteus_aculeatus
ENSCVAG00000022150	pus3	98	50.816	ENSGAGG00000000160	PUS3	95	50.816	Gopherus_agassizii
ENSCVAG00000022150	pus3	91	50.444	ENSGGOG00000015047	PUS3	89	50.444	Gorilla_gorilla
ENSCVAG00000022150	pus3	99	77.101	ENSHBUG00000016532	pus3	100	77.101	Haplochromis_burtoni
ENSCVAG00000022150	pus3	90	45.372	ENSHGLG00000006599	-	85	45.372	Heterocephalus_glaber_female
ENSCVAG00000022150	pus3	90	50.998	ENSHGLG00000000565	PUS3	89	50.998	Heterocephalus_glaber_female
ENSCVAG00000022150	pus3	58	58.608	ENSHGLG00000015753	-	75	58.608	Heterocephalus_glaber_female
ENSCVAG00000022150	pus3	96	43.777	ENSHGLG00000018861	-	97	43.777	Heterocephalus_glaber_female
ENSCVAG00000022150	pus3	56	60.526	ENSHGLG00100008656	-	86	60.526	Heterocephalus_glaber_male
ENSCVAG00000022150	pus3	51	55.967	ENSHGLG00100002435	-	85	55.967	Heterocephalus_glaber_male
ENSCVAG00000022150	pus3	71	47.788	ENSHGLG00100007519	-	72	47.788	Heterocephalus_glaber_male
ENSCVAG00000022150	pus3	80	47.436	ENSHGLG00100011339	-	90	47.436	Heterocephalus_glaber_male
ENSCVAG00000022150	pus3	80	52.130	ENSHGLG00100014825	-	84	52.130	Heterocephalus_glaber_male
ENSCVAG00000022150	pus3	97	72.867	ENSHCOG00000015705	pus3	98	72.867	Hippocampus_comes
ENSCVAG00000022150	pus3	95	68.502	ENSIPUG00000000105	pus3	94	69.824	Ictalurus_punctatus
ENSCVAG00000022150	pus3	90	50.998	ENSSTOG00000003721	PUS3	89	50.998	Ictidomys_tridecemlineatus
ENSCVAG00000022150	pus3	79	56.061	ENSJJAG00000011306	Pus3	89	51.220	Jaculus_jaculus
ENSCVAG00000022150	pus3	99	77.871	ENSKMAG00000016715	pus3	99	77.871	Kryptolebias_marmoratus
ENSCVAG00000022150	pus3	94	75.566	ENSLBEG00000004143	pus3	97	75.166	Labrus_bergylta
ENSCVAG00000022150	pus3	93	53.304	ENSLACG00000011161	PUS3	89	53.304	Latimeria_chalumnae
ENSCVAG00000022150	pus3	95	69.451	ENSLOCG00000011922	pus3	99	69.451	Lepisosteus_oculatus
ENSCVAG00000022150	pus3	58	30.405	ENSLAFG00000028731	PUS1	70	30.405	Loxodonta_africana
ENSCVAG00000022150	pus3	91	50.439	ENSLAFG00000000535	PUS3	89	50.439	Loxodonta_africana
ENSCVAG00000022150	pus3	91	51.327	ENSMFAG00000041002	PUS3	89	51.327	Macaca_fascicularis
ENSCVAG00000022150	pus3	91	51.327	ENSMMUG00000041875	PUS3	89	51.327	Macaca_mulatta
ENSCVAG00000022150	pus3	91	51.327	ENSMNEG00000045347	PUS3	89	51.327	Macaca_nemestrina
ENSCVAG00000022150	pus3	91	51.327	ENSMLEG00000029053	PUS3	89	51.327	Mandrillus_leucophaeus
ENSCVAG00000022150	pus3	99	75.949	ENSMAMG00000016741	pus3	100	77.004	Mastacembelus_armatus
ENSCVAG00000022150	pus3	99	76.891	ENSMZEG00005015950	pus3	100	76.891	Maylandia_zebra
ENSCVAG00000022150	pus3	80	54.805	ENSMGAG00000000851	PUS3	93	54.737	Meleagris_gallopavo
ENSCVAG00000022150	pus3	90	50.998	ENSMAUG00000015873	Pus3	89	50.998	Mesocricetus_auratus
ENSCVAG00000022150	pus3	90	50.224	ENSMICG00000032941	PUS3	88	50.224	Microcebus_murinus
ENSCVAG00000022150	pus3	90	51.991	ENSMOCG00000004901	Pus3	89	51.991	Microtus_ochrogaster
ENSCVAG00000022150	pus3	100	74.059	ENSMMOG00000013909	pus3	100	74.059	Mola_mola
ENSCVAG00000022150	pus3	91	49.558	ENSMODG00000004222	PUS3	97	49.558	Monodelphis_domestica
ENSCVAG00000022150	pus3	99	74.843	ENSMALG00000022420	pus3	100	74.843	Monopterus_albus
ENSCVAG00000022150	pus3	90	51.441	MGP_CAROLIEiJ_G0031957	Pus3	97	54.908	Mus_caroli
ENSCVAG00000022150	pus3	90	51.441	ENSMUSG00000032103	Pus3	97	54.908	Mus_musculus
ENSCVAG00000022150	pus3	81	54.926	MGP_PahariEiJ_G0014822	Pus3	97	55.215	Mus_pahari
ENSCVAG00000022150	pus3	96	49.896	MGP_SPRETEiJ_G0033081	Pus3	97	55.015	Mus_spretus
ENSCVAG00000022150	pus3	91	50.333	ENSMPUG00000006568	PUS3	89	50.333	Mustela_putorius_furo
ENSCVAG00000022150	pus3	91	51.441	ENSMLUG00000030636	PUS3	89	51.441	Myotis_lucifugus
ENSCVAG00000022150	pus3	90	52.328	ENSNGAG00000013868	Pus3	89	52.328	Nannospalax_galili
ENSCVAG00000022150	pus3	99	76.681	ENSNBRG00000015864	pus3	100	76.681	Neolamprologus_brichardi
ENSCVAG00000022150	pus3	91	50.993	ENSNLEG00000007460	PUS3	89	50.993	Nomascus_leucogenys
ENSCVAG00000022150	pus3	77	54.054	ENSMEUG00000014040	PUS3	72	54.054	Notamacropus_eugenii
ENSCVAG00000022150	pus3	91	50.776	ENSOPRG00000007888	-	89	50.776	Ochotona_princeps
ENSCVAG00000022150	pus3	90	50.998	ENSODEG00000004280	PUS3	89	50.998	Octodon_degus
ENSCVAG00000022150	pus3	99	76.874	ENSONIG00000016224	pus3	99	76.874	Oreochromis_niloticus
ENSCVAG00000022150	pus3	90	53.229	ENSOANG00000000406	PUS3	85	56.642	Ornithorhynchus_anatinus
ENSCVAG00000022150	pus3	91	50.111	ENSOCUG00000004468	PUS3	84	50.111	Oryctolagus_cuniculus
ENSCVAG00000022150	pus3	100	75.681	ENSORLG00000008445	pus3	100	75.681	Oryzias_latipes
ENSCVAG00000022150	pus3	100	76.310	ENSORLG00020008847	pus3	100	76.310	Oryzias_latipes_hni
ENSCVAG00000022150	pus3	100	75.738	ENSORLG00015007438	pus3	100	75.738	Oryzias_latipes_hsok
ENSCVAG00000022150	pus3	100	76.433	ENSOMEG00000014321	pus3	100	76.433	Oryzias_melastigma
ENSCVAG00000022150	pus3	91	50.221	ENSOGAG00000008913	PUS3	89	50.221	Otolemur_garnettii
ENSCVAG00000022150	pus3	91	49.446	ENSOARG00000011870	PUS3	89	49.446	Ovis_aries
ENSCVAG00000022150	pus3	91	50.664	ENSPPAG00000025809	PUS3	89	50.664	Pan_paniscus
ENSCVAG00000022150	pus3	90	50.444	ENSPPRG00000005662	PUS3	88	50.444	Panthera_pardus
ENSCVAG00000022150	pus3	90	50.885	ENSPTIG00000001192	PUS3	88	50.885	Panthera_tigris_altaica
ENSCVAG00000022150	pus3	91	50.664	ENSPTRG00000004449	PUS3	89	50.664	Pan_troglodytes
ENSCVAG00000022150	pus3	91	50.885	ENSPANG00000013782	PUS3	89	50.885	Papio_anubis
ENSCVAG00000022150	pus3	95	68.750	ENSPKIG00000000646	pus3	96	68.750	Paramormyrops_kingsleyae
ENSCVAG00000022150	pus3	97	49.383	ENSPSIG00000013961	PUS3	95	49.383	Pelodiscus_sinensis
ENSCVAG00000022150	pus3	87	75.240	ENSPMGG00000000911	pus3	96	75.240	Periophthalmus_magnuspinnatus
ENSCVAG00000022150	pus3	90	50.881	ENSPEMG00000009602	Pus3	89	50.881	Peromyscus_maniculatus_bairdii
ENSCVAG00000022150	pus3	92	50.330	ENSPCIG00000010225	PUS3	96	50.330	Phascolarctos_cinereus
ENSCVAG00000022150	pus3	95	82.379	ENSPFOG00000009447	pus3	100	82.379	Poecilia_formosa
ENSCVAG00000022150	pus3	100	83.966	ENSPLAG00000023343	pus3	100	83.966	Poecilia_latipinna
ENSCVAG00000022150	pus3	100	84.388	ENSPMEG00000009870	pus3	100	84.388	Poecilia_mexicana
ENSCVAG00000022150	pus3	70	84.776	ENSPREG00000003179	pus3	64	84.776	Poecilia_reticulata
ENSCVAG00000022150	pus3	91	50.664	ENSPPYG00000004039	PUS3	89	50.664	Pongo_abelii
ENSCVAG00000022150	pus3	91	49.779	ENSPCAG00000000441	PUS3	89	49.779	Procavia_capensis
ENSCVAG00000022150	pus3	91	50.334	ENSPCOG00000019330	PUS3	89	50.334	Propithecus_coquereli
ENSCVAG00000022150	pus3	91	50.557	ENSPVAG00000002606	PUS3	89	50.557	Pteropus_vampyrus
ENSCVAG00000022150	pus3	99	77.521	ENSPNYG00000019615	pus3	100	77.521	Pundamilia_nyererei
ENSCVAG00000022150	pus3	95	68.132	ENSPNAG00000014541	pus3	94	68.132	Pygocentrus_nattereri
ENSCVAG00000022150	pus3	90	50.547	ENSRNOG00000012994	Pus3	89	50.547	Rattus_norvegicus
ENSCVAG00000022150	pus3	90	51.230	ENSRBIG00000044456	PUS3	88	51.230	Rhinopithecus_bieti
ENSCVAG00000022150	pus3	91	50.885	ENSRROG00000035245	PUS3	89	50.885	Rhinopithecus_roxellana
ENSCVAG00000022150	pus3	63	43.464	YFL001W	DEG1	64	43.464	Saccharomyces_cerevisiae
ENSCVAG00000022150	pus3	91	50.328	ENSSBOG00000022433	PUS3	89	50.328	Saimiri_boliviensis_boliviensis
ENSCVAG00000022150	pus3	91	49.559	ENSSHAG00000001382	PUS3	89	49.559	Sarcophilus_harrisii
ENSCVAG00000022150	pus3	95	70.022	ENSSFOG00015004850	pus3	96	70.022	Scleropages_formosus
ENSCVAG00000022150	pus3	99	73.805	ENSSMAG00000020340	pus3	99	74.012	Scophthalmus_maximus
ENSCVAG00000022150	pus3	100	76.349	ENSSDUG00000020825	pus3	100	77.197	Seriola_dumerili
ENSCVAG00000022150	pus3	100	77.824	ENSSLDG00000019932	pus3	100	77.824	Seriola_lalandi_dorsalis
ENSCVAG00000022150	pus3	69	52.439	ENSSARG00000013826	PUS3	97	52.439	Sorex_araneus
ENSCVAG00000022150	pus3	90	52.796	ENSSPUG00000001412	PUS3	88	52.796	Sphenodon_punctatus
ENSCVAG00000022150	pus3	100	74.735	ENSSPAG00000019221	pus3	100	74.735	Stegastes_partitus
ENSCVAG00000022150	pus3	91	50.554	ENSSSCG00000015222	PUS3	89	50.554	Sus_scrofa
ENSCVAG00000022150	pus3	90	52.759	ENSTGUG00000000778	-	97	52.759	Taeniopygia_guttata
ENSCVAG00000022150	pus3	95	75.223	ENSTRUG00000013050	pus3	99	75.223	Takifugu_rubripes
ENSCVAG00000022150	pus3	99	71.888	ENSTNIG00000004929	PUS3	99	71.888	Tetraodon_nigroviridis
ENSCVAG00000022150	pus3	85	73.383	ENSTNIG00000010307	pus3	97	73.383	Tetraodon_nigroviridis
ENSCVAG00000022150	pus3	91	52.183	ENSTBEG00000004382	PUS3	93	52.183	Tupaia_belangeri
ENSCVAG00000022150	pus3	91	50.554	ENSTTRG00000012167	PUS3	89	50.554	Tursiops_truncatus
ENSCVAG00000022150	pus3	91	49.667	ENSUAMG00000009297	PUS3	89	49.667	Ursus_americanus
ENSCVAG00000022150	pus3	91	49.889	ENSUMAG00000001795	PUS3	89	49.889	Ursus_maritimus
ENSCVAG00000022150	pus3	91	49.333	ENSVPAG00000001495	PUS3	89	49.333	Vicugna_pacos
ENSCVAG00000022150	pus3	90	50.222	ENSVVUG00000020152	PUS3	89	50.222	Vulpes_vulpes
ENSCVAG00000022150	pus3	90	50.227	ENSXETG00000024532	pus3	80	50.227	Xenopus_tropicalis
ENSCVAG00000022150	pus3	68	86.250	ENSXMAG00000029934	pus3	74	86.250	Xiphophorus_maculatus
ENSCVAG00000022150	pus3	98	83.906	ENSXMAG00000028016	pus3	100	84.335	Xiphophorus_maculatus
ENSCVAG00000022150	pus3	68	86.520	ENSXMAG00000025659	PUS3	53	87.302	Xiphophorus_maculatus
ENSCVAG00000022150	pus3	54	87.109	ENSXMAG00000025146	pus3	79	87.109	Xiphophorus_maculatus
ENSCVAG00000022150	pus3	68	86.520	ENSXMAG00000025077	pus3	74	86.520	Xiphophorus_maculatus
ENSCVAG00000022150	pus3	54	87.109	ENSXMAG00000028945	pus3	85	87.109	Xiphophorus_maculatus