EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCVAG00000022248 (Gene tree)
Gene ID: 107090114
Gene Symbol: pop1
Alias: -
Full Name: POP1 homolog%2C ribonuclease P/MRP subunit
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Minus strand
Length: 15563 bases
Position: chrKL652782.1:447961-463523
Accession: 107090114
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000032313	POP1	PF06978.11	5e-38	1	2
ENSCVAP00000032313	POP1	PF06978.11	5e-38	2	2
ENSCVAP00000032313	POPLD	PF08170.12	1.4e-28	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000028000	-	3867	XM_015383314	ENSCVAP00000032313	970 (aa)	XP_015238800	UPI000742C02A

Gene Model

Click here to download ENSCVAG00000022248's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000022248's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000022248	pop1	100	47.092	ENSG00000104356	POP1	100	47.333	Homo_sapiens
ENSCVAG00000022248	pop1	100	75.355	ENSAPOG00000008198	pop1	100	75.355	Acanthochromis_polyacanthus
ENSCVAG00000022248	pop1	100	47.283	ENSAMEG00000000556	POP1	100	47.048	Ailuropoda_melanoleuca
ENSCVAG00000022248	pop1	100	68.008	ENSACIG00000004169	POP1	100	68.159	Amphilophus_citrinellus
ENSCVAG00000022248	pop1	100	75.659	ENSAOCG00000010991	pop1	100	75.659	Amphiprion_ocellaris
ENSCVAG00000022248	pop1	100	68.506	ENSAPEG00000007607	pop1	100	67.803	Amphiprion_percula
ENSCVAG00000022248	pop1	100	70.968	ENSATEG00000024814	POP1	100	71.069	Anabas_testudineus
ENSCVAG00000022248	pop1	94	49.581	ENSAPLG00000014418	POP1	99	49.266	Anas_platyrhynchos
ENSCVAG00000022248	pop1	100	46.578	ENSACAG00000016083	POP1	100	45.913	Anolis_carolinensis
ENSCVAG00000022248	pop1	88	55.856	ENSANAG00000026360	POP1	99	55.856	Aotus_nancymaae
ENSCVAG00000022248	pop1	100	72.036	ENSACLG00000010951	pop1	100	72.138	Astatotilapia_calliptera
ENSCVAG00000022248	pop1	100	56.680	ENSAMXG00000014483	POP1	100	56.385	Astyanax_mexicanus
ENSCVAG00000022248	pop1	100	48.092	ENSBTAG00000012596	POP1	100	48.031	Bos_taurus
ENSCVAG00000022248	pop1	100	47.881	ENSCJAG00000015567	POP1	100	48.127	Callithrix_jacchus
ENSCVAG00000022248	pop1	100	48.524	ENSCAFG00000000469	POP1	100	48.524	Canis_familiaris
ENSCVAG00000022248	pop1	100	47.697	ENSCAFG00020026765	POP1	100	47.505	Canis_lupus_dingo
ENSCVAG00000022248	pop1	94	52.517	ENSCHIG00000017066	POP1	100	48.141	Capra_hircus
ENSCVAG00000022248	pop1	100	47.003	ENSTSYG00000003097	POP1	100	47.438	Carlito_syrichta
ENSCVAG00000022248	pop1	100	45.698	ENSCAPG00000007251	POP1	100	45.793	Cavia_aperea
ENSCVAG00000022248	pop1	100	47.076	ENSCPOG00000002901	POP1	100	47.076	Cavia_porcellus
ENSCVAG00000022248	pop1	100	48.309	ENSCCAG00000018939	POP1	100	48.116	Cebus_capucinus
ENSCVAG00000022248	pop1	100	47.154	ENSCATG00000040916	POP1	100	47.154	Cercocebus_atys
ENSCVAG00000022248	pop1	100	46.786	ENSCLAG00000007208	POP1	97	47.323	Chinchilla_lanigera
ENSCVAG00000022248	pop1	92	49.153	ENSCSAG00000012340	POP1	98	48.765	Chlorocebus_sabaeus
ENSCVAG00000022248	pop1	94	47.004	ENSCHOG00000011432	POP1	96	47.107	Choloepus_hoffmanni
ENSCVAG00000022248	pop1	100	49.466	ENSCPBG00000006373	POP1	100	49.709	Chrysemys_picta_bellii
ENSCVAG00000022248	pop1	82	36.400	ENSCING00000008323	-	87	35.200	Ciona_intestinalis
ENSCVAG00000022248	pop1	100	47.154	ENSCANG00000001647	POP1	100	47.154	Colobus_angolensis_palliatus
ENSCVAG00000022248	pop1	100	46.280	ENSCGRG00001017308	Pop1	100	46.146	Cricetulus_griseus_chok1gshd
ENSCVAG00000022248	pop1	100	43.452	ENSCGRG00000010824	Pop1	100	44.016	Cricetulus_griseus_crigri
ENSCVAG00000022248	pop1	100	69.425	ENSCSEG00000008737	POP1	100	69.425	Cynoglossus_semilaevis
ENSCVAG00000022248	pop1	53	55.664	ENSDARG00000102087	pop1	99	54.688	Danio_rerio
ENSCVAG00000022248	pop1	100	44.578	ENSDNOG00000019974	POP1	100	44.671	Dasypus_novemcinctus
ENSCVAG00000022248	pop1	100	41.013	ENSDORG00000015384	Pop1	100	41.126	Dipodomys_ordii
ENSCVAG00000022248	pop1	88	47.314	ENSETEG00000007839	POP1	88	47.314	Echinops_telfairi
ENSCVAG00000022248	pop1	100	47.743	ENSEASG00005003189	POP1	98	47.743	Equus_asinus_asinus
ENSCVAG00000022248	pop1	100	47.734	ENSECAG00000024236	POP1	100	47.734	Equus_caballus
ENSCVAG00000022248	pop1	51	75.325	ENSEEUG00000003050	-	53	80.303	Erinaceus_europaeus
ENSCVAG00000022248	pop1	100	60.768	ENSELUG00000003526	pop1	100	60.971	Esox_lucius
ENSCVAG00000022248	pop1	100	47.328	ENSFCAG00000002168	POP1	100	47.519	Felis_catus
ENSCVAG00000022248	pop1	100	46.360	ENSFALG00000005711	POP1	100	46.860	Ficedula_albicollis
ENSCVAG00000022248	pop1	100	45.747	ENSFDAG00000017068	POP1	100	46.514	Fukomys_damarensis
ENSCVAG00000022248	pop1	100	80.923	ENSFHEG00000019518	pop1	100	81.436	Fundulus_heteroclitus
ENSCVAG00000022248	pop1	100	61.929	ENSGMOG00000000659	POP1	100	60.878	Gadus_morhua
ENSCVAG00000022248	pop1	100	77.333	ENSGAFG00000019770	POP1	100	76.923	Gambusia_affinis
ENSCVAG00000022248	pop1	100	62.998	ENSGACG00000003499	pop1	100	62.808	Gasterosteus_aculeatus
ENSCVAG00000022248	pop1	100	48.752	ENSGAGG00000011737	POP1	98	48.799	Gopherus_agassizii
ENSCVAG00000022248	pop1	100	46.472	ENSGGOG00000003176	POP1	100	47.293	Gorilla_gorilla
ENSCVAG00000022248	pop1	100	72.138	ENSHBUG00000021583	pop1	100	72.138	Haplochromis_burtoni
ENSCVAG00000022248	pop1	100	45.885	ENSHGLG00000006029	POP1	100	46.367	Heterocephalus_glaber_female
ENSCVAG00000022248	pop1	100	45.885	ENSHGLG00100016879	POP1	100	46.367	Heterocephalus_glaber_male
ENSCVAG00000022248	pop1	100	62.127	ENSHCOG00000013888	pop1	100	61.730	Hippocampus_comes
ENSCVAG00000022248	pop1	99	55.338	ENSIPUG00000018336	pop1	100	55.186	Ictalurus_punctatus
ENSCVAG00000022248	pop1	100	47.660	ENSSTOG00000011455	POP1	97	47.660	Ictidomys_tridecemlineatus
ENSCVAG00000022248	pop1	100	47.001	ENSJJAG00000013325	Pop1	100	47.001	Jaculus_jaculus
ENSCVAG00000022248	pop1	100	74.082	ENSKMAG00000001346	POP1	100	74.335	Kryptolebias_marmoratus
ENSCVAG00000022248	pop1	100	65.884	ENSLBEG00000024457	POP1	100	65.373	Labrus_bergylta
ENSCVAG00000022248	pop1	93	50.926	ENSLACG00000012498	POP1	98	51.337	Latimeria_chalumnae
ENSCVAG00000022248	pop1	100	55.762	ENSLOCG00000009817	POP1	100	55.762	Lepisosteus_oculatus
ENSCVAG00000022248	pop1	100	47.628	ENSLAFG00000010770	POP1	100	48.243	Loxodonta_africana
ENSCVAG00000022248	pop1	100	47.343	ENSMFAG00000000347	POP1	100	47.154	Macaca_fascicularis
ENSCVAG00000022248	pop1	100	47.304	ENSMNEG00000036870	POP1	100	47.114	Macaca_nemestrina
ENSCVAG00000022248	pop1	100	47.249	ENSMLEG00000034986	POP1	100	47.059	Mandrillus_leucophaeus
ENSCVAG00000022248	pop1	100	71.140	ENSMAMG00000004040	pop1	100	70.838	Mastacembelus_armatus
ENSCVAG00000022248	pop1	100	72.239	ENSMZEG00005025448	pop1	100	72.239	Maylandia_zebra
ENSCVAG00000022248	pop1	100	46.293	ENSMGAG00000012167	POP1	100	46.578	Meleagris_gallopavo
ENSCVAG00000022248	pop1	100	46.405	ENSMAUG00000017537	Pop1	100	46.405	Mesocricetus_auratus
ENSCVAG00000022248	pop1	100	47.278	ENSMICG00000004361	POP1	100	47.419	Microcebus_murinus
ENSCVAG00000022248	pop1	100	46.583	ENSMOCG00000006356	Pop1	100	46.737	Microtus_ochrogaster
ENSCVAG00000022248	pop1	100	63.412	ENSMMOG00000018242	pop1	100	62.872	Mola_mola
ENSCVAG00000022248	pop1	100	46.629	ENSMODG00000006561	POP1	100	46.629	Monodelphis_domestica
ENSCVAG00000022248	pop1	100	69.379	ENSMALG00000012621	POP1	100	68.769	Monopterus_albus
ENSCVAG00000022248	pop1	100	45.341	MGP_CAROLIEiJ_G0019726	Pop1	100	45.341	Mus_caroli
ENSCVAG00000022248	pop1	100	45.463	ENSMUSG00000022325	Pop1	100	45.463	Mus_musculus
ENSCVAG00000022248	pop1	100	45.245	MGP_PahariEiJ_G0019735	Pop1	100	45.245	Mus_pahari
ENSCVAG00000022248	pop1	100	45.559	MGP_SPRETEiJ_G0020622	Pop1	100	45.559	Mus_spretus
ENSCVAG00000022248	pop1	100	47.773	ENSMPUG00000015250	POP1	100	47.773	Mustela_putorius_furo
ENSCVAG00000022248	pop1	100	46.021	ENSMLUG00000010204	POP1	100	46.176	Myotis_lucifugus
ENSCVAG00000022248	pop1	100	46.364	ENSNGAG00000001582	Pop1	100	46.857	Nannospalax_galili
ENSCVAG00000022248	pop1	100	67.074	ENSNBRG00000002356	pop1	100	67.074	Neolamprologus_brichardi
ENSCVAG00000022248	pop1	100	47.159	ENSNLEG00000002541	POP1	100	47.159	Nomascus_leucogenys
ENSCVAG00000022248	pop1	88	57.941	ENSMEUG00000003118	POP1	90	57.941	Notamacropus_eugenii
ENSCVAG00000022248	pop1	100	46.731	ENSOPRG00000007667	POP1	100	46.731	Ochotona_princeps
ENSCVAG00000022248	pop1	100	45.559	ENSODEG00000003984	POP1	100	45.602	Octodon_degus
ENSCVAG00000022248	pop1	100	72.746	ENSONIG00000016445	pop1	100	72.746	Oreochromis_niloticus
ENSCVAG00000022248	pop1	60	45.276	ENSOANG00000001278	-	94	45.276	Ornithorhynchus_anatinus
ENSCVAG00000022248	pop1	100	46.110	ENSOCUG00000017400	POP1	100	46.358	Oryctolagus_cuniculus
ENSCVAG00000022248	pop1	100	70.769	ENSORLG00000002839	pop1	100	71.178	Oryzias_latipes
ENSCVAG00000022248	pop1	100	64.677	ENSORLG00020022450	POP1	100	64.478	Oryzias_latipes_hni
ENSCVAG00000022248	pop1	100	70.974	ENSORLG00015012746	POP1	100	71.282	Oryzias_latipes_hsok
ENSCVAG00000022248	pop1	100	68.615	ENSOMEG00000006915	pop1	99	68.980	Oryzias_melastigma
ENSCVAG00000022248	pop1	100	46.514	ENSOGAG00000001466	POP1	100	46.609	Otolemur_garnettii
ENSCVAG00000022248	pop1	100	46.851	ENSPPAG00000018410	POP1	100	47.092	Pan_paniscus
ENSCVAG00000022248	pop1	100	46.845	ENSPPRG00000005002	POP1	100	46.845	Panthera_pardus
ENSCVAG00000022248	pop1	100	47.188	ENSPTIG00000016527	POP1	100	47.188	Panthera_tigris_altaica
ENSCVAG00000022248	pop1	100	47.188	ENSPTRG00000020458	POP1	100	47.429	Pan_troglodytes
ENSCVAG00000022248	pop1	100	47.198	ENSPANG00000009704	POP1	100	47.009	Papio_anubis
ENSCVAG00000022248	pop1	100	57.490	ENSPKIG00000016325	POP1	100	57.490	Paramormyrops_kingsleyae
ENSCVAG00000022248	pop1	100	48.508	ENSPSIG00000012343	POP1	100	48.610	Pelodiscus_sinensis
ENSCVAG00000022248	pop1	100	60.197	ENSPMGG00000022253	POP1	100	60.477	Periophthalmus_magnuspinnatus
ENSCVAG00000022248	pop1	99	45.599	ENSPEMG00000023633	Pop1	100	45.599	Peromyscus_maniculatus_bairdii
ENSCVAG00000022248	pop1	91	42.918	ENSPMAG00000003209	POP1	99	42.587	Petromyzon_marinus
ENSCVAG00000022248	pop1	100	46.673	ENSPCIG00000012216	POP1	100	46.578	Phascolarctos_cinereus
ENSCVAG00000022248	pop1	100	78.074	ENSPFOG00000012490	POP1	100	78.074	Poecilia_formosa
ENSCVAG00000022248	pop1	100	77.744	ENSPLAG00000004646	POP1	100	77.744	Poecilia_latipinna
ENSCVAG00000022248	pop1	100	78.029	ENSPMEG00000019592	POP1	100	78.029	Poecilia_mexicana
ENSCVAG00000022248	pop1	100	78.221	ENSPREG00000020951	POP1	100	78.221	Poecilia_reticulata
ENSCVAG00000022248	pop1	100	47.293	ENSPPYG00000018777	POP1	100	47.293	Pongo_abelii
ENSCVAG00000022248	pop1	100	45.933	ENSPCAG00000016662	POP1	100	45.933	Procavia_capensis
ENSCVAG00000022248	pop1	100	46.591	ENSPCOG00000019420	POP1	100	47.053	Propithecus_coquereli
ENSCVAG00000022248	pop1	100	46.917	ENSPVAG00000014468	POP1	100	47.404	Pteropus_vampyrus
ENSCVAG00000022248	pop1	100	67.040	ENSPNYG00000004476	pop1	100	67.449	Pundamilia_nyererei
ENSCVAG00000022248	pop1	100	56.637	ENSPNAG00000000265	pop1	100	56.342	Pygocentrus_nattereri
ENSCVAG00000022248	pop1	100	45.341	ENSRNOG00000005243	Pop1	100	45.341	Rattus_norvegicus
ENSCVAG00000022248	pop1	100	47.628	ENSRBIG00000007996	POP1	100	47.628	Rhinopithecus_bieti
ENSCVAG00000022248	pop1	100	47.533	ENSRROG00000012334	POP1	100	47.533	Rhinopithecus_roxellana
ENSCVAG00000022248	pop1	99	46.532	ENSSBOG00000020830	POP1	100	46.679	Saimiri_boliviensis_boliviensis
ENSCVAG00000022248	pop1	100	46.445	ENSSHAG00000000296	POP1	100	46.445	Sarcophilus_harrisii
ENSCVAG00000022248	pop1	100	58.316	ENSSFOG00015007429	pop1	99	57.825	Scleropages_formosus
ENSCVAG00000022248	pop1	100	67.828	ENSSMAG00000010467	POP1	100	68.168	Scophthalmus_maximus
ENSCVAG00000022248	pop1	100	71.315	ENSSDUG00000007817	POP1	100	72.764	Seriola_dumerili
ENSCVAG00000022248	pop1	100	71.785	ENSSLDG00000012565	POP1	100	73.011	Seriola_lalandi_dorsalis
ENSCVAG00000022248	pop1	100	46.442	ENSSPUG00000003550	-	100	46.442	Sphenodon_punctatus
ENSCVAG00000022248	pop1	100	70.493	ENSSPAG00000014955	pop1	100	69.889	Stegastes_partitus
ENSCVAG00000022248	pop1	100	47.876	ENSSSCG00000006078	POP1	100	47.973	Sus_scrofa
ENSCVAG00000022248	pop1	94	44.641	ENSTGUG00000012011	-	100	44.548	Taeniopygia_guttata
ENSCVAG00000022248	pop1	100	66.531	ENSTRUG00000010856	pop1	100	65.856	Takifugu_rubripes
ENSCVAG00000022248	pop1	95	66.839	ENSTNIG00000013297	pop1	100	66.839	Tetraodon_nigroviridis
ENSCVAG00000022248	pop1	94	45.932	ENSTBEG00000014214	POP1	96	45.932	Tupaia_belangeri
ENSCVAG00000022248	pop1	100	46.227	ENSTTRG00000016071	POP1	100	46.139	Tursiops_truncatus
ENSCVAG00000022248	pop1	99	48.614	ENSUAMG00000017309	POP1	100	48.416	Ursus_americanus
ENSCVAG00000022248	pop1	100	47.204	ENSUMAG00000016952	POP1	100	51.698	Ursus_maritimus
ENSCVAG00000022248	pop1	85	53.791	ENSVPAG00000008278	POP1	80	53.791	Vicugna_pacos
ENSCVAG00000022248	pop1	100	47.505	ENSVVUG00000010994	POP1	100	47.313	Vulpes_vulpes
ENSCVAG00000022248	pop1	100	68.453	ENSXCOG00000017043	POP1	100	68.251	Xiphophorus_couchianus
ENSCVAG00000022248	pop1	100	77.357	ENSXMAG00000002472	POP1	100	77.357	Xiphophorus_maculatus