EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCVAG00000022349 (Gene tree)
Gene ID: 107098057
Gene Symbol: ythdc1
Alias: zgc:101592
Full Name: YTH domain containing 1
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Minus strand
Length: 16667 bases
Position: chrKL653243.1:280489-297155
Accession: 107098057
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000019018	YTH	PF04146.15	1.7e-40	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000032965	-	2766	XM_015395493	ENSCVAP00000019018	676 (aa)	XP_015250979	UPI0007428DB1

Gene Model

Click here to download ENSCVAG00000022349's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000022349's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000022349	ythdc1	59	65.783	ENSG00000083896	YTHDC1	57	59.424	Homo_sapiens
ENSCVAG00000022349	ythdc1	83	78.369	ENSAPOG00000013997	ythdc1	93	70.736	Acanthochromis_polyacanthus
ENSCVAG00000022349	ythdc1	59	66.055	ENSAMEG00000005688	YTHDC1	57	60.089	Ailuropoda_melanoleuca
ENSCVAG00000022349	ythdc1	60	76.399	ENSACIG00000019728	ythdc1	63	76.471	Amphilophus_citrinellus
ENSCVAG00000022349	ythdc1	94	81.875	ENSAOCG00000000239	ythdc1	94	81.064	Amphiprion_ocellaris
ENSCVAG00000022349	ythdc1	83	82.332	ENSAPEG00000000618	ythdc1	89	79.929	Amphiprion_percula
ENSCVAG00000022349	ythdc1	89	76.119	ENSATEG00000023007	ythdc1	54	89.790	Anabas_testudineus
ENSCVAG00000022349	ythdc1	92	54.332	ENSAPLG00000009921	YTHDC1	60	59.645	Anas_platyrhynchos
ENSCVAG00000022349	ythdc1	94	53.913	ENSACAG00000009697	YTHDC1	58	58.093	Anolis_carolinensis
ENSCVAG00000022349	ythdc1	59	65.783	ENSANAG00000001522	YTHDC1	57	59.424	Aotus_nancymaae
ENSCVAG00000022349	ythdc1	94	82.031	ENSACLG00000019371	ythdc1	94	80.751	Astatotilapia_calliptera
ENSCVAG00000022349	ythdc1	94	61.468	ENSAMXG00000006978	ythdc1	58	68.310	Astyanax_mexicanus
ENSCVAG00000022349	ythdc1	59	65.138	ENSBTAG00000015572	YTHDC1	57	59.202	Bos_taurus
ENSCVAG00000022349	ythdc1	59	65.783	ENSCJAG00000009934	YTHDC1	57	59.424	Callithrix_jacchus
ENSCVAG00000022349	ythdc1	59	66.055	ENSCAFG00000002821	YTHDC1	57	60.089	Canis_familiaris
ENSCVAG00000022349	ythdc1	59	66.055	ENSCAFG00020027112	YTHDC1	57	60.089	Canis_lupus_dingo
ENSCVAG00000022349	ythdc1	59	59.903	ENSCHIG00000004810	YTHDC1	50	67.153	Capra_hircus
ENSCVAG00000022349	ythdc1	59	65.783	ENSTSYG00000011668	YTHDC1	57	59.424	Carlito_syrichta
ENSCVAG00000022349	ythdc1	59	57.971	ENSCPOG00000010929	YTHDC1	53	54.831	Cavia_porcellus
ENSCVAG00000022349	ythdc1	59	65.783	ENSCCAG00000035754	YTHDC1	57	59.424	Cebus_capucinus
ENSCVAG00000022349	ythdc1	59	65.783	ENSCATG00000036320	YTHDC1	51	67.518	Cercocebus_atys
ENSCVAG00000022349	ythdc1	92	53.143	ENSCLAG00000005482	YTHDC1	56	60.952	Chinchilla_lanigera
ENSCVAG00000022349	ythdc1	59	65.367	ENSCSAG00000005252	YTHDC1	57	59.424	Chlorocebus_sabaeus
ENSCVAG00000022349	ythdc1	93	57.757	ENSCPBG00000021965	YTHDC1	62	59.424	Chrysemys_picta_bellii
ENSCVAG00000022349	ythdc1	59	65.783	ENSCANG00000004769	YTHDC1	50	67.518	Colobus_angolensis_palliatus
ENSCVAG00000022349	ythdc1	94	53.792	ENSCGRG00001000816	Ythdc1	56	60.093	Cricetulus_griseus_chok1gshd
ENSCVAG00000022349	ythdc1	92	54.101	ENSCGRG00000009807	Ythdc1	57	59.202	Cricetulus_griseus_crigri
ENSCVAG00000022349	ythdc1	94	79.751	ENSCSEG00000020404	ythdc1	59	90.099	Cynoglossus_semilaevis
ENSCVAG00000022349	ythdc1	94	60.154	ENSDARG00000051953	ythdc1	58	66.901	Danio_rerio
ENSCVAG00000022349	ythdc1	94	54.196	ENSDNOG00000004949	YTHDC1	57	59.424	Dasypus_novemcinctus
ENSCVAG00000022349	ythdc1	59	65.783	ENSDORG00000013045	Ythdc1	58	59.424	Dipodomys_ordii
ENSCVAG00000022349	ythdc1	62	38.037	ENSEBUG00000013696	ythdc1	63	39.286	Eptatretus_burgeri
ENSCVAG00000022349	ythdc1	59	66.055	ENSEASG00005018383	YTHDC1	61	60.089	Equus_asinus_asinus
ENSCVAG00000022349	ythdc1	73	70.079	ENSECAG00000018303	YTHDC1	61	60.089	Equus_caballus
ENSCVAG00000022349	ythdc1	59	65.596	ENSEEUG00000015466	YTHDC1	57	60.227	Erinaceus_europaeus
ENSCVAG00000022349	ythdc1	94	59.733	ENSELUG00000014029	ythdc1	52	72.334	Esox_lucius
ENSCVAG00000022349	ythdc1	59	66.506	ENSFCAG00000026791	YTHDC1	57	60.089	Felis_catus
ENSCVAG00000022349	ythdc1	74	62.084	ENSFALG00000006581	YTHDC1	81	65.591	Ficedula_albicollis
ENSCVAG00000022349	ythdc1	59	65.301	ENSFDAG00000018560	YTHDC1	58	60.000	Fukomys_damarensis
ENSCVAG00000022349	ythdc1	78	67.669	ENSFHEG00000001286	ythdc1	66	80.620	Fundulus_heteroclitus
ENSCVAG00000022349	ythdc1	92	54.079	ENSGALG00000035906	YTHDC1	54	60.698	Gallus_gallus
ENSCVAG00000022349	ythdc1	70	69.854	ENSGAFG00000001759	ythdc1	54	91.093	Gambusia_affinis
ENSCVAG00000022349	ythdc1	94	67.143	ENSGACG00000015486	ythdc1	57	70.805	Gasterosteus_aculeatus
ENSCVAG00000022349	ythdc1	93	57.078	ENSGAGG00000007108	YTHDC1	57	64.692	Gopherus_agassizii
ENSCVAG00000022349	ythdc1	59	65.783	ENSGGOG00000021958	YTHDC1	50	67.518	Gorilla_gorilla
ENSCVAG00000022349	ythdc1	94	82.188	ENSHBUG00000019288	ythdc1	94	80.908	Haplochromis_burtoni
ENSCVAG00000022349	ythdc1	60	51.030	ENSHGLG00000003239	-	56	48.182	Heterocephalus_glaber_female
ENSCVAG00000022349	ythdc1	59	65.301	ENSHGLG00000006319	-	56	60.952	Heterocephalus_glaber_female
ENSCVAG00000022349	ythdc1	59	63.962	ENSHGLG00100001556	-	58	57.812	Heterocephalus_glaber_male
ENSCVAG00000022349	ythdc1	60	48.864	ENSHGLG00100008060	-	57	46.050	Heterocephalus_glaber_male
ENSCVAG00000022349	ythdc1	70	78.205	ENSHCOG00000001520	ythdc1	88	80.460	Hippocampus_comes
ENSCVAG00000022349	ythdc1	94	60.648	ENSIPUG00000018136	ythdc1	58	66.509	Ictalurus_punctatus
ENSCVAG00000022349	ythdc1	59	64.539	ENSSTOG00000013652	YTHDC1	57	58.388	Ictidomys_tridecemlineatus
ENSCVAG00000022349	ythdc1	59	65.542	ENSJJAG00000010268	Ythdc1	57	60.789	Jaculus_jaculus
ENSCVAG00000022349	ythdc1	60	84.915	ENSKMAG00000006483	ythdc1	86	88.321	Kryptolebias_marmoratus
ENSCVAG00000022349	ythdc1	66	95.556	ENSLBEG00000020831	ythdc1	73	97.727	Labrus_bergylta
ENSCVAG00000022349	ythdc1	59	62.955	ENSLACG00000004893	YTHDC1	61	61.086	Latimeria_chalumnae
ENSCVAG00000022349	ythdc1	94	56.330	ENSLOCG00000003045	ythdc1	63	61.454	Lepisosteus_oculatus
ENSCVAG00000022349	ythdc1	80	53.333	ENSLAFG00000021592	YTHDC1	65	65.928	Loxodonta_africana
ENSCVAG00000022349	ythdc1	59	65.783	ENSMFAG00000031927	YTHDC1	50	67.518	Macaca_fascicularis
ENSCVAG00000022349	ythdc1	59	65.783	ENSMMUG00000002265	YTHDC1	57	59.424	Macaca_mulatta
ENSCVAG00000022349	ythdc1	59	65.783	ENSMNEG00000033751	YTHDC1	50	67.518	Macaca_nemestrina
ENSCVAG00000022349	ythdc1	59	65.783	ENSMLEG00000042147	YTHDC1	50	67.518	Mandrillus_leucophaeus
ENSCVAG00000022349	ythdc1	94	77.174	ENSMAMG00000013122	ythdc1	92	80.620	Mastacembelus_armatus
ENSCVAG00000022349	ythdc1	94	82.031	ENSMZEG00005023173	ythdc1	94	80.751	Maylandia_zebra
ENSCVAG00000022349	ythdc1	94	54.519	ENSMGAG00000010391	YTHDC1	59	59.424	Meleagris_gallopavo
ENSCVAG00000022349	ythdc1	94	53.652	ENSMAUG00000001286	Ythdc1	56	60.093	Mesocricetus_auratus
ENSCVAG00000022349	ythdc1	94	53.933	ENSMICG00000034640	YTHDC1	56	59.867	Microcebus_murinus
ENSCVAG00000022349	ythdc1	59	65.542	ENSMOCG00000020201	Ythdc1	58	58.170	Microtus_ochrogaster
ENSCVAG00000022349	ythdc1	51	48.509	ENSMODG00000004117	-	74	59.363	Monodelphis_domestica
ENSCVAG00000022349	ythdc1	94	55.882	ENSMODG00000020754	-	59	59.867	Monodelphis_domestica
ENSCVAG00000022349	ythdc1	70	50.324	ENSMODG00000014337	-	54	63.704	Monodelphis_domestica
ENSCVAG00000022349	ythdc1	64	45.342	ENSMODG00000009173	-	60	59.298	Monodelphis_domestica
ENSCVAG00000022349	ythdc1	84	80.105	ENSMALG00000013412	ythdc1	55	88.889	Monopterus_albus
ENSCVAG00000022349	ythdc1	59	65.542	MGP_CAROLIEiJ_G0027347	Ythdc1	57	59.202	Mus_caroli
ENSCVAG00000022349	ythdc1	94	54.119	ENSMUSG00000035851	Ythdc1	57	59.202	Mus_musculus
ENSCVAG00000022349	ythdc1	94	54.261	MGP_PahariEiJ_G0017126	Ythdc1	57	59.202	Mus_pahari
ENSCVAG00000022349	ythdc1	94	54.261	MGP_SPRETEiJ_G0028339	Ythdc1	57	59.202	Mus_spretus
ENSCVAG00000022349	ythdc1	67	70.079	ENSMPUG00000001743	YTHDC1	57	65.625	Mustela_putorius_furo
ENSCVAG00000022349	ythdc1	59	65.826	ENSMLUG00000016300	YTHDC1	58	59.867	Myotis_lucifugus
ENSCVAG00000022349	ythdc1	60	81.553	ENSNBRG00000007663	ythdc1	87	74.463	Neolamprologus_brichardi
ENSCVAG00000022349	ythdc1	59	63.288	ENSNLEG00000009202	YTHDC1	50	66.058	Nomascus_leucogenys
ENSCVAG00000022349	ythdc1	59	64.819	ENSODEG00000001715	YTHDC1	57	60.000	Octodon_degus
ENSCVAG00000022349	ythdc1	94	97.727	ENSONIG00000012651	ythdc1	94	81.221	Oreochromis_niloticus
ENSCVAG00000022349	ythdc1	94	51.348	ENSOCUG00000015886	YTHDC1	58	64.491	Oryctolagus_cuniculus
ENSCVAG00000022349	ythdc1	94	77.865	ENSORLG00000030544	ythdc1	95	77.900	Oryzias_latipes
ENSCVAG00000022349	ythdc1	94	78.807	ENSORLG00020019316	ythdc1	95	78.527	Oryzias_latipes_hni
ENSCVAG00000022349	ythdc1	94	75.078	ENSOMEG00000000551	ythdc1	95	73.717	Oryzias_melastigma
ENSCVAG00000022349	ythdc1	59	65.138	ENSOARG00000008633	YTHDC1	57	59.202	Ovis_aries
ENSCVAG00000022349	ythdc1	59	65.783	ENSPPAG00000041315	YTHDC1	51	67.518	Pan_paniscus
ENSCVAG00000022349	ythdc1	59	66.506	ENSPPRG00000011979	YTHDC1	56	61.021	Panthera_pardus
ENSCVAG00000022349	ythdc1	59	66.024	ENSPTIG00000015527	YTHDC1	58	58.606	Panthera_tigris_altaica
ENSCVAG00000022349	ythdc1	59	65.783	ENSPTRG00000016105	YTHDC1	51	67.518	Pan_troglodytes
ENSCVAG00000022349	ythdc1	59	65.783	ENSPANG00000021590	YTHDC1	50	67.518	Papio_anubis
ENSCVAG00000022349	ythdc1	94	58.106	ENSPKIG00000018497	ythdc1	76	62.358	Paramormyrops_kingsleyae
ENSCVAG00000022349	ythdc1	92	55.147	ENSPSIG00000002782	YTHDC1	60	59.424	Pelodiscus_sinensis
ENSCVAG00000022349	ythdc1	58	70.997	ENSPMGG00000000970	-	77	71.739	Periophthalmus_magnuspinnatus
ENSCVAG00000022349	ythdc1	59	65.542	ENSPEMG00000013850	Ythdc1	58	59.202	Peromyscus_maniculatus_bairdii
ENSCVAG00000022349	ythdc1	94	55.735	ENSPCIG00000006870	YTHDC1	59	59.867	Phascolarctos_cinereus
ENSCVAG00000022349	ythdc1	59	93.052	ENSPFOG00000013404	ythdc1	61	93.300	Poecilia_formosa
ENSCVAG00000022349	ythdc1	59	93.052	ENSPLAG00000011079	ythdc1	86	93.300	Poecilia_latipinna
ENSCVAG00000022349	ythdc1	59	93.052	ENSPMEG00000009238	ythdc1	61	93.300	Poecilia_mexicana
ENSCVAG00000022349	ythdc1	94	67.919	ENSPREG00000016973	ythdc1	54	91.950	Poecilia_reticulata
ENSCVAG00000022349	ythdc1	59	65.367	ENSPPYG00000014726	YTHDC1	70	57.917	Pongo_abelii
ENSCVAG00000022349	ythdc1	94	51.603	ENSPCOG00000019105	YTHDC1	55	56.813	Propithecus_coquereli
ENSCVAG00000022349	ythdc1	94	82.031	ENSPNYG00000011687	ythdc1	94	80.751	Pundamilia_nyererei
ENSCVAG00000022349	ythdc1	94	62.443	ENSPNAG00000028365	ythdc1	58	69.014	Pygocentrus_nattereri
ENSCVAG00000022349	ythdc1	59	63.964	ENSRNOG00000001996	Ythdc1	57	58.170	Rattus_norvegicus
ENSCVAG00000022349	ythdc1	59	64.480	ENSRBIG00000028279	YTHDC1	50	68.015	Rhinopithecus_bieti
ENSCVAG00000022349	ythdc1	59	65.783	ENSRROG00000035028	YTHDC1	50	67.518	Rhinopithecus_roxellana
ENSCVAG00000022349	ythdc1	59	65.783	ENSSBOG00000022353	YTHDC1	50	67.518	Saimiri_boliviensis_boliviensis
ENSCVAG00000022349	ythdc1	94	55.147	ENSSHAG00000002538	YTHDC1	65	59.867	Sarcophilus_harrisii
ENSCVAG00000022349	ythdc1	94	61.231	ENSSFOG00015003298	ythdc1	59	68.235	Scleropages_formosus
ENSCVAG00000022349	ythdc1	94	79.005	ENSSMAG00000009086	ythdc1	60	88.235	Scophthalmus_maximus
ENSCVAG00000022349	ythdc1	94	81.085	ENSSDUG00000022008	ythdc1	94	81.056	Seriola_dumerili
ENSCVAG00000022349	ythdc1	94	81.056	ENSSLDG00000007926	ythdc1	94	81.366	Seriola_lalandi_dorsalis
ENSCVAG00000022349	ythdc1	59	65.367	ENSSARG00000010960	YTHDC1	75	58.475	Sorex_araneus
ENSCVAG00000022349	ythdc1	94	54.573	ENSSPUG00000009357	YTHDC1	61	59.202	Sphenodon_punctatus
ENSCVAG00000022349	ythdc1	94	79.814	ENSSPAG00000011449	ythdc1	60	89.242	Stegastes_partitus
ENSCVAG00000022349	ythdc1	59	66.055	ENSSSCG00000035505	YTHDC1	61	59.041	Sus_scrofa
ENSCVAG00000022349	ythdc1	94	54.717	ENSTGUG00000004452	-	59	59.645	Taeniopygia_guttata
ENSCVAG00000022349	ythdc1	95	65.170	ENSTRUG00000010142	ythdc1	63	79.310	Takifugu_rubripes
ENSCVAG00000022349	ythdc1	96	70.213	ENSTNIG00000013243	ythdc1	85	83.704	Tetraodon_nigroviridis
ENSCVAG00000022349	ythdc1	59	64.908	ENSTTRG00000005083	YTHDC1	57	58.980	Tursiops_truncatus
ENSCVAG00000022349	ythdc1	59	66.506	ENSUAMG00000010388	YTHDC1	61	60.089	Ursus_americanus
ENSCVAG00000022349	ythdc1	92	50.530	ENSUMAG00000013668	YTHDC1	61	51.860	Ursus_maritimus
ENSCVAG00000022349	ythdc1	94	53.734	ENSVPAG00000009040	YTHDC1	56	60.325	Vicugna_pacos
ENSCVAG00000022349	ythdc1	59	66.055	ENSVVUG00000005387	YTHDC1	61	60.089	Vulpes_vulpes
ENSCVAG00000022349	ythdc1	94	56.815	ENSXETG00000017960	ythdc1	57	65.083	Xenopus_tropicalis
ENSCVAG00000022349	ythdc1	52	75.238	ENSXCOG00000000530	ythdc1	85	72.642	Xiphophorus_couchianus
ENSCVAG00000022349	ythdc1	94	84.567	ENSXMAG00000005196	ythdc1	61	93.300	Xiphophorus_maculatus