EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSCVAG00000022354 (Gene tree)
Gene ID
107094116
Gene Symbol
rbms3
Alias
zgc:153698
Full Name
RNA-binding motif%2C single-stranded-interacting protein 3-like
Gene Type
protein_coding
Species
Cyprinodon_variegatus
Status
putative
Strand
Plus strand
Length
163696 bases
Position
chrKL652964.1:372318-536013
Accession
107094116
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSCVAP00000032369RRM_1PF00076.224.4e-3212
ENSCVAP00000032369RRM_1PF00076.224.4e-3222
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSCVAT00000028104-4491XM_015389536ENSCVAP00000032369421 (aa)XP_015245022UPI00074275F0
Gene Model
Click here to download ENSCVAG00000022354's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000022354's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSCVAG00000022354rbms39463.235ENSCVAG00000013006rbms2b9366.667
ENSCVAG00000022354rbms38770.924ENSCVAG00000001635rbms2a7783.402
ENSCVAG00000022354rbms37662.154ENSCVAG00000014698rbms1a8461.846
ENSCVAG00000022354rbms39981.190ENSCVAG00000022814-9983.333
ENSCVAG00000022354rbms39267.758ENSCVAG00000002027RBMS19568.449
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSCVAG00000022354rbms310080.660ENSG00000144642RBMS310085.227Homo_sapiens
ENSCVAG00000022354rbms310089.301ENSAPOG00000007266rbms39396.615Acanthochromis_polyacanthus
ENSCVAG00000022354rbms39983.810ENSAPOG00000003432-9983.810Acanthochromis_polyacanthus
ENSCVAG00000022354rbms36975.738ENSAMEG00000005947RBMS310075.738Ailuropoda_melanoleuca
ENSCVAG00000022354rbms37287.417ENSACIG00000006987-8187.960Amphilophus_citrinellus
ENSCVAG00000022354rbms38783.967ENSACIG00000021113RBMS39684.553Amphilophus_citrinellus
ENSCVAG00000022354rbms310095.316ENSAOCG00000021274rbms310095.316Amphiprion_ocellaris
ENSCVAG00000022354rbms39977.449ENSAOCG00000024104-9977.221Amphiprion_ocellaris
ENSCVAG00000022354rbms38296.011ENSAPEG00000016299rbms39396.011Amphiprion_percula
ENSCVAG00000022354rbms39977.088ENSAPEG00000009481-9977.088Amphiprion_percula
ENSCVAG00000022354rbms39983.810ENSATEG00000008433-9983.810Anabas_testudineus
ENSCVAG00000022354rbms310095.059ENSATEG00000024295rbms310092.706Anabas_testudineus
ENSCVAG00000022354rbms39979.215ENSAPLG00000012270RBMS310079.215Anas_platyrhynchos
ENSCVAG00000022354rbms310080.851ENSACAG00000028664RBMS39980.851Anolis_carolinensis
ENSCVAG00000022354rbms310078.261ENSANAG00000021899RBMS310077.803Aotus_nancymaae
ENSCVAG00000022354rbms39976.298ENSACLG00000008976-9476.072Astatotilapia_calliptera
ENSCVAG00000022354rbms310094.340ENSACLG00000018506rbms310092.925Astatotilapia_calliptera
ENSCVAG00000022354rbms310082.506ENSAMXG00000020388rbms310084.397Astyanax_mexicanus
ENSCVAG00000022354rbms36281.679ENSAMXG00000043770-10081.298Astyanax_mexicanus
ENSCVAG00000022354rbms310080.896ENSBTAG00000044062RBMS310080.425Bos_taurus
ENSCVAG00000022354rbms310078.261ENSCJAG00000004312RBMS310077.803Callithrix_jacchus
ENSCVAG00000022354rbms310078.082ENSCAFG00000005464RBMS39977.626Canis_familiaris
ENSCVAG00000022354rbms310078.082ENSCAFG00020024980RBMS310077.626Canis_lupus_dingo
ENSCVAG00000022354rbms310080.425ENSCHIG00000009144RBMS39979.953Capra_hircus
ENSCVAG00000022354rbms37677.844ENSTSYG00000002615RBMS310077.844Carlito_syrichta
ENSCVAG00000022354rbms38778.747ENSCAPG00000017783RBMS39378.747Cavia_aperea
ENSCVAG00000022354rbms310081.560ENSCPOG00000006457RBMS39981.560Cavia_porcellus
ENSCVAG00000022354rbms310078.261ENSCCAG00000008671RBMS310077.803Cebus_capucinus
ENSCVAG00000022354rbms310078.032ENSCATG00000013222RBMS310077.574Cercocebus_atys
ENSCVAG00000022354rbms310080.896ENSCLAG00000005866RBMS39980.425Chinchilla_lanigera
ENSCVAG00000022354rbms36578.102ENSCSAG00000009655RBMS39978.102Chlorocebus_sabaeus
ENSCVAG00000022354rbms38684.000ENSCHOG00000000758RBMS38178.592Choloepus_hoffmanni
ENSCVAG00000022354rbms310081.324ENSCPBG00000022678RBMS39882.895Chrysemys_picta_bellii
ENSCVAG00000022354rbms310078.261ENSCANG00000032137RBMS310077.803Colobus_angolensis_palliatus
ENSCVAG00000022354rbms310077.541ENSCGRG00001007243Rbms39978.723Cricetulus_griseus_chok1gshd
ENSCVAG00000022354rbms310077.541ENSCGRG00000004599Rbms39978.723Cricetulus_griseus_crigri
ENSCVAG00000022354rbms310083.452ENSCSEG00000014677-9488.664Cynoglossus_semilaevis
ENSCVAG00000022354rbms310092.958ENSCSEG00000010011RBMS310090.845Cynoglossus_semilaevis
ENSCVAG00000022354rbms310085.071ENSDARG00000044574rbms39295.506Danio_rerio
ENSCVAG00000022354rbms310079.717ENSDNOG00000016645RBMS39779.245Dasypus_novemcinctus
ENSCVAG00000022354rbms310080.189ENSDORG00000007220Rbms39979.717Dipodomys_ordii
ENSCVAG00000022354rbms38064.972ENSETEG00000009485-8164.972Echinops_telfairi
ENSCVAG00000022354rbms36156.154ENSEBUG00000005830rbms38356.154Eptatretus_burgeri
ENSCVAG00000022354rbms310080.425ENSEASG00005006152RBMS39979.953Equus_asinus_asinus
ENSCVAG00000022354rbms310080.425ENSECAG00000017871RBMS39979.953Equus_caballus
ENSCVAG00000022354rbms39071.899ENSEEUG00000014337RBMS310071.392Erinaceus_europaeus
ENSCVAG00000022354rbms310080.986ENSELUG00000002862rbms310080.751Esox_lucius
ENSCVAG00000022354rbms39085.526ENSELUG00000006905-9888.259Esox_lucius
ENSCVAG00000022354rbms310080.189ENSFCAG00000002130RBMS39979.717Felis_catus
ENSCVAG00000022354rbms310081.324ENSFALG00000009165RBMS39981.324Ficedula_albicollis
ENSCVAG00000022354rbms310080.425ENSFDAG00000008278RBMS39979.953Fukomys_damarensis
ENSCVAG00000022354rbms39978.998ENSFHEG00000004787RBMS39588.076Fundulus_heteroclitus
ENSCVAG00000022354rbms38778.061ENSGMOG00000002600-9378.149Gadus_morhua
ENSCVAG00000022354rbms310081.324ENSGALG00000011439RBMS39981.324Gallus_gallus
ENSCVAG00000022354rbms39984.048ENSGAFG00000003329-9983.571Gambusia_affinis
ENSCVAG00000022354rbms310098.104ENSGAFG00000000168rbms310098.104Gambusia_affinis
ENSCVAG00000022354rbms36578.182ENSGAGG00000004039RBMS310078.182Gopherus_agassizii
ENSCVAG00000022354rbms310078.261ENSGGOG00000007228RBMS310077.803Gorilla_gorilla
ENSCVAG00000022354rbms36395.167ENSHBUG00000021196rbms39495.167Haplochromis_burtoni
ENSCVAG00000022354rbms310079.773ENSHBUG00000019785-9679.545Haplochromis_burtoni
ENSCVAG00000022354rbms310080.425ENSHGLG00000002170RBMS39979.953Heterocephalus_glaber_female
ENSCVAG00000022354rbms310080.425ENSHGLG00100014278RBMS39979.953Heterocephalus_glaber_male
ENSCVAG00000022354rbms39982.185ENSHCOG00000007894-9982.185Hippocampus_comes
ENSCVAG00000022354rbms310082.979ENSIPUG00000017680rbms310084.870Ictalurus_punctatus
ENSCVAG00000022354rbms310080.751ENSSTOG00000006324RBMS39980.189Ictidomys_tridecemlineatus
ENSCVAG00000022354rbms310077.594ENSJJAG00000014708Rbms39977.123Jaculus_jaculus
ENSCVAG00000022354rbms39983.571ENSKMAG00000012586-9983.571Kryptolebias_marmoratus
ENSCVAG00000022354rbms310095.105ENSKMAG00000020500rbms310095.105Kryptolebias_marmoratus
ENSCVAG00000022354rbms39983.055ENSLBEG00000027388-9983.532Labrus_bergylta
ENSCVAG00000022354rbms36084.411ENSLBEG00000006677rbms39784.411Labrus_bergylta
ENSCVAG00000022354rbms310082.270ENSLACG00000010581RBMS310082.506Latimeria_chalumnae
ENSCVAG00000022354rbms36982.653ENSLOCG00000002328rbms310082.653Lepisosteus_oculatus
ENSCVAG00000022354rbms310078.082ENSLAFG00000000354RBMS310077.626Loxodonta_africana
ENSCVAG00000022354rbms310080.660ENSMFAG00000033300RBMS39980.189Macaca_fascicularis
ENSCVAG00000022354rbms310080.660ENSMMUG00000004404RBMS39980.189Macaca_mulatta
ENSCVAG00000022354rbms310078.261ENSMNEG00000035839RBMS310077.803Macaca_nemestrina
ENSCVAG00000022354rbms310078.032ENSMLEG00000029464RBMS310077.574Mandrillus_leucophaeus
ENSCVAG00000022354rbms310094.366ENSMAMG00000024043rbms310091.549Mastacembelus_armatus
ENSCVAG00000022354rbms39086.053ENSMAMG00000002176-8386.053Mastacembelus_armatus
ENSCVAG00000022354rbms310094.340ENSMZEG00005006308rbms310092.925Maylandia_zebra
ENSCVAG00000022354rbms310080.645ENSMZEG00005026469-9680.645Maylandia_zebra
ENSCVAG00000022354rbms310077.541ENSMAUG00000016436Rbms39978.723Mesocricetus_auratus
ENSCVAG00000022354rbms310078.311ENSMICG00000049249RBMS310077.803Microcebus_murinus
ENSCVAG00000022354rbms310077.069ENSMOCG00000006997Rbms39978.251Microtus_ochrogaster
ENSCVAG00000022354rbms39983.294ENSMMOG00000015071-9983.294Mola_mola
ENSCVAG00000022354rbms38295.989ENSMMOG00000008471RBMS39595.989Mola_mola
ENSCVAG00000022354rbms310072.768ENSMODG00000015125RBMS39973.333Monodelphis_domestica
ENSCVAG00000022354rbms39984.286ENSMALG00000009155-9984.286Monopterus_albus
ENSCVAG00000022354rbms310094.131ENSMALG00000019536RBMS310092.019Monopterus_albus
ENSCVAG00000022354rbms310077.069MGP_CAROLIEiJ_G0032783Rbms39978.251Mus_caroli
ENSCVAG00000022354rbms310077.541ENSMUSG00000039607Rbms39986.190Mus_musculus
ENSCVAG00000022354rbms310077.358MGP_PahariEiJ_G0015650Rbms39986.190Mus_pahari
ENSCVAG00000022354rbms310077.541MGP_SPRETEiJ_G0033930Rbms39986.190Mus_spretus
ENSCVAG00000022354rbms310078.082ENSMPUG00000011956RBMS310077.626Mustela_putorius_furo
ENSCVAG00000022354rbms310080.660ENSMLUG00000000659RBMS310080.189Myotis_lucifugus
ENSCVAG00000022354rbms310080.378ENSNGAG00000014039Rbms39980.378Nannospalax_galili
ENSCVAG00000022354rbms39983.333ENSNBRG00000018065-9983.333Neolamprologus_brichardi
ENSCVAG00000022354rbms310078.261ENSNLEG00000004129RBMS310077.803Nomascus_leucogenys
ENSCVAG00000022354rbms39971.233ENSMEUG00000004772RBMS310071.233Notamacropus_eugenii
ENSCVAG00000022354rbms39978.261ENSOPRG00000006808RBMS38577.803Ochotona_princeps
ENSCVAG00000022354rbms310080.425ENSODEG00000003651RBMS39979.953Octodon_degus
ENSCVAG00000022354rbms310089.336ENSONIG00000007172rbms310089.100Oreochromis_niloticus
ENSCVAG00000022354rbms310078.995ENSOANG00000010529RBMS39978.539Ornithorhynchus_anatinus
ENSCVAG00000022354rbms310077.626ENSOCUG00000004840RBMS39977.169Oryctolagus_cuniculus
ENSCVAG00000022354rbms39983.810ENSORLG00000002306-9983.810Oryzias_latipes
ENSCVAG00000022354rbms310092.654ENSORLG00000005370RBMS310092.654Oryzias_latipes
ENSCVAG00000022354rbms39983.810ENSORLG00020008496-9983.810Oryzias_latipes_hni
ENSCVAG00000022354rbms310092.654ENSORLG00020022674RBMS310092.654Oryzias_latipes_hni
ENSCVAG00000022354rbms39983.810ENSORLG00015015719-9983.810Oryzias_latipes_hsok
ENSCVAG00000022354rbms310092.891ENSORLG00015005509rbms310092.891Oryzias_latipes_hsok
ENSCVAG00000022354rbms310093.365ENSOMEG00000014805RBMS310093.128Oryzias_melastigma
ENSCVAG00000022354rbms39182.902ENSOMEG00000007677-9585.246Oryzias_melastigma
ENSCVAG00000022354rbms310077.397ENSOARG00000014684RBMS39976.941Ovis_aries
ENSCVAG00000022354rbms310078.261ENSPPAG00000036519RBMS310077.803Pan_paniscus
ENSCVAG00000022354rbms310077.574ENSPPRG00000002761RBMS310077.117Panthera_pardus
ENSCVAG00000022354rbms310079.953ENSPTIG00000011568RBMS310079.481Panthera_tigris_altaica
ENSCVAG00000022354rbms310080.660ENSPTRG00000014709RBMS39980.189Pan_troglodytes
ENSCVAG00000022354rbms310078.032ENSPANG00000010234RBMS310077.574Papio_anubis
ENSCVAG00000022354rbms36286.641ENSPKIG00000007989-10086.641Paramormyrops_kingsleyae
ENSCVAG00000022354rbms310080.851ENSPSIG00000005269RBMS39980.851Pelodiscus_sinensis
ENSCVAG00000022354rbms39182.857ENSPMGG00000021683-9585.205Periophthalmus_magnuspinnatus
ENSCVAG00000022354rbms38293.372ENSPMGG00000021544rbms38594.190Periophthalmus_magnuspinnatus
ENSCVAG00000022354rbms39974.584ENSPEMG00000001117Rbms310075.772Peromyscus_maniculatus_bairdii
ENSCVAG00000022354rbms38383.239ENSPCIG00000006106RBMS38884.906Phascolarctos_cinereus
ENSCVAG00000022354rbms310098.578ENSPFOG00000017887rbms310098.578Poecilia_formosa
ENSCVAG00000022354rbms37695.963ENSPLAG00000016866-8395.963Poecilia_latipinna
ENSCVAG00000022354rbms39983.333ENSPMEG00000002993-9983.333Poecilia_mexicana
ENSCVAG00000022354rbms39998.329ENSPREG00000011880rbms39998.329Poecilia_reticulata
ENSCVAG00000022354rbms38784.824ENSPREG00000018221-9786.328Poecilia_reticulata
ENSCVAG00000022354rbms310065.982ENSPPYG00000014050RBMS38265.525Pongo_abelii
ENSCVAG00000022354rbms310058.581ENSPCAG00000006307RBMS39958.581Procavia_capensis
ENSCVAG00000022354rbms310078.490ENSPCOG00000017136RBMS310078.032Propithecus_coquereli
ENSCVAG00000022354rbms38984.000ENSPVAG00000014037RBMS38378.846Pteropus_vampyrus
ENSCVAG00000022354rbms310094.104ENSPNYG00000010546rbms310092.689Pundamilia_nyererei
ENSCVAG00000022354rbms39983.333ENSPNYG00000012624-9983.333Pundamilia_nyererei
ENSCVAG00000022354rbms310082.742ENSPNAG00000001800rbms310084.634Pygocentrus_nattereri
ENSCVAG00000022354rbms310077.778ENSRNOG00000025881Rbms310078.960Rattus_norvegicus
ENSCVAG00000022354rbms310078.490ENSRBIG00000035863RBMS310078.032Rhinopithecus_bieti
ENSCVAG00000022354rbms38780.628ENSRROG00000027512RBMS39380.628Rhinopithecus_roxellana
ENSCVAG00000022354rbms310078.261ENSSBOG00000020232RBMS310077.803Saimiri_boliviensis_boliviensis
ENSCVAG00000022354rbms38776.965ENSSHAG00000002411RBMS39477.778Sarcophilus_harrisii
ENSCVAG00000022354rbms39983.732ENSSFOG00015008578rbms39983.732Scleropages_formosus
ENSCVAG00000022354rbms310090.398ENSSMAG00000004997rbms310092.935Scophthalmus_maximus
ENSCVAG00000022354rbms39085.526ENSSMAG00000020065-9385.526Scophthalmus_maximus
ENSCVAG00000022354rbms310095.540ENSSDUG00000013656RBMS310095.540Seriola_dumerili
ENSCVAG00000022354rbms39983.810ENSSDUG00000019287-9983.810Seriola_dumerili
ENSCVAG00000022354rbms310095.105ENSSLDG00000020276RBMS310095.105Seriola_lalandi_dorsalis
ENSCVAG00000022354rbms39983.810ENSSLDG00000013224-9983.810Seriola_lalandi_dorsalis
ENSCVAG00000022354rbms37768.235ENSSARG00000000695RBMS39268.235Sorex_araneus
ENSCVAG00000022354rbms37077.076ENSSPUG00000017197RBMS39877.076Sphenodon_punctatus
ENSCVAG00000022354rbms310095.785ENSSPAG00000020693rbms310095.785Stegastes_partitus
ENSCVAG00000022354rbms39976.082ENSSPAG00000003983-9976.082Stegastes_partitus
ENSCVAG00000022354rbms310080.425ENSSSCG00000036381RBMS39979.953Sus_scrofa
ENSCVAG00000022354rbms37678.209ENSTGUG00000003572RBMS310078.209Taeniopygia_guttata
ENSCVAG00000022354rbms310091.549ENSTRUG00000021719RBMS310089.202Takifugu_rubripes
ENSCVAG00000022354rbms39974.704ENSTRUG00000007482-9974.704Takifugu_rubripes
ENSCVAG00000022354rbms37781.176ENSTBEG00000005362RBMS39281.176Tupaia_belangeri
ENSCVAG00000022354rbms39977.574ENSTTRG00000006202RBMS310077.117Tursiops_truncatus
ENSCVAG00000022354rbms310078.082ENSUMAG00000000263RBMS39977.626Ursus_maritimus
ENSCVAG00000022354rbms38770.419ENSVPAG00000003842RBMS39270.419Vicugna_pacos
ENSCVAG00000022354rbms38780.157ENSVVUG00000004660RBMS39091.866Vulpes_vulpes
ENSCVAG00000022354rbms37073.463ENSXETG00000032055RBMS39973.463Xenopus_tropicalis
ENSCVAG00000022354rbms39168.367ENSXCOG00000019600-9569.624Xiphophorus_couchianus
ENSCVAG00000022354rbms310097.872ENSXMAG00000021783rbms310097.872Xiphophorus_maculatus
ENSCVAG00000022354rbms39983.571ENSXMAG00000014382-9983.571Xiphophorus_maculatus

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