EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCVAG00000022404 (Gene tree)
Gene ID: 107088432
Gene Symbol: ddx54
Alias: chunp6913|mgc2835
Full Name: DEAD-box helicase 54
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Minus strand
Length: 10682 bases
Position: chrKL652718.1:333860-344541
Accession: 107088432
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000032375	DBP10CT	PF08147.12	3.4e-18	1	1
ENSCVAP00000019047	DBP10CT	PF08147.12	3.7e-18	1	1
ENSCVAP00000019047	DEAD	PF00270.29	2.9e-51	1	1
ENSCVAP00000032375	DEAD	PF00270.29	2.2e-43	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000028144	-	3024	XM_015380597	ENSCVAP00000019047	859 (aa)	XP_015236083	UPI0007429560
ENSCVAT00000028113	-	2493	-	ENSCVAP00000032375	830 (aa)	-	-

Gene Model

Click here to download ENSCVAG00000022404's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000022404's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCVAG00000022404	ddx54	51	34.009	ENSCVAG00000017936	ddx18	65	34.009

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000022404	ddx54	98	60.532	ENSG00000123064	DDX54	100	87.500	Homo_sapiens
ENSCVAG00000022404	ddx54	98	84.161	ENSAPOG00000008602	ddx54	100	84.339	Acanthochromis_polyacanthus
ENSCVAG00000022404	ddx54	98	60.347	ENSAMEG00000008775	DDX54	96	59.930	Ailuropoda_melanoleuca
ENSCVAG00000022404	ddx54	100	80.138	ENSACIG00000019104	ddx54	100	80.412	Amphilophus_citrinellus
ENSCVAG00000022404	ddx54	98	83.550	ENSAOCG00000008449	ddx54	100	84.339	Amphiprion_ocellaris
ENSCVAG00000022404	ddx54	98	83.550	ENSAPEG00000014287	ddx54	100	84.339	Amphiprion_percula
ENSCVAG00000022404	ddx54	100	81.503	ENSATEG00000018529	ddx54	100	82.197	Anabas_testudineus
ENSCVAG00000022404	ddx54	95	62.667	ENSAPLG00000013191	DDX54	100	63.382	Anas_platyrhynchos
ENSCVAG00000022404	ddx54	97	63.680	ENSACAG00000004703	DDX54	98	63.473	Anolis_carolinensis
ENSCVAG00000022404	ddx54	99	52.252	ENSANAG00000032761	-	96	51.945	Aotus_nancymaae
ENSCVAG00000022404	ddx54	90	54.442	ENSANAG00000032241	-	95	54.092	Aotus_nancymaae
ENSCVAG00000022404	ddx54	100	81.649	ENSACLG00000013176	ddx54	100	81.401	Astatotilapia_calliptera
ENSCVAG00000022404	ddx54	100	75.489	ENSAMXG00000009189	ddx54	100	75.433	Astyanax_mexicanus
ENSCVAG00000022404	ddx54	98	60.814	ENSBTAG00000011930	DDX54	91	60.694	Bos_taurus
ENSCVAG00000022404	ddx54	89	46.223	WBGene00022378	Y94H6A.5	96	45.742	Caenorhabditis_elegans
ENSCVAG00000022404	ddx54	87	62.794	ENSCJAG00000010039	DDX54	81	62.760	Callithrix_jacchus
ENSCVAG00000022404	ddx54	66	51.389	ENSCAFG00000009029	DDX54	99	51.483	Canis_familiaris
ENSCVAG00000022404	ddx54	98	60.677	ENSCAFG00020017643	DDX54	97	60.652	Canis_lupus_dingo
ENSCVAG00000022404	ddx54	98	59.328	ENSCHIG00000026798	DDX54	97	59.144	Capra_hircus
ENSCVAG00000022404	ddx54	95	57.706	ENSTSYG00000007898	DDX54	94	57.314	Carlito_syrichta
ENSCVAG00000022404	ddx54	95	61.529	ENSCAPG00000001482	DDX54	99	58.354	Cavia_aperea
ENSCVAG00000022404	ddx54	98	60.606	ENSCPOG00000020649	DDX54	97	60.069	Cavia_porcellus
ENSCVAG00000022404	ddx54	98	60.277	ENSCCAG00000022625	DDX54	97	60.484	Cebus_capucinus
ENSCVAG00000022404	ddx54	98	60.347	ENSCATG00000041943	DDX54	97	60.323	Cercocebus_atys
ENSCVAG00000022404	ddx54	100	58.877	ENSCLAG00000010748	DDX54	98	58.851	Chinchilla_lanigera
ENSCVAG00000022404	ddx54	95	60.885	ENSCSAG00000002432	DDX54	90	60.906	Chlorocebus_sabaeus
ENSCVAG00000022404	ddx54	77	60.796	ENSCPBG00000017982	DDX54	85	60.337	Chrysemys_picta_bellii
ENSCVAG00000022404	ddx54	88	56.250	ENSCING00000004789	-	93	55.058	Ciona_intestinalis
ENSCVAG00000022404	ddx54	90	53.342	ENSCSAVG00000008916	-	98	70.783	Ciona_savignyi
ENSCVAG00000022404	ddx54	90	85.957	ENSCANG00000020637	DDX54	99	85.957	Colobus_angolensis_palliatus
ENSCVAG00000022404	ddx54	100	60.343	ENSCGRG00001014803	Ddx54	97	60.209	Cricetulus_griseus_chok1gshd
ENSCVAG00000022404	ddx54	100	60.205	ENSCGRG00000002827	Ddx54	97	60.069	Cricetulus_griseus_crigri
ENSCVAG00000022404	ddx54	98	78.706	ENSCSEG00000016462	ddx54	100	79.123	Cynoglossus_semilaevis
ENSCVAG00000022404	ddx54	100	73.750	ENSDARG00000105286	ddx54	100	74.856	Danio_rerio
ENSCVAG00000022404	ddx54	98	60.606	ENSDNOG00000032913	DDX54	97	60.581	Dasypus_novemcinctus
ENSCVAG00000022404	ddx54	78	56.681	ENSDORG00000003399	Ddx54	92	56.975	Dipodomys_ordii
ENSCVAG00000022404	ddx54	84	46.438	FBgn0052344	CG32344	89	46.499	Drosophila_melanogaster
ENSCVAG00000022404	ddx54	81	58.807	ENSEBUG00000008886	ddx54	97	59.334	Eptatretus_burgeri
ENSCVAG00000022404	ddx54	89	56.941	ENSEASG00005009501	DDX54	100	54.254	Equus_asinus_asinus
ENSCVAG00000022404	ddx54	90	69.818	ENSECAG00000012890	DDX54	98	66.556	Equus_caballus
ENSCVAG00000022404	ddx54	60	88.608	ENSEEUG00000008296	-	58	88.608	Erinaceus_europaeus
ENSCVAG00000022404	ddx54	100	75.459	ENSELUG00000013533	ddx54	100	76.844	Esox_lucius
ENSCVAG00000022404	ddx54	98	59.791	ENSFCAG00000027806	DDX54	97	59.977	Felis_catus
ENSCVAG00000022404	ddx54	93	64.160	ENSFALG00000007737	DDX54	100	64.035	Ficedula_albicollis
ENSCVAG00000022404	ddx54	88	75.638	ENSFDAG00000019953	DDX54	96	74.487	Fukomys_damarensis
ENSCVAG00000022404	ddx54	100	89.547	ENSFHEG00000018425	ddx54	100	89.057	Fundulus_heteroclitus
ENSCVAG00000022404	ddx54	96	73.855	ENSGMOG00000011746	ddx54	100	74.128	Gadus_morhua
ENSCVAG00000022404	ddx54	95	64.528	ENSGALG00000007490	DDX54	97	64.485	Gallus_gallus
ENSCVAG00000022404	ddx54	100	86.760	ENSGAFG00000010336	ddx54	100	86.760	Gambusia_affinis
ENSCVAG00000022404	ddx54	100	76.591	ENSGACG00000016793	ddx54	100	76.705	Gasterosteus_aculeatus
ENSCVAG00000022404	ddx54	95	64.885	ENSGAGG00000022803	DDX54	100	65.056	Gopherus_agassizii
ENSCVAG00000022404	ddx54	98	60.301	ENSGGOG00000010414	DDX54	97	59.885	Gorilla_gorilla
ENSCVAG00000022404	ddx54	98	60.117	ENSHGLG00000014411	DDX54	96	60.117	Heterocephalus_glaber_female
ENSCVAG00000022404	ddx54	98	60.187	ENSHGLG00100018511	DDX54	96	60.187	Heterocephalus_glaber_male
ENSCVAG00000022404	ddx54	100	78.679	ENSHCOG00000019287	ddx54	100	78.049	Hippocampus_comes
ENSCVAG00000022404	ddx54	100	75.145	ENSIPUG00000015556	Ddx54	100	76.097	Ictalurus_punctatus
ENSCVAG00000022404	ddx54	89	60.153	ENSSTOG00000004068	DDX54	100	60.000	Ictidomys_tridecemlineatus
ENSCVAG00000022404	ddx54	98	60.844	ENSJJAG00000015712	Ddx54	96	60.890	Jaculus_jaculus
ENSCVAG00000022404	ddx54	100	83.469	ENSKMAG00000017520	ddx54	100	83.353	Kryptolebias_marmoratus
ENSCVAG00000022404	ddx54	100	76.606	ENSLBEG00000019480	ddx54	100	76.835	Labrus_bergylta
ENSCVAG00000022404	ddx54	96	66.276	ENSLACG00000008944	DDX54	96	66.204	Latimeria_chalumnae
ENSCVAG00000022404	ddx54	100	72.549	ENSLOCG00000008485	ddx54	100	72.422	Lepisosteus_oculatus
ENSCVAG00000022404	ddx54	90	52.211	ENSLAFG00000027782	DDX54	100	51.970	Loxodonta_africana
ENSCVAG00000022404	ddx54	98	60.023	ENSMFAG00000043636	DDX54	97	60.484	Macaca_fascicularis
ENSCVAG00000022404	ddx54	98	59.791	ENSMMUG00000021795	DDX54	97	60.253	Macaca_mulatta
ENSCVAG00000022404	ddx54	98	54.745	ENSMNEG00000043605	DDX54	97	55.069	Macaca_nemestrina
ENSCVAG00000022404	ddx54	98	57.390	ENSMLEG00000038981	DDX54	97	57.373	Mandrillus_leucophaeus
ENSCVAG00000022404	ddx54	100	82.679	ENSMAMG00000012784	ddx54	100	83.141	Mastacembelus_armatus
ENSCVAG00000022404	ddx54	100	79.907	ENSMZEG00005018773	ddx54	100	79.679	Maylandia_zebra
ENSCVAG00000022404	ddx54	95	63.297	ENSMGAG00000009183	DDX54	100	63.418	Meleagris_gallopavo
ENSCVAG00000022404	ddx54	98	60.490	ENSMAUG00000011051	Ddx54	97	60.627	Mesocricetus_auratus
ENSCVAG00000022404	ddx54	100	59.840	ENSMICG00000012217	DDX54	98	60.046	Microcebus_murinus
ENSCVAG00000022404	ddx54	100	60.321	ENSMOCG00000010835	Ddx54	97	60.465	Microtus_ochrogaster
ENSCVAG00000022404	ddx54	98	81.280	ENSMMOG00000009634	ddx54	100	81.163	Mola_mola
ENSCVAG00000022404	ddx54	95	62.379	ENSMODG00000003413	DDX54	97	62.652	Monodelphis_domestica
ENSCVAG00000022404	ddx54	100	82.135	ENSMALG00000022098	ddx54	100	82.019	Monopterus_albus
ENSCVAG00000022404	ddx54	98	61.001	MGP_CAROLIEiJ_G0027665	Ddx54	97	61.092	Mus_caroli
ENSCVAG00000022404	ddx54	98	61.047	ENSMUSG00000029599	Ddx54	97	61.066	Mus_musculus
ENSCVAG00000022404	ddx54	98	60.814	MGP_PahariEiJ_G0024247	Ddx54	97	60.880	Mus_pahari
ENSCVAG00000022404	ddx54	98	60.950	MGP_SPRETEiJ_G0028665	Ddx54	97	60.855	Mus_spretus
ENSCVAG00000022404	ddx54	98	60.139	ENSMPUG00000002574	DDX54	97	59.977	Mustela_putorius_furo
ENSCVAG00000022404	ddx54	98	61.047	ENSNGAG00000021313	Ddx54	97	60.325	Nannospalax_galili
ENSCVAG00000022404	ddx54	68	93.842	ENSNBRG00000005588	ddx54	75	93.842	Neolamprologus_brichardi
ENSCVAG00000022404	ddx54	98	60.798	ENSNLEG00000000162	DDX54	96	61.144	Nomascus_leucogenys
ENSCVAG00000022404	ddx54	81	63.143	ENSMEUG00000015392	DDX54	97	63.783	Notamacropus_eugenii
ENSCVAG00000022404	ddx54	82	75.748	ENSOPRG00000012000	DDX54	80	75.748	Ochotona_princeps
ENSCVAG00000022404	ddx54	98	59.207	ENSODEG00000014863	DDX54	96	59.181	Octodon_degus
ENSCVAG00000022404	ddx54	98	58.980	ENSOCUG00000008932	DDX54	97	58.918	Oryctolagus_cuniculus
ENSCVAG00000022404	ddx54	100	79.675	ENSORLG00000007385	ddx54	100	80.649	Oryzias_latipes
ENSCVAG00000022404	ddx54	100	79.514	ENSORLG00020000858	ddx54	100	80.533	Oryzias_latipes_hni
ENSCVAG00000022404	ddx54	100	79.675	ENSORLG00015006956	ddx54	100	80.720	Oryzias_latipes_hsok
ENSCVAG00000022404	ddx54	98	80.425	ENSOMEG00000003663	ddx54	100	81.661	Oryzias_melastigma
ENSCVAG00000022404	ddx54	98	60.210	ENSOGAG00000004210	DDX54	98	60.616	Otolemur_garnettii
ENSCVAG00000022404	ddx54	98	59.884	ENSOARG00000008363	DDX54	97	59.722	Ovis_aries
ENSCVAG00000022404	ddx54	98	59.884	ENSPPAG00000042178	DDX54	98	59.977	Pan_paniscus
ENSCVAG00000022404	ddx54	98	57.621	ENSPPRG00000005223	DDX54	97	58.545	Panthera_pardus
ENSCVAG00000022404	ddx54	62	83.854	ENSPTIG00000019728	DDX54	82	83.854	Panthera_tigris_altaica
ENSCVAG00000022404	ddx54	98	59.977	ENSPTRG00000005483	DDX54	97	59.885	Pan_troglodytes
ENSCVAG00000022404	ddx54	98	60.023	ENSPANG00000008883	DDX54	97	60.323	Papio_anubis
ENSCVAG00000022404	ddx54	100	74.309	ENSPKIG00000018272	ddx54	98	74.078	Paramormyrops_kingsleyae
ENSCVAG00000022404	ddx54	54	77.706	ENSPSIG00000005055	DDX54	95	77.706	Pelodiscus_sinensis
ENSCVAG00000022404	ddx54	95	76.035	ENSPMGG00000010988	ddx54	99	75.970	Periophthalmus_magnuspinnatus
ENSCVAG00000022404	ddx54	100	60.367	ENSPEMG00000016701	Ddx54	97	60.511	Peromyscus_maniculatus_bairdii
ENSCVAG00000022404	ddx54	100	89.290	ENSPFOG00000019822	ddx54	100	89.290	Poecilia_formosa
ENSCVAG00000022404	ddx54	100	89.173	ENSPLAG00000004530	ddx54	100	89.173	Poecilia_latipinna
ENSCVAG00000022404	ddx54	100	89.057	ENSPMEG00000010803	ddx54	100	89.057	Poecilia_mexicana
ENSCVAG00000022404	ddx54	100	89.779	ENSPREG00000014372	ddx54	100	89.779	Poecilia_reticulata
ENSCVAG00000022404	ddx54	98	60.277	ENSPPYG00000004984	DDX54	97	60.369	Pongo_abelii
ENSCVAG00000022404	ddx54	98	56.522	ENSPCAG00000008462	DDX54	97	56.163	Procavia_capensis
ENSCVAG00000022404	ddx54	98	59.649	ENSPCOG00000006050	DDX54	97	60.093	Propithecus_coquereli
ENSCVAG00000022404	ddx54	91	79.545	ENSPVAG00000017347	DDX54	89	79.323	Pteropus_vampyrus
ENSCVAG00000022404	ddx54	100	74.160	ENSPNAG00000014459	ddx54	97	80.784	Pygocentrus_nattereri
ENSCVAG00000022404	ddx54	98	60.976	ENSRNOG00000001377	Ddx54	93	60.487	Rattus_norvegicus
ENSCVAG00000022404	ddx54	100	60.136	ENSRBIG00000032535	DDX54	96	60.436	Rhinopithecus_bieti
ENSCVAG00000022404	ddx54	100	56.200	ENSRROG00000029557	DDX54	96	56.697	Rhinopithecus_roxellana
ENSCVAG00000022404	ddx54	81	37.468	YDL031W	-	77	37.468	Saccharomyces_cerevisiae
ENSCVAG00000022404	ddx54	98	60.575	ENSSBOG00000028194	DDX54	97	60.529	Saimiri_boliviensis_boliviensis
ENSCVAG00000022404	ddx54	95	59.420	ENSSHAG00000015646	DDX54	99	60.964	Sarcophilus_harrisii
ENSCVAG00000022404	ddx54	97	77.300	ENSSFOG00015014981	ddx54	100	75.406	Scleropages_formosus
ENSCVAG00000022404	ddx54	98	79.322	ENSSMAG00000003210	ddx54	100	79.587	Scophthalmus_maximus
ENSCVAG00000022404	ddx54	98	81.765	ENSSDUG00000004474	ddx54	100	81.984	Seriola_dumerili
ENSCVAG00000022404	ddx54	98	81.417	ENSSLDG00000010380	ddx54	100	81.756	Seriola_lalandi_dorsalis
ENSCVAG00000022404	ddx54	97	64.923	ENSSPUG00000014141	DDX54	95	64.243	Sphenodon_punctatus
ENSCVAG00000022404	ddx54	93	79.276	ENSSPAG00000022918	ddx54	97	79.390	Stegastes_partitus
ENSCVAG00000022404	ddx54	98	60.347	ENSSSCG00000009876	DDX54	97	60.487	Sus_scrofa
ENSCVAG00000022404	ddx54	94	63.447	ENSTGUG00000009126	DDX54	100	62.885	Taeniopygia_guttata
ENSCVAG00000022404	ddx54	100	79.469	ENSTRUG00000014939	ddx54	100	79.815	Takifugu_rubripes
ENSCVAG00000022404	ddx54	100	77.880	ENSTNIG00000009037	ddx54	100	77.803	Tetraodon_nigroviridis
ENSCVAG00000022404	ddx54	74	80.000	ENSTBEG00000003783	DDX54	77	80.000	Tupaia_belangeri
ENSCVAG00000022404	ddx54	98	57.405	ENSTTRG00000016678	DDX54	97	58.113	Tursiops_truncatus
ENSCVAG00000022404	ddx54	98	60.116	ENSUAMG00000028387	DDX54	99	60.613	Ursus_americanus
ENSCVAG00000022404	ddx54	82	80.000	ENSUMAG00000010245	DDX54	94	80.688	Ursus_maritimus
ENSCVAG00000022404	ddx54	98	60.677	ENSVVUG00000010212	DDX54	97	60.652	Vulpes_vulpes
ENSCVAG00000022404	ddx54	99	63.793	ENSXETG00000016410	ddx54	99	64.219	Xenopus_tropicalis
ENSCVAG00000022404	ddx54	100	86.962	ENSXCOG00000002909	ddx54	100	86.992	Xiphophorus_couchianus
ENSCVAG00000022404	ddx54	100	90.012	ENSXMAG00000005312	ddx54	100	90.012	Xiphophorus_maculatus