EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCVAG00000022458 (Gene tree)
Gene ID: 107088388
Gene Symbol: polr3c (1 of many)
Alias: zgc:56348
Full Name: DNA-directed RNA polymerase III subunit RPC3-like
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Plus strand
Length: 11416 bases
Position: chrKL652717.1:1117011-1128426
Accession: 107088388
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000019115	RNA_pol_Rpc82	PF05645.13	1.5e-44	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000028228	-	2529	XM_015380523	ENSCVAP00000019115	546 (aa)	XP_015236009	UPI0007425D91

Gene Model

Click here to download ENSCVAG00000022458's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000022458's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCVAG00000022458	polr3c	100	100.000	ENSCVAG00000009443	polr3c	100	100.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000022458	polr3c	99	62.477	ENSG00000186141	POLR3C	99	62.274	Homo_sapiens
ENSCVAG00000022458	polr3c	100	85.165	ENSAPOG00000008722	polr3c	99	85.714	Acanthochromis_polyacanthus
ENSCVAG00000022458	polr3c	99	63.206	ENSAMEG00000017531	POLR3C	99	61.939	Ailuropoda_melanoleuca
ENSCVAG00000022458	polr3c	100	84.854	ENSACIG00000008064	polr3c	100	84.854	Amphilophus_citrinellus
ENSCVAG00000022458	polr3c	100	84.982	ENSAOCG00000011695	polr3c	99	85.584	Amphiprion_ocellaris
ENSCVAG00000022458	polr3c	100	85.165	ENSAPEG00000004426	polr3c	99	85.766	Amphiprion_percula
ENSCVAG00000022458	polr3c	100	84.615	ENSATEG00000023618	polr3c	92	83.883	Anabas_testudineus
ENSCVAG00000022458	polr3c	99	62.659	ENSANAG00000036434	POLR3C	99	62.455	Aotus_nancymaae
ENSCVAG00000022458	polr3c	100	85.714	ENSACLG00000019970	polr3c	99	85.714	Astatotilapia_calliptera
ENSCVAG00000022458	polr3c	100	72.395	ENSAMXG00000008273	polr3c	99	72.000	Astyanax_mexicanus
ENSCVAG00000022458	polr3c	99	63.570	ENSBTAG00000021637	POLR3C	99	63.177	Bos_taurus
ENSCVAG00000022458	polr3c	99	62.477	ENSCJAG00000002314	POLR3C	99	62.274	Callithrix_jacchus
ENSCVAG00000022458	polr3c	99	63.206	ENSCAFG00000011257	POLR3C	99	62.667	Canis_familiaris
ENSCVAG00000022458	polr3c	95	62.667	ENSCAFG00020020066	POLR3C	99	62.667	Canis_lupus_dingo
ENSCVAG00000022458	polr3c	99	63.570	ENSCHIG00000022431	POLR3C	99	63.177	Capra_hircus
ENSCVAG00000022458	polr3c	99	62.613	ENSTSYG00000002292	POLR3C	99	62.094	Carlito_syrichta
ENSCVAG00000022458	polr3c	95	49.427	ENSCAPG00000011559	POLR3C	100	49.715	Cavia_aperea
ENSCVAG00000022458	polr3c	99	61.931	ENSCPOG00000004654	POLR3C	99	62.138	Cavia_porcellus
ENSCVAG00000022458	polr3c	99	62.659	ENSCCAG00000027077	POLR3C	99	62.455	Cebus_capucinus
ENSCVAG00000022458	polr3c	99	62.295	ENSCATG00000040166	POLR3C	99	62.094	Cercocebus_atys
ENSCVAG00000022458	polr3c	89	72.441	ENSCLAG00000001652	POLR3C	99	72.441	Chinchilla_lanigera
ENSCVAG00000022458	polr3c	99	62.659	ENSCSAG00000001762	POLR3C	99	62.455	Chlorocebus_sabaeus
ENSCVAG00000022458	polr3c	99	61.384	ENSCHOG00000006911	POLR3C	99	61.011	Choloepus_hoffmanni
ENSCVAG00000022458	polr3c	99	64.299	ENSCPBG00000007883	POLR3C	99	63.899	Chrysemys_picta_bellii
ENSCVAG00000022458	polr3c	100	41.261	ENSCING00000007024	-	100	41.198	Ciona_intestinalis
ENSCVAG00000022458	polr3c	99	42.545	ENSCSAVG00000008586	-	99	42.364	Ciona_savignyi
ENSCVAG00000022458	polr3c	99	62.477	ENSCANG00000032538	POLR3C	99	62.274	Colobus_angolensis_palliatus
ENSCVAG00000022458	polr3c	99	62.364	ENSCGRG00001005471	Polr3c	99	62.025	Cricetulus_griseus_chok1gshd
ENSCVAG00000022458	polr3c	99	62.364	ENSCGRG00000016787	Polr3c	99	62.025	Cricetulus_griseus_crigri
ENSCVAG00000022458	polr3c	100	82.051	ENSCSEG00000002425	polr3c	99	81.685	Cynoglossus_semilaevis
ENSCVAG00000022458	polr3c	100	75.320	ENSDARG00000057562	polr3c	99	74.954	Danio_rerio
ENSCVAG00000022458	polr3c	72	64.141	ENSDNOG00000012149	POLR3C	99	64.141	Dasypus_novemcinctus
ENSCVAG00000022458	polr3c	99	63.139	ENSDORG00000013430	Polr3c	99	62.387	Dipodomys_ordii
ENSCVAG00000022458	polr3c	99	31.009	FBgn0038057	CG12267	97	31.136	Drosophila_melanogaster
ENSCVAG00000022458	polr3c	99	55.009	ENSETEG00000017696	POLR3C	99	54.710	Echinops_telfairi
ENSCVAG00000022458	polr3c	99	62.477	ENSEASG00005007417	POLR3C	99	62.094	Equus_asinus_asinus
ENSCVAG00000022458	polr3c	99	60.656	ENSECAG00000023713	POLR3C	99	60.289	Equus_caballus
ENSCVAG00000022458	polr3c	99	61.679	ENSEEUG00000011124	POLR3C	99	60.432	Erinaceus_europaeus
ENSCVAG00000022458	polr3c	99	79.190	ENSELUG00000013209	polr3c	99	79.742	Esox_lucius
ENSCVAG00000022458	polr3c	99	62.749	ENSFCAG00000013360	POLR3C	99	62.143	Felis_catus
ENSCVAG00000022458	polr3c	99	62.659	ENSFDAG00000021078	POLR3C	99	62.050	Fukomys_damarensis
ENSCVAG00000022458	polr3c	100	91.392	ENSFHEG00000000872	polr3c	100	91.392	Fundulus_heteroclitus
ENSCVAG00000022458	polr3c	99	78.571	ENSGMOG00000018937	polr3c	99	77.839	Gadus_morhua
ENSCVAG00000022458	polr3c	86	58.873	ENSGALG00000052515	-	100	57.819	Gallus_gallus
ENSCVAG00000022458	polr3c	100	91.209	ENSGAFG00000014721	polr3c	100	91.209	Gambusia_affinis
ENSCVAG00000022458	polr3c	100	84.249	ENSGACG00000011829	polr3c	99	84.066	Gasterosteus_aculeatus
ENSCVAG00000022458	polr3c	99	64.481	ENSGAGG00000010176	POLR3C	99	64.079	Gopherus_agassizii
ENSCVAG00000022458	polr3c	99	62.295	ENSGGOG00000007279	POLR3C	99	62.094	Gorilla_gorilla
ENSCVAG00000022458	polr3c	100	85.714	ENSHBUG00000003619	polr3c	99	85.714	Haplochromis_burtoni
ENSCVAG00000022458	polr3c	99	62.113	ENSHGLG00000014978	POLR3C	99	62.138	Heterocephalus_glaber_female
ENSCVAG00000022458	polr3c	99	62.113	ENSHGLG00100015620	POLR3C	99	62.138	Heterocephalus_glaber_male
ENSCVAG00000022458	polr3c	100	78.755	ENSHCOG00000000823	polr3c	99	77.839	Hippocampus_comes
ENSCVAG00000022458	polr3c	100	74.635	ENSIPUG00000008657	polr3c	99	74.635	Ictalurus_punctatus
ENSCVAG00000022458	polr3c	99	62.842	ENSSTOG00000014601	POLR3C	99	62.862	Ictidomys_tridecemlineatus
ENSCVAG00000022458	polr3c	99	63.752	ENSJJAG00000011447	Polr3c	99	63.225	Jaculus_jaculus
ENSCVAG00000022458	polr3c	100	86.813	ENSKMAG00000001574	polr3c	99	86.264	Kryptolebias_marmoratus
ENSCVAG00000022458	polr3c	99	85.294	ENSLBEG00000026567	polr3c	99	83.883	Labrus_bergylta
ENSCVAG00000022458	polr3c	99	62.774	ENSLACG00000017216	POLR3C	99	62.250	Latimeria_chalumnae
ENSCVAG00000022458	polr3c	100	63.752	ENSLOCG00000006400	polr3c	99	63.225	Lepisosteus_oculatus
ENSCVAG00000022458	polr3c	99	63.024	ENSLAFG00000029485	POLR3C	99	62.635	Loxodonta_africana
ENSCVAG00000022458	polr3c	99	62.477	ENSMFAG00000040338	POLR3C	99	62.274	Macaca_fascicularis
ENSCVAG00000022458	polr3c	99	62.477	ENSMMUG00000016735	POLR3C	99	62.274	Macaca_mulatta
ENSCVAG00000022458	polr3c	99	62.477	ENSMNEG00000040944	POLR3C	99	62.274	Macaca_nemestrina
ENSCVAG00000022458	polr3c	99	62.477	ENSMLEG00000031091	POLR3C	99	62.274	Mandrillus_leucophaeus
ENSCVAG00000022458	polr3c	100	84.799	ENSMAMG00000014770	polr3c	99	84.066	Mastacembelus_armatus
ENSCVAG00000022458	polr3c	100	84.982	ENSMZEG00005015882	polr3c	99	84.982	Maylandia_zebra
ENSCVAG00000022458	polr3c	99	62.545	ENSMAUG00000001454	-	99	62.206	Mesocricetus_auratus
ENSCVAG00000022458	polr3c	78	51.395	ENSMAUG00000021521	-	98	51.389	Mesocricetus_auratus
ENSCVAG00000022458	polr3c	99	62.842	ENSMICG00000034253	POLR3C	99	62.094	Microcebus_murinus
ENSCVAG00000022458	polr3c	99	58.899	ENSMOCG00000000997	Polr3c	99	58.394	Microtus_ochrogaster
ENSCVAG00000022458	polr3c	100	84.066	ENSMMOG00000003989	polr3c	100	83.883	Mola_mola
ENSCVAG00000022458	polr3c	99	64.481	ENSMODG00000018745	-	74	64.481	Monodelphis_domestica
ENSCVAG00000022458	polr3c	99	84.926	ENSMALG00000000156	polr3c	99	84.375	Monopterus_albus
ENSCVAG00000022458	polr3c	99	62.774	MGP_CAROLIEiJ_G0025390	Polr3c	99	62.432	Mus_caroli
ENSCVAG00000022458	polr3c	99	62.956	ENSMUSG00000028099	Polr3c	99	62.387	Mus_musculus
ENSCVAG00000022458	polr3c	99	62.774	MGP_PahariEiJ_G0026835	Polr3c	99	62.206	Mus_pahari
ENSCVAG00000022458	polr3c	99	62.226	MGP_SPRETEiJ_G0026337	Polr3c	99	62.025	Mus_spretus
ENSCVAG00000022458	polr3c	99	63.206	ENSMPUG00000000656	POLR3C	99	61.538	Mustela_putorius_furo
ENSCVAG00000022458	polr3c	99	62.795	ENSMLUG00000004060	POLR3C	99	62.795	Myotis_lucifugus
ENSCVAG00000022458	polr3c	99	62.044	ENSNGAG00000013090	Polr3c	99	62.025	Nannospalax_galili
ENSCVAG00000022458	polr3c	100	85.714	ENSNBRG00000003707	polr3c	99	85.714	Neolamprologus_brichardi
ENSCVAG00000022458	polr3c	99	62.477	ENSNLEG00000005645	POLR3C	99	62.274	Nomascus_leucogenys
ENSCVAG00000022458	polr3c	87	75.200	ENSMEUG00000012664	POLR3C	86	75.200	Notamacropus_eugenii
ENSCVAG00000022458	polr3c	99	61.202	ENSOPRG00000004244	POLR3C	99	60.507	Ochotona_princeps
ENSCVAG00000022458	polr3c	99	62.295	ENSODEG00000000304	POLR3C	99	61.913	Octodon_degus
ENSCVAG00000022458	polr3c	100	86.081	ENSONIG00000006370	polr3c	99	86.081	Oreochromis_niloticus
ENSCVAG00000022458	polr3c	68	45.358	ENSOANG00000000559	-	100	45.358	Ornithorhynchus_anatinus
ENSCVAG00000022458	polr3c	99	62.842	ENSOCUG00000003050	POLR3C	99	62.319	Oryctolagus_cuniculus
ENSCVAG00000022458	polr3c	99	86.055	ENSORLG00000010133	polr3c	99	85.321	Oryzias_latipes
ENSCVAG00000022458	polr3c	99	85.138	ENSORLG00020009245	polr3c	99	84.826	Oryzias_latipes_hni
ENSCVAG00000022458	polr3c	99	85.505	ENSORLG00015015223	polr3c	99	84.771	Oryzias_latipes_hsok
ENSCVAG00000022458	polr3c	100	85.531	ENSOMEG00000008558	polr3c	99	84.615	Oryzias_melastigma
ENSCVAG00000022458	polr3c	99	62.113	ENSOGAG00000000209	POLR3C	99	61.552	Otolemur_garnettii
ENSCVAG00000022458	polr3c	99	63.570	ENSOARG00000020588	POLR3C	99	63.177	Ovis_aries
ENSCVAG00000022458	polr3c	99	62.659	ENSPPAG00000025184	POLR3C	99	62.455	Pan_paniscus
ENSCVAG00000022458	polr3c	99	62.749	ENSPPRG00000008809	POLR3C	99	62.143	Panthera_pardus
ENSCVAG00000022458	polr3c	99	62.749	ENSPTIG00000009916	POLR3C	99	62.143	Panthera_tigris_altaica
ENSCVAG00000022458	polr3c	99	62.477	ENSPTRG00000001208	POLR3C	99	62.274	Pan_troglodytes
ENSCVAG00000022458	polr3c	99	62.477	ENSPANG00000019404	POLR3C	99	62.274	Papio_anubis
ENSCVAG00000022458	polr3c	100	71.636	ENSPKIG00000014883	polr3c	99	71.043	Paramormyrops_kingsleyae
ENSCVAG00000022458	polr3c	99	63.934	ENSPSIG00000004694	POLR3C	99	63.177	Pelodiscus_sinensis
ENSCVAG00000022458	polr3c	99	80.550	ENSPMGG00000007761	polr3c	99	79.890	Periophthalmus_magnuspinnatus
ENSCVAG00000022458	polr3c	99	62.364	ENSPEMG00000016322	Polr3c	99	61.982	Peromyscus_maniculatus_bairdii
ENSCVAG00000022458	polr3c	99	57.971	ENSPMAG00000006993	polr3c	99	57.971	Petromyzon_marinus
ENSCVAG00000022458	polr3c	99	63.934	ENSPCIG00000011954	POLR3C	99	63.063	Phascolarctos_cinereus
ENSCVAG00000022458	polr3c	100	89.762	ENSPFOG00000014106	polr3c	100	90.311	Poecilia_formosa
ENSCVAG00000022458	polr3c	100	91.026	ENSPLAG00000018932	polr3c	100	91.026	Poecilia_latipinna
ENSCVAG00000022458	polr3c	100	89.945	ENSPMEG00000023273	polr3c	100	90.311	Poecilia_mexicana
ENSCVAG00000022458	polr3c	100	89.927	ENSPREG00000017050	polr3c	100	90.110	Poecilia_reticulata
ENSCVAG00000022458	polr3c	99	62.659	ENSPPYG00000000936	POLR3C	99	62.455	Pongo_abelii
ENSCVAG00000022458	polr3c	91	63.200	ENSPCAG00000010501	POLR3C	99	62.130	Procavia_capensis
ENSCVAG00000022458	polr3c	87	75.200	ENSPCOG00000024937	POLR3C	99	75.200	Propithecus_coquereli
ENSCVAG00000022458	polr3c	99	62.295	ENSPVAG00000014483	POLR3C	99	61.913	Pteropus_vampyrus
ENSCVAG00000022458	polr3c	100	85.897	ENSPNYG00000004504	polr3c	99	85.897	Pundamilia_nyererei
ENSCVAG00000022458	polr3c	98	74.026	ENSPNAG00000018675	polr3c	99	74.088	Pygocentrus_nattereri
ENSCVAG00000022458	polr3c	99	62.226	ENSRNOG00000033560	Polr3c	99	62.025	Rattus_norvegicus
ENSCVAG00000022458	polr3c	99	62.295	ENSRBIG00000035432	POLR3C	99	62.094	Rhinopithecus_bieti
ENSCVAG00000022458	polr3c	99	62.295	ENSRROG00000039959	POLR3C	99	62.094	Rhinopithecus_roxellana
ENSCVAG00000022458	polr3c	91	61.694	ENSSBOG00000028429	POLR3C	99	61.477	Saimiri_boliviensis_boliviensis
ENSCVAG00000022458	polr3c	99	63.388	ENSSHAG00000018565	POLR3C	99	62.523	Sarcophilus_harrisii
ENSCVAG00000022458	polr3c	99	72.943	ENSSFOG00015021863	polr3c	99	72.810	Scleropages_formosus
ENSCVAG00000022458	polr3c	100	84.489	ENSSMAG00000016000	polr3c	99	84.672	Scophthalmus_maximus
ENSCVAG00000022458	polr3c	100	85.219	ENSSDUG00000006590	polr3c	99	84.432	Seriola_dumerili
ENSCVAG00000022458	polr3c	100	84.307	ENSSLDG00000015614	polr3c	99	82.967	Seriola_lalandi_dorsalis
ENSCVAG00000022458	polr3c	61	68.955	ENSSARG00000014380	POLR3C	99	68.955	Sorex_araneus
ENSCVAG00000022458	polr3c	99	64.299	ENSSPUG00000001834	POLR3C	99	63.768	Sphenodon_punctatus
ENSCVAG00000022458	polr3c	100	86.813	ENSSPAG00000022520	polr3c	99	86.813	Stegastes_partitus
ENSCVAG00000022458	polr3c	99	63.024	ENSSSCG00000006691	POLR3C	99	62.455	Sus_scrofa
ENSCVAG00000022458	polr3c	99	59.927	ENSTGUG00000016941	POLR3C	99	58.792	Taeniopygia_guttata
ENSCVAG00000022458	polr3c	100	81.868	ENSTRUG00000010726	polr3c	100	81.502	Takifugu_rubripes
ENSCVAG00000022458	polr3c	100	83.150	ENSTNIG00000019501	polr3c	100	82.967	Tetraodon_nigroviridis
ENSCVAG00000022458	polr3c	75	63.504	ENSTBEG00000015610	POLR3C	99	63.504	Tupaia_belangeri
ENSCVAG00000022458	polr3c	53	62.705	ENSTTRG00000009216	POLR3C	55	62.705	Tursiops_truncatus
ENSCVAG00000022458	polr3c	99	63.206	ENSUAMG00000021906	POLR3C	99	61.939	Ursus_americanus
ENSCVAG00000022458	polr3c	99	63.206	ENSUMAG00000010180	POLR3C	99	61.939	Ursus_maritimus
ENSCVAG00000022458	polr3c	99	63.206	ENSVVUG00000007421	POLR3C	99	61.538	Vulpes_vulpes
ENSCVAG00000022458	polr3c	100	82.664	ENSXCOG00000019524	polr3c	100	82.482	Xiphophorus_couchianus
ENSCVAG00000022458	polr3c	100	90.476	ENSXMAG00000016215	polr3c	100	90.476	Xiphophorus_maculatus