EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCVAG00000022479 (Gene tree)
Gene ID: 107098648
Gene Symbol: rif1
Alias: fc38c03|si:dkey-89p3.2|wu:fc38c03
Full Name: replication timing regulatory factor 1
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Plus strand
Length: 37044 bases
Position: chrKL653296.1:103582-140625
Accession: 107098648
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000032456	Rif1_N	PF12231.8	8.1e-79	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000028273	-	7761	XM_015396418	ENSCVAP00000032456	2380 (aa)	XP_015251904	-

Gene Model

Click here to download ENSCVAG00000022479's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000022479's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000022479	rif1	68	48.676	ENSG00000080345	RIF1	97	52.009	Homo_sapiens
ENSCVAG00000022479	rif1	85	71.591	ENSAPOG00000011073	rif1	79	71.591	Acanthochromis_polyacanthus
ENSCVAG00000022479	rif1	67	48.424	ENSAMEG00000008461	RIF1	63	48.424	Ailuropoda_melanoleuca
ENSCVAG00000022479	rif1	95	66.942	ENSACIG00000017765	rif1	100	67.102	Amphilophus_citrinellus
ENSCVAG00000022479	rif1	100	55.582	ENSAOCG00000017231	rif1	83	64.904	Amphiprion_ocellaris
ENSCVAG00000022479	rif1	97	72.351	ENSAPEG00000013228	rif1	99	72.351	Amphiprion_percula
ENSCVAG00000022479	rif1	96	69.048	ENSATEG00000022887	rif1	99	69.048	Anabas_testudineus
ENSCVAG00000022479	rif1	51	48.924	ENSAPLG00000007092	RIF1	54	48.852	Anas_platyrhynchos
ENSCVAG00000022479	rif1	68	48.655	ENSANAG00000024840	RIF1	64	48.286	Aotus_nancymaae
ENSCVAG00000022479	rif1	78	56.064	ENSAMXG00000010910	rif1	76	56.209	Astyanax_mexicanus
ENSCVAG00000022479	rif1	63	48.443	ENSBTAG00000021020	RIF1	64	47.771	Bos_taurus
ENSCVAG00000022479	rif1	68	48.872	ENSCJAG00000003138	RIF1	64	48.949	Callithrix_jacchus
ENSCVAG00000022479	rif1	68	49.258	ENSCAFG00000005670	RIF1	62	49.258	Canis_familiaris
ENSCVAG00000022479	rif1	68	49.258	ENSCAFG00020016401	RIF1	65	49.258	Canis_lupus_dingo
ENSCVAG00000022479	rif1	70	47.758	ENSCHIG00000020327	RIF1	66	47.758	Capra_hircus
ENSCVAG00000022479	rif1	67	48.961	ENSTSYG00000008861	RIF1	62	48.961	Carlito_syrichta
ENSCVAG00000022479	rif1	56	41.840	ENSCAPG00000008957	RIF1	69	41.840	Cavia_aperea
ENSCVAG00000022479	rif1	66	46.890	ENSCPOG00000037898	RIF1	64	46.636	Cavia_porcellus
ENSCVAG00000022479	rif1	68	47.229	ENSCCAG00000024760	RIF1	63	47.229	Cebus_capucinus
ENSCVAG00000022479	rif1	53	48.832	ENSCATG00000033353	RIF1	66	48.832	Cercocebus_atys
ENSCVAG00000022479	rif1	54	47.862	ENSCSAG00000016089	RIF1	51	47.862	Chlorocebus_sabaeus
ENSCVAG00000022479	rif1	65	51.802	ENSCHOG00000007187	RIF1	61	51.802	Choloepus_hoffmanni
ENSCVAG00000022479	rif1	67	48.632	ENSCPBG00000025885	RIF1	70	48.664	Chrysemys_picta_bellii
ENSCVAG00000022479	rif1	70	47.564	ENSCANG00000028962	RIF1	65	48.724	Colobus_angolensis_palliatus
ENSCVAG00000022479	rif1	69	45.360	ENSCGRG00001024589	Rif1	67	45.245	Cricetulus_griseus_chok1gshd
ENSCVAG00000022479	rif1	68	46.524	ENSCGRG00000010713	Rif1	66	46.677	Cricetulus_griseus_crigri
ENSCVAG00000022479	rif1	96	55.175	ENSCSEG00000003945	rif1	99	55.080	Cynoglossus_semilaevis
ENSCVAG00000022479	rif1	61	54.747	ENSDARG00000062650	rif1	81	54.763	Danio_rerio
ENSCVAG00000022479	rif1	68	47.278	ENSDNOG00000011194	RIF1	62	47.332	Dasypus_novemcinctus
ENSCVAG00000022479	rif1	63	52.091	ENSETEG00000012421	RIF1	61	52.091	Echinops_telfairi
ENSCVAG00000022479	rif1	50	68.092	ENSEASG00005023434	RIF1	51	68.092	Equus_asinus_asinus
ENSCVAG00000022479	rif1	65	55.230	ENSECAG00000012679	RIF1	62	55.230	Equus_caballus
ENSCVAG00000022479	rif1	88	63.352	ENSELUG00000006826	rif1	64	63.352	Esox_lucius
ENSCVAG00000022479	rif1	68	47.896	ENSFCAG00000029742	RIF1	64	48.089	Felis_catus
ENSCVAG00000022479	rif1	64	48.033	ENSFALG00000013874	RIF1	70	48.444	Ficedula_albicollis
ENSCVAG00000022479	rif1	68	47.637	ENSFDAG00000006538	RIF1	64	47.816	Fukomys_damarensis
ENSCVAG00000022479	rif1	100	66.502	ENSFHEG00000013721	rif1	99	66.502	Fundulus_heteroclitus
ENSCVAG00000022479	rif1	68	58.389	ENSGMOG00000003517	rif1	100	57.218	Gadus_morhua
ENSCVAG00000022479	rif1	97	78.846	ENSGAFG00000017196	rif1	99	78.846	Gambusia_affinis
ENSCVAG00000022479	rif1	77	56.370	ENSGACG00000008579	rif1	79	58.101	Gasterosteus_aculeatus
ENSCVAG00000022479	rif1	67	48.276	ENSGAGG00000012595	RIF1	69	47.458	Gopherus_agassizii
ENSCVAG00000022479	rif1	60	52.174	ENSHGLG00100009807	RIF1	62	52.174	Heterocephalus_glaber_male
ENSCVAG00000022479	rif1	97	60.813	ENSHCOG00000015943	rif1	72	60.229	Hippocampus_comes
ENSCVAG00000022479	rif1	62	54.587	ENSIPUG00000021703	rif1	62	55.135	Ictalurus_punctatus
ENSCVAG00000022479	rif1	67	48.439	ENSSTOG00000020712	RIF1	63	48.439	Ictidomys_tridecemlineatus
ENSCVAG00000022479	rif1	53	46.266	ENSJJAG00000023000	Rif1	52	46.195	Jaculus_jaculus
ENSCVAG00000022479	rif1	100	60.688	ENSKMAG00000002852	rif1	99	60.434	Kryptolebias_marmoratus
ENSCVAG00000022479	rif1	93	68.783	ENSLBEG00000023196	rif1	76	73.952	Labrus_bergylta
ENSCVAG00000022479	rif1	68	55.939	ENSLOCG00000002657	rif1	82	56.091	Lepisosteus_oculatus
ENSCVAG00000022479	rif1	69	48.419	ENSLAFG00000009796	RIF1	64	48.419	Loxodonta_africana
ENSCVAG00000022479	rif1	53	49.024	ENSMFAG00000032233	RIF1	51	49.024	Macaca_fascicularis
ENSCVAG00000022479	rif1	53	48.949	ENSMMUG00000008611	RIF1	51	48.949	Macaca_mulatta
ENSCVAG00000022479	rif1	53	48.534	ENSMNEG00000031616	RIF1	66	48.611	Macaca_nemestrina
ENSCVAG00000022479	rif1	53	48.832	ENSMLEG00000042945	RIF1	51	48.832	Mandrillus_leucophaeus
ENSCVAG00000022479	rif1	72	66.549	ENSMAMG00000001745	rif1	60	66.372	Mastacembelus_armatus
ENSCVAG00000022479	rif1	96	70.620	ENSMZEG00005020920	rif1	99	70.894	Maylandia_zebra
ENSCVAG00000022479	rif1	51	49.037	ENSMGAG00000012732	RIF1	53	49.679	Meleagris_gallopavo
ENSCVAG00000022479	rif1	64	64.463	ENSMAUG00000013158	Rif1	64	64.463	Mesocricetus_auratus
ENSCVAG00000022479	rif1	67	48.961	ENSMICG00000046127	RIF1	63	48.961	Microcebus_murinus
ENSCVAG00000022479	rif1	54	45.633	ENSMOCG00000009381	Rif1	53	45.843	Microtus_ochrogaster
ENSCVAG00000022479	rif1	99	52.972	ENSMMOG00000006519	rif1	99	52.497	Mola_mola
ENSCVAG00000022479	rif1	53	48.607	ENSMODG00000003703	RIF1	52	48.569	Monodelphis_domestica
ENSCVAG00000022479	rif1	77	67.521	ENSMALG00000016759	rif1	85	67.521	Monopterus_albus
ENSCVAG00000022479	rif1	67	48.212	MGP_CAROLIEiJ_G0023555	Rif1	65	47.951	Mus_caroli
ENSCVAG00000022479	rif1	61	50.967	ENSMUSG00000036202	Rif1	64	47.496	Mus_musculus
ENSCVAG00000022479	rif1	74	45.539	MGP_PahariEiJ_G0025006	Rif1	67	46.393	Mus_pahari
ENSCVAG00000022479	rif1	71	48.117	ENSMPUG00000000371	RIF1	66	48.117	Mustela_putorius_furo
ENSCVAG00000022479	rif1	56	46.588	ENSMLUG00000003376	RIF1	60	46.588	Myotis_lucifugus
ENSCVAG00000022479	rif1	56	46.570	ENSNGAG00000009268	Rif1	69	46.204	Nannospalax_galili
ENSCVAG00000022479	rif1	99	55.266	ENSNBRG00000014257	rif1	99	56.253	Neolamprologus_brichardi
ENSCVAG00000022479	rif1	67	48.031	ENSNLEG00000010955	RIF1	63	48.031	Nomascus_leucogenys
ENSCVAG00000022479	rif1	78	45.988	ENSODEG00000003950	RIF1	64	46.667	Octodon_degus
ENSCVAG00000022479	rif1	99	59.878	ENSONIG00000013657	rif1	100	60.891	Oreochromis_niloticus
ENSCVAG00000022479	rif1	57	51.944	ENSOANG00000006078	-	55	51.944	Ornithorhynchus_anatinus
ENSCVAG00000022479	rif1	68	47.181	ENSOCUG00000017435	RIF1	64	47.181	Oryctolagus_cuniculus
ENSCVAG00000022479	rif1	99	54.715	ENSORLG00020001302	rif1	96	55.675	Oryzias_latipes_hni
ENSCVAG00000022479	rif1	99	55.058	ENSORLG00015000009	rif1	96	55.889	Oryzias_latipes_hsok
ENSCVAG00000022479	rif1	67	48.324	ENSOGAG00000006141	RIF1	63	48.324	Otolemur_garnettii
ENSCVAG00000022479	rif1	70	48.325	ENSOARG00000008930	RIF1	66	48.325	Ovis_aries
ENSCVAG00000022479	rif1	68	48.754	ENSPPAG00000023754	RIF1	64	48.790	Pan_paniscus
ENSCVAG00000022479	rif1	68	47.819	ENSPPRG00000003618	RIF1	64	48.125	Panthera_pardus
ENSCVAG00000022479	rif1	68	47.819	ENSPTIG00000020652	RIF1	64	48.125	Panthera_tigris_altaica
ENSCVAG00000022479	rif1	68	48.832	ENSPTRG00000012534	RIF1	64	48.832	Pan_troglodytes
ENSCVAG00000022479	rif1	53	48.910	ENSPANG00000008525	RIF1	51	48.910	Papio_anubis
ENSCVAG00000022479	rif1	77	61.080	ENSPMGG00000016141	rif1	88	61.080	Periophthalmus_magnuspinnatus
ENSCVAG00000022479	rif1	68	47.356	ENSPEMG00000000446	Rif1	67	46.750	Peromyscus_maniculatus_bairdii
ENSCVAG00000022479	rif1	67	48.497	ENSPCIG00000009185	RIF1	66	48.497	Phascolarctos_cinereus
ENSCVAG00000022479	rif1	92	66.459	ENSPFOG00000000554	-	99	66.326	Poecilia_formosa
ENSCVAG00000022479	rif1	100	67.928	ENSPFOG00000017804	rif1	99	67.804	Poecilia_formosa
ENSCVAG00000022479	rif1	96	73.241	ENSPLAG00000017945	rif1	99	73.241	Poecilia_latipinna
ENSCVAG00000022479	rif1	90	66.162	ENSPMEG00000006897	-	99	66.025	Poecilia_mexicana
ENSCVAG00000022479	rif1	93	97.753	ENSPREG00000018052	rif1	95	79.682	Poecilia_reticulata
ENSCVAG00000022479	rif1	68	48.946	ENSPPYG00000012846	RIF1	64	48.946	Pongo_abelii
ENSCVAG00000022479	rif1	69	48.422	ENSPCOG00000027888	RIF1	65	48.422	Propithecus_coquereli
ENSCVAG00000022479	rif1	57	59.592	ENSPVAG00000014276	RIF1	57	59.592	Pteropus_vampyrus
ENSCVAG00000022479	rif1	96	71.442	ENSPNYG00000012940	rif1	99	71.442	Pundamilia_nyererei
ENSCVAG00000022479	rif1	93	51.111	ENSPNAG00000016685	rif1	80	56.588	Pygocentrus_nattereri
ENSCVAG00000022479	rif1	66	46.787	ENSRNOG00000054901	Rif1	65	46.565	Rattus_norvegicus
ENSCVAG00000022479	rif1	70	47.975	ENSRBIG00000003704	RIF1	65	48.131	Rhinopithecus_bieti
ENSCVAG00000022479	rif1	71	48.137	ENSRROG00000028206	RIF1	67	48.137	Rhinopithecus_roxellana
ENSCVAG00000022479	rif1	65	56.627	ENSSBOG00000029530	RIF1	63	56.627	Saimiri_boliviensis_boliviensis
ENSCVAG00000022479	rif1	70	48.905	ENSSHAG00000018552	RIF1	68	48.983	Sarcophilus_harrisii
ENSCVAG00000022479	rif1	75	59.270	ENSSFOG00015021539	rif1	80	59.270	Scleropages_formosus
ENSCVAG00000022479	rif1	96	70.115	ENSSMAG00000011704	rif1	86	72.159	Scophthalmus_maximus
ENSCVAG00000022479	rif1	94	70.226	ENSSDUG00000015632	rif1	62	70.294	Seriola_dumerili
ENSCVAG00000022479	rif1	99	60.406	ENSSLDG00000019531	rif1	99	60.767	Seriola_lalandi_dorsalis
ENSCVAG00000022479	rif1	66	48.293	ENSSPUG00000003062	RIF1	67	48.293	Sphenodon_punctatus
ENSCVAG00000022479	rif1	62	73.038	ENSSPAG00000018359	rif1	99	73.038	Stegastes_partitus
ENSCVAG00000022479	rif1	73	47.921	ENSSSCG00000016395	RIF1	64	47.997	Sus_scrofa
ENSCVAG00000022479	rif1	99	55.579	ENSTRUG00000015808	rif1	93	65.193	Takifugu_rubripes
ENSCVAG00000022479	rif1	99	54.156	ENSTNIG00000011538	rif1	78	56.967	Tetraodon_nigroviridis
ENSCVAG00000022479	rif1	61	62.791	ENSTBEG00000016082	RIF1	55	53.878	Tupaia_belangeri
ENSCVAG00000022479	rif1	68	48.239	ENSTTRG00000011190	RIF1	64	48.009	Tursiops_truncatus
ENSCVAG00000022479	rif1	57	47.941	ENSUAMG00000026385	RIF1	59	47.941	Ursus_americanus
ENSCVAG00000022479	rif1	67	47.941	ENSUMAG00000000337	RIF1	63	47.941	Ursus_maritimus
ENSCVAG00000022479	rif1	70	46.915	ENSVPAG00000002162	RIF1	65	46.915	Vicugna_pacos
ENSCVAG00000022479	rif1	68	49.258	ENSVVUG00000011293	RIF1	64	49.258	Vulpes_vulpes
ENSCVAG00000022479	rif1	52	45.972	ENSXETG00000004530	rif1	51	46.263	Xenopus_tropicalis
ENSCVAG00000022479	rif1	97	77.358	ENSXMAG00000000506	rif1	99	77.358	Xiphophorus_maculatus