EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCVAG00000022649 (Gene tree)
Gene ID: 107088422
Gene Symbol: -
Alias: -
Full Name: RAB13%2C member RAS oncogene family
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Plus strand
Length: 15085 bases
Position: chrKL652717.1:979589-994673
Accession: 107088422
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000019309	MMR_HSR1	PF01926.23	8.6e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000028453	-	3330	XM_015380584	ENSCVAP00000019309	200 (aa)	XP_015236070	UPI000742C0FE

Gene Model

Click here to download ENSCVAG00000022649's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000022649's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCVAG00000022649	-	61	31.707	ENSCVAG00000013902	-	73	31.707
ENSCVAG00000022649	-	98	54.082	ENSCVAG00000009222	zgc:171927	90	54.082
ENSCVAG00000022649	-	81	39.752	ENSCVAG00000018433	rab22a	83	39.752
ENSCVAG00000022649	-	97	38.942	ENSCVAG00000022353	rab14	96	38.942
ENSCVAG00000022649	-	90	43.243	ENSCVAG00000015451	rab18a	88	43.243
ENSCVAG00000022649	-	88	38.547	ENSCVAG00000005429	-	86	38.547
ENSCVAG00000022649	-	79	44.937	ENSCVAG00000022249	rab6a	76	44.937
ENSCVAG00000022649	-	90	55.866	ENSCVAG00000022799	-	88	55.866
ENSCVAG00000022649	-	80	49.057	ENSCVAG00000019751	-	73	49.057
ENSCVAG00000022649	-	82	40.476	ENSCVAG00000002953	RAB9A	84	40.476
ENSCVAG00000022649	-	79	43.671	ENSCVAG00000001618	rab41	75	43.671
ENSCVAG00000022649	-	79	44.937	ENSCVAG00000004751	rab6bb	76	44.937
ENSCVAG00000022649	-	69	31.159	ENSCVAG00000021960	arl3	69	31.159
ENSCVAG00000022649	-	87	56.322	ENSCVAG00000022585	-	84	56.322
ENSCVAG00000022649	-	88	46.591	ENSCVAG00000013878	rab11a	82	46.591
ENSCVAG00000022649	-	77	34.641	ENSCVAG00000011432	rabl2	68	34.641
ENSCVAG00000022649	-	98	43.415	ENSCVAG00000020016	rab11al	95	43.415
ENSCVAG00000022649	-	95	40.625	ENSCVAG00000008239	rab5aa	89	40.625
ENSCVAG00000022649	-	79	44.304	ENSCVAG00000012889	rab6ba	76	44.304
ENSCVAG00000022649	-	95	32.474	ENSCVAG00000006083	si:cabz01085950.1	93	32.474
ENSCVAG00000022649	-	95	33.505	ENSCVAG00000001150	si:dkey-13a21.4	95	33.505
ENSCVAG00000022649	-	85	51.765	ENSCVAG00000003537	si:dkey-16l2.16	81	51.765
ENSCVAG00000022649	-	86	51.163	ENSCVAG00000003539	rab12	70	51.163
ENSCVAG00000022649	-	99	47.059	ENSCVAG00000012806	rab35b	100	46.535
ENSCVAG00000022649	-	86	45.930	ENSCVAG00000010727	rab4a	81	45.930
ENSCVAG00000022649	-	97	39.899	ENSCVAG00000020003	rab25b	96	39.062
ENSCVAG00000022649	-	96	34.694	ENSCVAG00000008389	si:ch73-116o1.2	94	35.204
ENSCVAG00000022649	-	88	37.853	ENSCVAG00000020501	rab23	90	37.566
ENSCVAG00000022649	-	85	44.767	ENSCVAG00000015862	-	81	44.767
ENSCVAG00000022649	-	91	38.743	ENSCVAG00000018191	rab34a	71	38.743
ENSCVAG00000022649	-	86	56.140	ENSCVAG00000008276	RAB15	89	62.037
ENSCVAG00000022649	-	95	42.932	ENSCVAG00000014416	-	91	42.932
ENSCVAG00000022649	-	87	35.393	ENSCVAG00000008670	hrasb	93	35.393
ENSCVAG00000022649	-	78	40.000	ENSCVAG00000016312	rab9a	75	40.000
ENSCVAG00000022649	-	77	36.364	ENSCVAG00000004027	rheb	84	36.364
ENSCVAG00000022649	-	88	38.547	ENSCVAG00000000281	RAB7A	86	38.547
ENSCVAG00000022649	-	95	39.086	ENSCVAG00000019227	zgc:101559	84	39.086
ENSCVAG00000022649	-	84	41.520	ENSCVAG00000017064	si:dkey-34d22.5	77	41.520
ENSCVAG00000022649	-	96	42.574	ENSCVAG00000017021	-	93	42.574
ENSCVAG00000022649	-	74	42.857	ENSCVAG00000000862	-	68	42.857
ENSCVAG00000022649	-	81	37.037	ENSCVAG00000006062	KRAS	98	34.715
ENSCVAG00000022649	-	82	31.548	ENSCVAG00000014662	-	77	31.548
ENSCVAG00000022649	-	97	37.313	ENSCVAG00000014038	RAB29	97	37.313
ENSCVAG00000022649	-	80	43.902	ENSCVAG00000011665	rab33a	60	43.902
ENSCVAG00000022649	-	85	45.349	ENSCVAG00000014915	RAB39B	81	45.349
ENSCVAG00000022649	-	96	42.079	ENSCVAG00000019718	-	93	42.079
ENSCVAG00000022649	-	81	42.236	ENSCVAG00000009550	rab5c	78	40.805
ENSCVAG00000022649	-	77	36.364	ENSCVAG00000001281	rhebl1	83	36.364
ENSCVAG00000022649	-	85	49.112	ENSCVAG00000018085	rab30	83	49.112
ENSCVAG00000022649	-	98	35.644	ENSCVAG00000021826	rab9b	99	35.644
ENSCVAG00000022649	-	94	40.107	ENSCVAG00000008126	-	89	40.107
ENSCVAG00000022649	-	84	47.619	ENSCVAG00000017623	rab2a	79	47.619
ENSCVAG00000022649	-	81	32.558	ENSCVAG00000013135	rasl11a	67	32.558

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000022649	-	100	93.500	ENSAPOG00000001040	-	100	93.500	Acanthochromis_polyacanthus
ENSCVAG00000022649	-	100	65.174	ENSACIG00000003157	-	100	65.174	Amphilophus_citrinellus
ENSCVAG00000022649	-	100	93.500	ENSAOCG00000015908	-	100	93.500	Amphiprion_ocellaris
ENSCVAG00000022649	-	100	93.500	ENSAPEG00000004121	-	100	93.500	Amphiprion_percula
ENSCVAG00000022649	-	100	91.000	ENSATEG00000023662	-	100	91.000	Anabas_testudineus
ENSCVAG00000022649	-	100	92.500	ENSACLG00000019643	-	100	92.500	Astatotilapia_calliptera
ENSCVAG00000022649	-	86	73.256	ENSDARG00000103934	megf8	99	73.256	Danio_rerio
ENSCVAG00000022649	-	100	95.500	ENSGAFG00000014787	-	100	95.500	Gambusia_affinis
ENSCVAG00000022649	-	100	92.500	ENSHBUG00000003728	-	100	92.500	Haplochromis_burtoni
ENSCVAG00000022649	-	100	92.500	ENSMZEG00005015817	-	100	92.500	Maylandia_zebra
ENSCVAG00000022649	-	100	92.500	ENSMMOG00000003924	-	100	92.500	Mola_mola
ENSCVAG00000022649	-	100	93.500	ENSMALG00000020807	-	100	93.500	Monopterus_albus
ENSCVAG00000022649	-	54	91.667	ENSOPRG00000014416	-	100	91.667	Ochotona_princeps
ENSCVAG00000022649	-	100	88.000	ENSORLG00000025395	-	100	88.000	Oryzias_latipes
ENSCVAG00000022649	-	100	88.000	ENSORLG00020009535	-	100	88.000	Oryzias_latipes_hni
ENSCVAG00000022649	-	100	88.500	ENSORLG00015015518	-	100	88.500	Oryzias_latipes_hsok
ENSCVAG00000022649	-	100	87.562	ENSPKIG00000014528	-	100	87.562	Paramormyrops_kingsleyae
ENSCVAG00000022649	-	100	96.500	ENSPFOG00000014418	-	100	96.500	Poecilia_formosa
ENSCVAG00000022649	-	100	96.500	ENSPLAG00000003181	-	100	96.500	Poecilia_latipinna
ENSCVAG00000022649	-	100	96.500	ENSPMEG00000008020	-	100	96.500	Poecilia_mexicana
ENSCVAG00000022649	-	100	96.500	ENSPMEG00000022988	-	100	96.500	Poecilia_mexicana
ENSCVAG00000022649	-	100	92.000	ENSPNYG00000004681	-	100	92.000	Pundamilia_nyererei
ENSCVAG00000022649	-	100	87.500	ENSSFOG00015021754	rab13	100	87.500	Scleropages_formosus
ENSCVAG00000022649	-	100	92.000	ENSSMAG00000016376	-	100	92.000	Scophthalmus_maximus
ENSCVAG00000022649	-	100	64.563	ENSSMAG00000002569	-	100	64.563	Scophthalmus_maximus
ENSCVAG00000022649	-	100	94.000	ENSSDUG00000006307	-	100	94.000	Seriola_dumerili
ENSCVAG00000022649	-	100	94.000	ENSSLDG00000015823	-	100	94.000	Seriola_lalandi_dorsalis
ENSCVAG00000022649	-	100	94.000	ENSSPAG00000022440	-	100	94.000	Stegastes_partitus
ENSCVAG00000022649	-	100	92.000	ENSTNIG00000018319	-	100	92.000	Tetraodon_nigroviridis
ENSCVAG00000022649	-	100	96.000	ENSXMAG00000016094	-	100	96.000	Xiphophorus_maculatus