EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCVAG00000022746 (Gene tree)
Gene ID: 107093517
Gene Symbol: rpusd1
Alias: fe26f08|wu:fe26f08|zgc:153465
Full Name: RNA pseudouridine synthase domain containing 1
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Minus strand
Length: 3836 bases
Position: chrKL652931.1:214430-218265
Accession: 107093517
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000019393	PseudoU_synth_2	PF00849.22	5.8e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000033127	-	2320	XM_015388630	ENSCVAP00000019393	304 (aa)	XP_015244116	UPI00074284B9

Gene Model

Click here to download ENSCVAG00000022746's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000022746's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000022746	rpusd1	98	55.195	ENSG00000007376	RPUSD1	99	65.868	Homo_sapiens
ENSCVAG00000022746	rpusd1	100	80.065	ENSAPOG00000022221	rpusd1	99	80.392	Acanthochromis_polyacanthus
ENSCVAG00000022746	rpusd1	98	59.667	ENSAMEG00000007461	RPUSD1	98	59.667	Ailuropoda_melanoleuca
ENSCVAG00000022746	rpusd1	100	79.677	ENSACIG00000015863	rpusd1	100	80.000	Amphilophus_citrinellus
ENSCVAG00000022746	rpusd1	100	80.583	ENSAOCG00000021975	rpusd1	97	81.877	Amphiprion_ocellaris
ENSCVAG00000022746	rpusd1	100	80.906	ENSAPEG00000001316	rpusd1	97	82.201	Amphiprion_percula
ENSCVAG00000022746	rpusd1	100	79.288	ENSATEG00000002984	rpusd1	99	79.288	Anabas_testudineus
ENSCVAG00000022746	rpusd1	77	59.833	ENSAPLG00000012316	RPUSD1	98	59.833	Anas_platyrhynchos
ENSCVAG00000022746	rpusd1	98	63.545	ENSACAG00000008953	RPUSD1	99	63.545	Anolis_carolinensis
ENSCVAG00000022746	rpusd1	98	55.195	ENSANAG00000024709	RPUSD1	98	55.987	Aotus_nancymaae
ENSCVAG00000022746	rpusd1	100	79.743	ENSACLG00000013692	rpusd1	100	79.743	Astatotilapia_calliptera
ENSCVAG00000022746	rpusd1	99	67.442	ENSAMXG00000019802	rpusd1	99	67.442	Astyanax_mexicanus
ENSCVAG00000022746	rpusd1	98	58.804	ENSBTAG00000000179	RPUSD1	98	59.136	Bos_taurus
ENSCVAG00000022746	rpusd1	98	54.167	ENSCJAG00000012253	RPUSD1	98	55.556	Callithrix_jacchus
ENSCVAG00000022746	rpusd1	98	58.000	ENSCAFG00000019614	RPUSD1	98	58.667	Canis_familiaris
ENSCVAG00000022746	rpusd1	98	58.000	ENSCAFG00020008891	RPUSD1	98	58.667	Canis_lupus_dingo
ENSCVAG00000022746	rpusd1	98	59.468	ENSCHIG00000012872	RPUSD1	98	59.150	Capra_hircus
ENSCVAG00000022746	rpusd1	98	55.482	ENSTSYG00000036934	RPUSD1	98	55.482	Carlito_syrichta
ENSCVAG00000022746	rpusd1	98	56.667	ENSCAPG00000014219	RPUSD1	98	56.667	Cavia_aperea
ENSCVAG00000022746	rpusd1	98	56.667	ENSCPOG00000034604	RPUSD1	98	56.667	Cavia_porcellus
ENSCVAG00000022746	rpusd1	98	55.519	ENSCCAG00000034385	RPUSD1	98	56.311	Cebus_capucinus
ENSCVAG00000022746	rpusd1	98	55.195	ENSCATG00000042983	RPUSD1	98	56.352	Cercocebus_atys
ENSCVAG00000022746	rpusd1	98	55.667	ENSCLAG00000013966	RPUSD1	98	54.575	Chinchilla_lanigera
ENSCVAG00000022746	rpusd1	98	54.902	ENSCSAG00000012121	RPUSD1	98	56.026	Chlorocebus_sabaeus
ENSCVAG00000022746	rpusd1	98	62.046	ENSCPBG00000021101	RPUSD1	99	62.046	Chrysemys_picta_bellii
ENSCVAG00000022746	rpusd1	83	62.055	ENSCANG00000028576	RPUSD1	90	62.055	Colobus_angolensis_palliatus
ENSCVAG00000022746	rpusd1	98	57.143	ENSCGRG00001014253	Rpusd1	98	57.143	Cricetulus_griseus_chok1gshd
ENSCVAG00000022746	rpusd1	98	57.143	ENSCGRG00000017995	Rpusd1	98	57.143	Cricetulus_griseus_crigri
ENSCVAG00000022746	rpusd1	99	76.080	ENSCSEG00000018512	rpusd1	99	76.080	Cynoglossus_semilaevis
ENSCVAG00000022746	rpusd1	98	71.572	ENSDARG00000060192	rpusd1	99	71.572	Danio_rerio
ENSCVAG00000022746	rpusd1	98	54.153	ENSDNOG00000003721	RPUSD1	98	54.967	Dasypus_novemcinctus
ENSCVAG00000022746	rpusd1	98	56.333	ENSDORG00000026656	Rpusd1	98	57.000	Dipodomys_ordii
ENSCVAG00000022746	rpusd1	96	46.429	ENSEBUG00000008767	rpusd1	92	46.429	Eptatretus_burgeri
ENSCVAG00000022746	rpusd1	98	55.987	ENSEASG00005018421	RPUSD1	74	55.987	Equus_asinus_asinus
ENSCVAG00000022746	rpusd1	100	69.745	ENSELUG00000014307	rpusd1	90	71.104	Esox_lucius
ENSCVAG00000022746	rpusd1	98	57.333	ENSFCAG00000010359	RPUSD1	98	57.333	Felis_catus
ENSCVAG00000022746	rpusd1	98	65.886	ENSFALG00000003211	RPUSD1	99	65.886	Ficedula_albicollis
ENSCVAG00000022746	rpusd1	98	57.000	ENSFDAG00000013398	RPUSD1	98	57.000	Fukomys_damarensis
ENSCVAG00000022746	rpusd1	100	87.622	ENSFHEG00000004736	rpusd1	100	90.554	Fundulus_heteroclitus
ENSCVAG00000022746	rpusd1	99	71.336	ENSGMOG00000010756	rpusd1	99	71.661	Gadus_morhua
ENSCVAG00000022746	rpusd1	98	63.787	ENSGALG00000005315	RPUSD1	99	63.787	Gallus_gallus
ENSCVAG00000022746	rpusd1	100	88.816	ENSGAFG00000009886	rpusd1	100	88.816	Gambusia_affinis
ENSCVAG00000022746	rpusd1	100	78.641	ENSGACG00000014276	rpusd1	100	78.641	Gasterosteus_aculeatus
ENSCVAG00000022746	rpusd1	98	62.252	ENSGAGG00000004181	RPUSD1	99	62.252	Gopherus_agassizii
ENSCVAG00000022746	rpusd1	98	55.987	ENSGGOG00000013997	RPUSD1	88	66.957	Gorilla_gorilla
ENSCVAG00000022746	rpusd1	100	80.064	ENSHBUG00000023728	rpusd1	100	80.064	Haplochromis_burtoni
ENSCVAG00000022746	rpusd1	98	55.667	ENSHGLG00000002595	RPUSD1	98	54.902	Heterocephalus_glaber_female
ENSCVAG00000022746	rpusd1	98	55.667	ENSHGLG00100014303	RPUSD1	98	54.902	Heterocephalus_glaber_male
ENSCVAG00000022746	rpusd1	99	73.856	ENSHCOG00000002390	rpusd1	99	73.856	Hippocampus_comes
ENSCVAG00000022746	rpusd1	98	65.552	ENSIPUG00000001570	rpusd1	99	65.552	Ictalurus_punctatus
ENSCVAG00000022746	rpusd1	98	55.776	ENSSTOG00000004276	RPUSD1	98	55.776	Ictidomys_tridecemlineatus
ENSCVAG00000022746	rpusd1	98	57.000	ENSJJAG00000015696	Rpusd1	98	57.000	Jaculus_jaculus
ENSCVAG00000022746	rpusd1	99	85.809	ENSKMAG00000017287	rpusd1	99	85.809	Kryptolebias_marmoratus
ENSCVAG00000022746	rpusd1	100	78.317	ENSLBEG00000013354	RPUSD1	99	78.317	Labrus_bergylta
ENSCVAG00000022746	rpusd1	100	78.317	ENSLBEG00000022502	rpusd1	99	78.317	Labrus_bergylta
ENSCVAG00000022746	rpusd1	98	62.207	ENSLACG00000008869	RPUSD1	99	62.207	Latimeria_chalumnae
ENSCVAG00000022746	rpusd1	70	80.841	ENSLOCG00000005682	rpusd1	99	80.841	Lepisosteus_oculatus
ENSCVAG00000022746	rpusd1	98	55.667	ENSLAFG00000002115	RPUSD1	98	55.667	Loxodonta_africana
ENSCVAG00000022746	rpusd1	98	55.195	ENSMFAG00000003961	RPUSD1	98	56.352	Macaca_fascicularis
ENSCVAG00000022746	rpusd1	98	55.195	ENSMMUG00000000842	RPUSD1	98	56.352	Macaca_mulatta
ENSCVAG00000022746	rpusd1	98	55.195	ENSMNEG00000042712	RPUSD1	98	56.352	Macaca_nemestrina
ENSCVAG00000022746	rpusd1	98	55.195	ENSMLEG00000030591	RPUSD1	98	56.352	Mandrillus_leucophaeus
ENSCVAG00000022746	rpusd1	100	82.581	ENSMAMG00000004735	rpusd1	99	82.581	Mastacembelus_armatus
ENSCVAG00000022746	rpusd1	100	79.743	ENSMZEG00005003214	rpusd1	100	79.743	Maylandia_zebra
ENSCVAG00000022746	rpusd1	96	64.068	ENSMGAG00000005447	RPUSD1	98	64.068	Meleagris_gallopavo
ENSCVAG00000022746	rpusd1	83	56.917	ENSMAUG00000019998	Rpusd1	96	56.917	Mesocricetus_auratus
ENSCVAG00000022746	rpusd1	98	55.333	ENSMICG00000017561	RPUSD1	98	56.478	Microcebus_murinus
ENSCVAG00000022746	rpusd1	98	58.333	ENSMOCG00000014082	Rpusd1	98	58.333	Microtus_ochrogaster
ENSCVAG00000022746	rpusd1	99	74.277	ENSMMOG00000012569	rpusd1	99	76.393	Mola_mola
ENSCVAG00000022746	rpusd1	99	62.046	ENSMODG00000016882	RPUSD1	99	62.046	Monodelphis_domestica
ENSCVAG00000022746	rpusd1	100	78.065	ENSMALG00000017818	rpusd1	99	79.032	Monopterus_albus
ENSCVAG00000022746	rpusd1	98	57.516	MGP_CAROLIEiJ_G0021244	Rpusd1	98	58.333	Mus_caroli
ENSCVAG00000022746	rpusd1	98	58.333	ENSMUSG00000041199	Rpusd1	98	58.333	Mus_musculus
ENSCVAG00000022746	rpusd1	98	57.475	MGP_PahariEiJ_G0023562	Rpusd1	98	57.475	Mus_pahari
ENSCVAG00000022746	rpusd1	98	58.333	MGP_SPRETEiJ_G0022155	Rpusd1	98	58.333	Mus_spretus
ENSCVAG00000022746	rpusd1	96	56.566	ENSMPUG00000015897	RPUSD1	96	56.902	Mustela_putorius_furo
ENSCVAG00000022746	rpusd1	98	56.250	ENSMLUG00000001089	RPUSD1	98	57.049	Myotis_lucifugus
ENSCVAG00000022746	rpusd1	98	56.811	ENSNGAG00000003595	Rpusd1	98	56.536	Nannospalax_galili
ENSCVAG00000022746	rpusd1	100	79.412	ENSNBRG00000006457	rpusd1	100	79.412	Neolamprologus_brichardi
ENSCVAG00000022746	rpusd1	53	46.512	ENSNLEG00000008424	-	97	47.399	Nomascus_leucogenys
ENSCVAG00000022746	rpusd1	98	62.542	ENSMEUG00000016049	RPUSD1	98	62.542	Notamacropus_eugenii
ENSCVAG00000022746	rpusd1	98	49.667	ENSOPRG00000008340	RPUSD1	98	49.667	Ochotona_princeps
ENSCVAG00000022746	rpusd1	98	55.482	ENSODEG00000016945	RPUSD1	98	55.482	Octodon_degus
ENSCVAG00000022746	rpusd1	99	80.195	ENSONIG00000015672	rpusd1	100	80.195	Oreochromis_niloticus
ENSCVAG00000022746	rpusd1	100	77.961	ENSORLG00000013009	rpusd1	99	77.961	Oryzias_latipes
ENSCVAG00000022746	rpusd1	100	78.618	ENSORLG00020010382	rpusd1	99	78.618	Oryzias_latipes_hni
ENSCVAG00000022746	rpusd1	100	77.303	ENSORLG00015021354	rpusd1	99	77.303	Oryzias_latipes_hsok
ENSCVAG00000022746	rpusd1	100	77.632	ENSOMEG00000021426	rpusd1	99	77.632	Oryzias_melastigma
ENSCVAG00000022746	rpusd1	98	54.693	ENSOGAG00000003795	RPUSD1	98	55.882	Otolemur_garnettii
ENSCVAG00000022746	rpusd1	98	59.136	ENSOARG00000014254	RPUSD1	98	58.766	Ovis_aries
ENSCVAG00000022746	rpusd1	98	55.519	ENSPPAG00000034797	RPUSD1	88	66.957	Pan_paniscus
ENSCVAG00000022746	rpusd1	98	57.667	ENSPPRG00000012389	RPUSD1	98	57.667	Panthera_pardus
ENSCVAG00000022746	rpusd1	99	57.947	ENSPTIG00000008545	RPUSD1	91	57.947	Panthera_tigris_altaica
ENSCVAG00000022746	rpusd1	98	55.519	ENSPTRG00000007565	RPUSD1	88	66.957	Pan_troglodytes
ENSCVAG00000022746	rpusd1	98	55.195	ENSPANG00000024401	RPUSD1	98	56.352	Papio_anubis
ENSCVAG00000022746	rpusd1	100	69.408	ENSPKIG00000018890	rpusd1	91	69.408	Paramormyrops_kingsleyae
ENSCVAG00000022746	rpusd1	98	64.145	ENSPSIG00000013945	RPUSD1	99	64.145	Pelodiscus_sinensis
ENSCVAG00000022746	rpusd1	100	74.675	ENSPMGG00000014950	rpusd1	99	75.000	Periophthalmus_magnuspinnatus
ENSCVAG00000022746	rpusd1	98	56.536	ENSPEMG00000000497	Rpusd1	98	56.536	Peromyscus_maniculatus_bairdii
ENSCVAG00000022746	rpusd1	99	52.961	ENSPMAG00000001563	rpusd1	99	53.595	Petromyzon_marinus
ENSCVAG00000022746	rpusd1	98	63.545	ENSPCIG00000021216	-	92	63.545	Phascolarctos_cinereus
ENSCVAG00000022746	rpusd1	100	89.803	ENSPFOG00000007946	rpusd1	100	89.803	Poecilia_formosa
ENSCVAG00000022746	rpusd1	100	89.803	ENSPLAG00000011925	rpusd1	100	89.803	Poecilia_latipinna
ENSCVAG00000022746	rpusd1	100	89.803	ENSPMEG00000002910	rpusd1	100	89.803	Poecilia_mexicana
ENSCVAG00000022746	rpusd1	100	90.789	ENSPREG00000019851	rpusd1	100	90.789	Poecilia_reticulata
ENSCVAG00000022746	rpusd1	98	43.000	ENSPCAG00000002258	RPUSD1	98	43.000	Procavia_capensis
ENSCVAG00000022746	rpusd1	98	54.426	ENSPCOG00000022582	RPUSD1	98	55.229	Propithecus_coquereli
ENSCVAG00000022746	rpusd1	98	51.603	ENSPVAG00000013104	RPUSD1	98	53.420	Pteropus_vampyrus
ENSCVAG00000022746	rpusd1	100	80.064	ENSPNYG00000024076	rpusd1	100	80.064	Pundamilia_nyererei
ENSCVAG00000022746	rpusd1	99	66.997	ENSPNAG00000013806	rpusd1	99	66.997	Pygocentrus_nattereri
ENSCVAG00000022746	rpusd1	98	57.756	ENSRNOG00000023639	Rpusd1	98	57.756	Rattus_norvegicus
ENSCVAG00000022746	rpusd1	98	55.519	ENSRBIG00000030238	RPUSD1	98	56.311	Rhinopithecus_bieti
ENSCVAG00000022746	rpusd1	98	55.519	ENSRROG00000036663	RPUSD1	98	56.311	Rhinopithecus_roxellana
ENSCVAG00000022746	rpusd1	98	56.478	ENSSBOG00000033063	RPUSD1	98	57.667	Saimiri_boliviensis_boliviensis
ENSCVAG00000022746	rpusd1	98	62.207	ENSSHAG00000013500	RPUSD1	98	62.207	Sarcophilus_harrisii
ENSCVAG00000022746	rpusd1	98	71.237	ENSSFOG00015014394	rpusd1	99	71.237	Scleropages_formosus
ENSCVAG00000022746	rpusd1	100	80.259	ENSSMAG00000008045	rpusd1	93	81.553	Scophthalmus_maximus
ENSCVAG00000022746	rpusd1	100	81.877	ENSSDUG00000001829	rpusd1	97	81.877	Seriola_dumerili
ENSCVAG00000022746	rpusd1	100	81.877	ENSSLDG00000020853	rpusd1	97	81.877	Seriola_lalandi_dorsalis
ENSCVAG00000022746	rpusd1	54	72.289	ENSSARG00000011187	-	99	72.289	Sorex_araneus
ENSCVAG00000022746	rpusd1	62	60.000	ENSSPUG00000005119	-	98	60.000	Sphenodon_punctatus
ENSCVAG00000022746	rpusd1	100	84.466	ENSSPAG00000012708	rpusd1	99	84.466	Stegastes_partitus
ENSCVAG00000022746	rpusd1	98	56.721	ENSSSCG00000008000	RPUSD1	98	64.567	Sus_scrofa
ENSCVAG00000022746	rpusd1	82	70.683	ENSTGUG00000015375	RPUSD1	98	70.683	Taeniopygia_guttata
ENSCVAG00000022746	rpusd1	100	74.434	ENSTRUG00000003041	rpusd1	99	77.023	Takifugu_rubripes
ENSCVAG00000022746	rpusd1	99	71.429	ENSTNIG00000002660	rpusd1	99	71.429	Tetraodon_nigroviridis
ENSCVAG00000022746	rpusd1	98	58.632	ENSTTRG00000010167	RPUSD1	98	58.632	Tursiops_truncatus
ENSCVAG00000022746	rpusd1	98	58.667	ENSUAMG00000012736	RPUSD1	98	59.000	Ursus_americanus
ENSCVAG00000022746	rpusd1	98	58.667	ENSUMAG00000021174	RPUSD1	98	59.000	Ursus_maritimus
ENSCVAG00000022746	rpusd1	98	59.000	ENSVVUG00000012357	RPUSD1	98	59.000	Vulpes_vulpes
ENSCVAG00000022746	rpusd1	98	63.333	ENSXETG00000007184	rpusd1	98	63.333	Xenopus_tropicalis
ENSCVAG00000022746	rpusd1	100	89.145	ENSXCOG00000017930	rpusd1	100	89.145	Xiphophorus_couchianus
ENSCVAG00000022746	rpusd1	100	89.145	ENSXMAG00000024084	rpusd1	100	89.145	Xiphophorus_maculatus