EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSCVAG00000022814 (Gene tree)
Gene ID
107086181
Gene Symbol
-
Alias
-
Full Name
RNA-binding motif%2C single-stranded-interacting protein 3
Gene Type
protein_coding
Species
Cyprinodon_variegatus
Status
putative
Strand
Minus strand
Length
270643 bases
Position
chrKL652644.1:1102403-1373045
Accession
107086181
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSCVAP00000019440RRM_1PF00076.221.7e-3112
ENSCVAP00000019440RRM_1PF00076.221.7e-3122
ENSCVAP00000019451RRM_1PF00076.222e-3112
ENSCVAP00000019451RRM_1PF00076.222e-3122
ENSCVAP00000019458RRM_1PF00076.222.6e-3112
ENSCVAP00000019458RRM_1PF00076.222.6e-3122
ENSCVAP00000019439RRM_1PF00076.223.9e-1711
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSCVAT00000028637-1271-ENSCVAP00000019451381 (aa)--
ENSCVAT00000028619-1020-ENSCVAP00000019440339 (aa)--
ENSCVAT00000033145-1245XM_015376965ENSCVAP00000019458414 (aa)XP_015232451-
ENSCVAT00000028610-490-ENSCVAP00000019439163 (aa)--
Gene Model
Click here to download ENSCVAG00000022814's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000022814's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSCVAG00000022814-9983.333ENSCVAG00000022354rbms39981.190
ENSCVAG00000022814-7236.905ENSCVAG00000014060elavl37836.905
ENSCVAG00000022814-5538.806ENSCVAG00000021872pabpc1a5932.632
ENSCVAG00000022814-9670.294ENSCVAG00000013006rbms2b9371.268
ENSCVAG00000022814-5036.066ENSCVAG00000017170elavl1a7035.366
ENSCVAG00000022814-5038.667ENSCVAG00000019080elavl46436.723
ENSCVAG00000022814-9261.076ENSCVAG00000014698rbms1a8960.997
ENSCVAG00000022814-6034.667ENSCVAG00000016617-8035.714
ENSCVAG00000022814-5638.298ENSCVAG00000013913ELAVL26837.879
ENSCVAG00000022814-9178.135ENSCVAG00000001635rbms2a9782.692
ENSCVAG00000022814-5033.750ENSCVAG00000018056celf3a5633.750
ENSCVAG00000022814-6433.750ENSCVAG00000009184celf3b6333.750
ENSCVAG00000022814-9970.349ENSCVAG00000002027RBMS19968.380
ENSCVAG00000022814-5040.789ENSCVAG00000004383-5340.789
ENSCVAG00000022814-5040.789ENSCVAG00000009088-5640.789
ENSCVAG00000022814-6235.000ENSCVAG00000018670si:dkey-205h23.26135.000
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSCVAG00000022814-9690.191ENSG00000144642RBMS310085.227Homo_sapiens
ENSCVAG00000022814-8788.591ENSAPOG00000007266rbms39381.606Acanthochromis_polyacanthus
ENSCVAG00000022814-10099.217ENSAPOG00000003432-10099.041Acanthochromis_polyacanthus
ENSCVAG00000022814-7583.882ENSAMEG00000005947RBMS39983.882Ailuropoda_melanoleuca
ENSCVAG00000022814-9573.770ENSACIG00000021113RBMS39574.317Amphilophus_citrinellus
ENSCVAG00000022814-9198.714ENSACIG00000006987-8798.433Amphilophus_citrinellus
ENSCVAG00000022814-10099.217ENSAOCG00000024104-10091.494Amphiprion_ocellaris
ENSCVAG00000022814-9584.426ENSAOCG00000021274rbms39979.577Amphiprion_ocellaris
ENSCVAG00000022814-9284.259ENSAPEG00000016299rbms39383.286Amphiprion_percula
ENSCVAG00000022814-10090.625ENSAPEG00000009481-10090.625Amphiprion_percula
ENSCVAG00000022814-9584.426ENSATEG00000024295rbms39980.425Anabas_testudineus
ENSCVAG00000022814-10098.956ENSATEG00000008433-10098.801Anabas_testudineus
ENSCVAG00000022814-9986.014ENSAPLG00000012270RBMS39983.683Anas_platyrhynchos
ENSCVAG00000022814-9689.918ENSACAG00000028664RBMS39985.238Anolis_carolinensis
ENSCVAG00000022814-9687.105ENSANAG00000021899RBMS39982.719Aotus_nancymaae
ENSCVAG00000022814-9980.720ENSACLG00000018506rbms39981.234Astatotilapia_calliptera
ENSCVAG00000022814-10098.433ENSACLG00000008976-9489.773Astatotilapia_calliptera
ENSCVAG00000022814-7889.844ENSAMXG00000043770-10086.434Astyanax_mexicanus
ENSCVAG00000022814-9989.880ENSAMXG00000020388rbms39987.952Astyanax_mexicanus
ENSCVAG00000022814-9690.463ENSBTAG00000044062RBMS39985.273Bos_taurus
ENSCVAG00000022814-9687.105ENSCJAG00000004312RBMS39982.488Callithrix_jacchus
ENSCVAG00000022814-9686.423ENSCAFG00000005464RBMS39982.151Canis_familiaris
ENSCVAG00000022814-9686.423ENSCAFG00020024980RBMS39982.151Canis_lupus_dingo
ENSCVAG00000022814-9689.918ENSCHIG00000009144RBMS39984.798Capra_hircus
ENSCVAG00000022814-8385.498ENSTSYG00000002615RBMS39985.498Carlito_syrichta
ENSCVAG00000022814-9683.333ENSCAPG00000017783RBMS39782.677Cavia_aperea
ENSCVAG00000022814-9988.221ENSCPOG00000006457RBMS39985.817Cavia_porcellus
ENSCVAG00000022814-9687.105ENSCCAG00000008671RBMS39982.488Cebus_capucinus
ENSCVAG00000022814-9686.684ENSCATG00000013222RBMS310082.151Cercocebus_atys
ENSCVAG00000022814-9689.646ENSCLAG00000005866RBMS39984.798Chinchilla_lanigera
ENSCVAG00000022814-7087.454ENSCSAG00000009655RBMS39987.454Chlorocebus_sabaeus
ENSCVAG00000022814-8788.000ENSCHOG00000000758RBMS38688.000Choloepus_hoffmanni
ENSCVAG00000022814-9689.918ENSCPBG00000022678RBMS39890.501Chrysemys_picta_bellii
ENSCVAG00000022814-9686.842ENSCANG00000032137RBMS39982.258Colobus_angolensis_palliatus
ENSCVAG00000022814-9985.817ENSCGRG00001007243Rbms39985.577Cricetulus_griseus_chok1gshd
ENSCVAG00000022814-9985.817ENSCGRG00000004599Rbms39985.577Cricetulus_griseus_crigri
ENSCVAG00000022814-9981.647ENSCSEG00000010011RBMS39979.765Cynoglossus_semilaevis
ENSCVAG00000022814-10097.128ENSCSEG00000014677-9499.588Cynoglossus_semilaevis
ENSCVAG00000022814-9989.157ENSDARG00000044574rbms310095.139Danio_rerio
ENSCVAG00000022814-9689.373ENSDNOG00000016645RBMS39684.323Dasypus_novemcinctus
ENSCVAG00000022814-9689.101ENSDORG00000007220Rbms39984.323Dipodomys_ordii
ENSCVAG00000022814-8783.333ENSETEG00000009485-8070.571Echinops_telfairi
ENSCVAG00000022814-8069.000ENSEBUG00000005830rbms38953.846Eptatretus_burgeri
ENSCVAG00000022814-9689.918ENSEASG00005006152RBMS39984.798Equus_asinus_asinus
ENSCVAG00000022814-9689.918ENSECAG00000017871RBMS39984.798Equus_caballus
ENSCVAG00000022814-8783.838ENSEEUG00000014337RBMS310075.819Erinaceus_europaeus
ENSCVAG00000022814-10096.084ENSELUG00000006905-10096.084Esox_lucius
ENSCVAG00000022814-9980.463ENSELUG00000002862rbms39980.463Esox_lucius
ENSCVAG00000022814-9689.646ENSFCAG00000002130RBMS39984.798Felis_catus
ENSCVAG00000022814-9690.463ENSFALG00000009165RBMS39985.714Ficedula_albicollis
ENSCVAG00000022814-9689.101ENSFDAG00000008278RBMS39984.323Fukomys_damarensis
ENSCVAG00000022814-78100.000ENSFHEG00000016746-93100.000Fundulus_heteroclitus
ENSCVAG00000022814-9575.749ENSFHEG00000004787RBMS39475.749Fundulus_heteroclitus
ENSCVAG00000022814-9196.154ENSGMOG00000002600-9789.136Gadus_morhua
ENSCVAG00000022814-9690.463ENSGALG00000011439RBMS39985.714Gallus_gallus
ENSCVAG00000022814-9982.898ENSGAFG00000000168rbms39982.429Gambusia_affinis
ENSCVAG00000022814-10099.476ENSGAFG00000003329-10099.279Gambusia_affinis
ENSCVAG00000022814-6088.119ENSGAGG00000023515-6183.168Gopherus_agassizii
ENSCVAG00000022814-7187.868ENSGAGG00000004039RBMS39987.868Gopherus_agassizii
ENSCVAG00000022814-9687.105ENSGGOG00000007228RBMS39982.488Gorilla_gorilla
ENSCVAG00000022814-10098.433ENSHBUG00000019785-9694.009Haplochromis_burtoni
ENSCVAG00000022814-7878.519ENSHBUG00000021196rbms39482.222Haplochromis_burtoni
ENSCVAG00000022814-9689.646ENSHGLG00000002170RBMS39984.798Heterocephalus_glaber_female
ENSCVAG00000022814-9689.646ENSHGLG00100014278RBMS39984.798Heterocephalus_glaber_male
ENSCVAG00000022814-10097.389ENSHCOG00000007894-10097.122Hippocampus_comes
ENSCVAG00000022814-9989.880ENSIPUG00000017680rbms39987.952Ictalurus_punctatus
ENSCVAG00000022814-9689.946ENSSTOG00000006324RBMS39985.273Ictidomys_tridecemlineatus
ENSCVAG00000022814-9687.738ENSJJAG00000014708Rbms39981.473Jaculus_jaculus
ENSCVAG00000022814-9583.651ENSKMAG00000020500rbms39978.505Kryptolebias_marmoratus
ENSCVAG00000022814-10098.433ENSKMAG00000012586-10098.321Kryptolebias_marmoratus
ENSCVAG00000022814-6674.717ENSLBEG00000006677rbms39774.717Labrus_bergylta
ENSCVAG00000022814-10097.650ENSLBEG00000027388-10097.602Labrus_bergylta
ENSCVAG00000022814-9691.826ENSLACG00000010581RBMS39987.112Latimeria_chalumnae
ENSCVAG00000022814-7691.724ENSLOCG00000002328rbms39991.724Lepisosteus_oculatus
ENSCVAG00000022814-9686.162ENSLAFG00000000354RBMS39981.922Loxodonta_africana
ENSCVAG00000022814-9689.918ENSMFAG00000033300RBMS39984.798Macaca_fascicularis
ENSCVAG00000022814-9689.918ENSMMUG00000004404RBMS39984.798Macaca_mulatta
ENSCVAG00000022814-9686.842ENSMNEG00000035839RBMS39984.615Macaca_nemestrina
ENSCVAG00000022814-9686.684ENSMLEG00000029464RBMS310082.151Mandrillus_leucophaeus
ENSCVAG00000022814-10098.433ENSMAMG00000002176-8798.214Mastacembelus_armatus
ENSCVAG00000022814-9584.973ENSMAMG00000024043rbms39980.706Mastacembelus_armatus
ENSCVAG00000022814-10098.433ENSMZEG00005026469-9695.561Maylandia_zebra
ENSCVAG00000022814-9979.669ENSMZEG00005006308rbms39980.142Maylandia_zebra
ENSCVAG00000022814-9985.817ENSMAUG00000016436Rbms39985.577Mesocricetus_auratus
ENSCVAG00000022814-9687.105ENSMICG00000049249RBMS39982.488Microcebus_murinus
ENSCVAG00000022814-9686.649ENSMOCG00000006997Rbms39985.337Microtus_ochrogaster
ENSCVAG00000022814-10096.882ENSMMOG00000015071-10096.882Mola_mola
ENSCVAG00000022814-9185.312ENSMMOG00000008471RBMS39584.330Mola_mola
ENSCVAG00000022814-9191.262ENSMODG00000015125RBMS39979.733Monodelphis_domestica
ENSCVAG00000022814-10098.433ENSMALG00000009155-10098.082Monopterus_albus
ENSCVAG00000022814-9982.311ENSMALG00000019536RBMS39982.783Monopterus_albus
ENSCVAG00000022814-9984.856MGP_CAROLIEiJ_G0032783Rbms310090.777Mus_caroli
ENSCVAG00000022814-9985.577ENSMUSG00000039607Rbms310092.233Mus_musculus
ENSCVAG00000022814-9985.372MGP_PahariEiJ_G0015650Rbms310092.233Mus_pahari
ENSCVAG00000022814-9985.577MGP_SPRETEiJ_G0033930Rbms310092.233Mus_spretus
ENSCVAG00000022814-9686.423ENSMPUG00000011956RBMS39982.151Mustela_putorius_furo
ENSCVAG00000022814-9689.918ENSMLUG00000000659RBMS39985.036Myotis_lucifugus
ENSCVAG00000022814-9987.740ENSNGAG00000014039Rbms39985.337Nannospalax_galili
ENSCVAG00000022814-10098.172ENSNBRG00000018065-10098.082Neolamprologus_brichardi
ENSCVAG00000022814-9687.105ENSNLEG00000004129RBMS39982.488Nomascus_leucogenys
ENSCVAG00000022814-9679.373ENSMEUG00000004772RBMS39975.342Notamacropus_eugenii
ENSCVAG00000022814-9686.544ENSOPRG00000006808RBMS38581.986Ochotona_princeps
ENSCVAG00000022814-9689.918ENSODEG00000003651RBMS39985.036Octodon_degus
ENSCVAG00000022814-9583.607ENSONIG00000007172rbms39381.654Oreochromis_niloticus
ENSCVAG00000022814-9686.807ENSOANG00000010529RBMS39982.910Ornithorhynchus_anatinus
ENSCVAG00000022814-9685.901ENSOCUG00000004840RBMS39981.236Oryctolagus_cuniculus
ENSCVAG00000022814-9978.860ENSORLG00000005370RBMS39978.860Oryzias_latipes
ENSCVAG00000022814-10097.389ENSORLG00000002306-10097.362Oryzias_latipes
ENSCVAG00000022814-9978.622ENSORLG00020022674RBMS39978.622Oryzias_latipes_hni
ENSCVAG00000022814-10097.650ENSORLG00020008496-10097.602Oryzias_latipes_hni
ENSCVAG00000022814-9583.060ENSORLG00015005509rbms39979.335Oryzias_latipes_hsok
ENSCVAG00000022814-10097.650ENSORLG00015015719-10097.602Oryzias_latipes_hsok
ENSCVAG00000022814-10097.389ENSOMEG00000007677-10097.389Oryzias_melastigma
ENSCVAG00000022814-9981.137ENSOMEG00000014805RBMS39981.137Oryzias_melastigma
ENSCVAG00000022814-9685.640ENSOARG00000014684RBMS39981.236Ovis_aries
ENSCVAG00000022814-9687.105ENSPPAG00000036519RBMS39982.488Pan_paniscus
ENSCVAG00000022814-9984.562ENSPPRG00000002761RBMS39982.028Panthera_pardus
ENSCVAG00000022814-9987.173ENSPTIG00000011568RBMS39984.561Panthera_tigris_altaica
ENSCVAG00000022814-9690.191ENSPTRG00000014709RBMS39985.036Pan_troglodytes
ENSCVAG00000022814-9686.684ENSPANG00000010234RBMS310082.151Papio_anubis
ENSCVAG00000022814-7893.750ENSPKIG00000007989-10088.372Paramormyrops_kingsleyae
ENSCVAG00000022814-7892.188ENSPKIG00000016025-8679.842Paramormyrops_kingsleyae
ENSCVAG00000022814-9689.646ENSPSIG00000005269RBMS39985.000Pelodiscus_sinensis
ENSCVAG00000022814-9680.952ENSPMGG00000021544rbms39183.381Periophthalmus_magnuspinnatus
ENSCVAG00000022814-10098.429ENSPMGG00000021683-10098.429Periophthalmus_magnuspinnatus
ENSCVAG00000022814-9982.892ENSPEMG00000001117Rbms39980.482Peromyscus_maniculatus_bairdii
ENSCVAG00000022814-8793.266ENSPCIG00000006106RBMS38786.040Phascolarctos_cinereus
ENSCVAG00000022814-9983.135ENSPFOG00000017887rbms39980.760Poecilia_formosa
ENSCVAG00000022814-8381.308ENSPLAG00000016866-8281.308Poecilia_latipinna
ENSCVAG00000022814-5884.848ENSPLAG00000002862-7375.214Poecilia_latipinna
ENSCVAG00000022814-78100.000ENSPLAG00000005161-77100.000Poecilia_latipinna
ENSCVAG00000022814-10099.738ENSPMEG00000002993-10099.279Poecilia_mexicana
ENSCVAG00000022814-5884.848ENSPMEG00000013853-8084.848Poecilia_mexicana
ENSCVAG00000022814-10081.280ENSPREG00000011880rbms310082.464Poecilia_reticulata
ENSCVAG00000022814-10099.738ENSPREG00000018221-9796.825Poecilia_reticulata
ENSCVAG00000022814-9969.108ENSPPYG00000014050RBMS38268.879Pongo_abelii
ENSCVAG00000022814-9963.158ENSPCAG00000006307RBMS39962.929Procavia_capensis
ENSCVAG00000022814-9687.368ENSPCOG00000017136RBMS39982.719Propithecus_coquereli
ENSCVAG00000022814-8988.000ENSPVAG00000014037RBMS39975.744Pteropus_vampyrus
ENSCVAG00000022814-9979.433ENSPNYG00000010546rbms39979.905Pundamilia_nyererei
ENSCVAG00000022814-10098.433ENSPNYG00000012624-10098.321Pundamilia_nyererei
ENSCVAG00000022814-9989.880ENSPNAG00000001800rbms39987.952Pygocentrus_nattereri
ENSCVAG00000022814-6784.821ENSPNAG00000026763-7791.379Pygocentrus_nattereri
ENSCVAG00000022814-9985.817ENSRNOG00000025881Rbms39983.413Rattus_norvegicus
ENSCVAG00000022814-9686.579ENSRBIG00000035863RBMS39982.028Rhinopithecus_bieti
ENSCVAG00000022814-9686.579ENSRROG00000027512RBMS39785.000Rhinopithecus_roxellana
ENSCVAG00000022814-9687.105ENSSBOG00000020232RBMS39982.488Saimiri_boliviensis_boliviensis
ENSCVAG00000022814-8892.333ENSSHAG00000002411RBMS39981.701Sarcophilus_harrisii
ENSCVAG00000022814-10094.778ENSSFOG00015008578rbms310094.778Scleropages_formosus
ENSCVAG00000022814-9582.240ENSSMAG00000004997rbms39982.787Scophthalmus_maximus
ENSCVAG00000022814-9298.397ENSSMAG00000020065-9792.954Scophthalmus_maximus
ENSCVAG00000022814-9981.882ENSSDUG00000013656RBMS39980.000Seriola_dumerili
ENSCVAG00000022814-10099.217ENSSDUG00000019287-10099.041Seriola_dumerili
ENSCVAG00000022814-10099.217ENSSLDG00000013224-10099.041Seriola_lalandi_dorsalis
ENSCVAG00000022814-9981.542ENSSLDG00000020276RBMS39979.673Seriola_lalandi_dorsalis
ENSCVAG00000022814-8777.778ENSSARG00000000695RBMS39873.554Sorex_araneus
ENSCVAG00000022814-7586.689ENSSPUG00000017197RBMS39785.570Sphenodon_punctatus
ENSCVAG00000022814-10099.217ENSSPAG00000003983-10088.073Stegastes_partitus
ENSCVAG00000022814-9584.153ENSSPAG00000020693rbms39883.193Stegastes_partitus
ENSCVAG00000022814-9689.646ENSSSCG00000036381RBMS39984.561Sus_scrofa
ENSCVAG00000022814-8386.061ENSTGUG00000003572RBMS39985.455Taeniopygia_guttata
ENSCVAG00000022814-9682.561ENSTRUG00000021719RBMS39978.118Takifugu_rubripes
ENSCVAG00000022814-10086.698ENSTRUG00000007482-10087.081Takifugu_rubripes
ENSCVAG00000022814-8793.243ENSTBEG00000005362RBMS39885.950Tupaia_belangeri
ENSCVAG00000022814-9685.640ENSTTRG00000006202RBMS39981.236Tursiops_truncatus
ENSCVAG00000022814-9686.423ENSUMAG00000000263RBMS39982.151Ursus_maritimus
ENSCVAG00000022814-9576.178ENSVPAG00000003842RBMS39774.938Vicugna_pacos
ENSCVAG00000022814-9686.423ENSVVUG00000004660RBMS39990.870Vulpes_vulpes
ENSCVAG00000022814-7681.908ENSXETG00000032055RBMS39881.908Xenopus_tropicalis
ENSCVAG00000022814-10083.763ENSXCOG00000019600-10083.763Xiphophorus_couchianus
ENSCVAG00000022814-10099.738ENSXMAG00000014382-10099.519Xiphophorus_maculatus
ENSCVAG00000022814-9981.043ENSXMAG00000021783rbms39980.806Xiphophorus_maculatus

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