EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCVAG00000023000 (Gene tree)
Gene ID: -
Gene Symbol: si:ch211-275j6.5
Alias: gb:ct586343
Full Name: si:ch211-275j6.5
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Minus strand
Length: 2651 bases
Position: chrKL652678.1:823977-826627
Accession: ZDB-GENE-130109-1
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000019633	RF-1	PF00472.20	2.9e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000028851	-	665	-	ENSCVAP00000019633	170 (aa)	-	-

Gene Model

Click here to download ENSCVAG00000023000's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000023000's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000023000	si:ch211-275j6.5	69	62.712	ENSG00000130921	C12orf65	77	62.500	Homo_sapiens
ENSCVAG00000023000	si:ch211-275j6.5	94	70.552	ENSAPOG00000000995	si:ch211-275j6.5	96	70.552	Acanthochromis_polyacanthus
ENSCVAG00000023000	si:ch211-275j6.5	95	70.122	ENSACIG00000001644	si:ch211-275j6.5	100	70.122	Amphilophus_citrinellus
ENSCVAG00000023000	si:ch211-275j6.5	92	73.418	ENSAOCG00000005589	si:ch211-275j6.5	97	73.418	Amphiprion_ocellaris
ENSCVAG00000023000	si:ch211-275j6.5	100	69.767	ENSAPEG00000024618	si:ch211-275j6.5	100	69.767	Amphiprion_percula
ENSCVAG00000023000	si:ch211-275j6.5	99	64.912	ENSATEG00000011661	si:ch211-275j6.5	89	64.912	Anabas_testudineus
ENSCVAG00000023000	si:ch211-275j6.5	71	65.833	ENSAPLG00000016073	C12orf65	100	65.833	Anas_platyrhynchos
ENSCVAG00000023000	si:ch211-275j6.5	82	62.857	ENSACAG00000015561	C12orf65	71	62.857	Anolis_carolinensis
ENSCVAG00000023000	si:ch211-275j6.5	62	63.810	ENSANAG00000022881	C12orf65	78	60.448	Aotus_nancymaae
ENSCVAG00000023000	si:ch211-275j6.5	100	70.690	ENSACLG00000023906	si:ch211-275j6.5	100	70.690	Astatotilapia_calliptera
ENSCVAG00000023000	si:ch211-275j6.5	75	68.504	ENSAMXG00000031765	si:ch211-275j6.5	82	66.901	Astyanax_mexicanus
ENSCVAG00000023000	si:ch211-275j6.5	80	59.124	ENSBTAG00000020503	C17H12orf65	80	59.124	Bos_taurus
ENSCVAG00000023000	si:ch211-275j6.5	51	71.264	ENSCJAG00000016579	C12orf65	71	65.517	Callithrix_jacchus
ENSCVAG00000023000	si:ch211-275j6.5	58	68.000	ENSCAFG00000007512	C26H12orf65	58	59.420	Canis_familiaris
ENSCVAG00000023000	si:ch211-275j6.5	58	68.000	ENSCAFG00020016169	C12orf65	83	59.420	Canis_lupus_dingo
ENSCVAG00000023000	si:ch211-275j6.5	86	59.732	ENSCHIG00000022229	C12orf65	82	59.333	Capra_hircus
ENSCVAG00000023000	si:ch211-275j6.5	61	65.049	ENSCAPG00000014691	C12orf65	69	62.500	Cavia_aperea
ENSCVAG00000023000	si:ch211-275j6.5	59	64.356	ENSCPOG00000007583	C12orf65	68	61.905	Cavia_porcellus
ENSCVAG00000023000	si:ch211-275j6.5	64	65.741	ENSCATG00000040685	C12orf65	84	58.696	Cercocebus_atys
ENSCVAG00000023000	si:ch211-275j6.5	56	62.500	ENSCLAG00000014329	C12orf65	65	60.331	Chinchilla_lanigera
ENSCVAG00000023000	si:ch211-275j6.5	64	65.741	ENSCSAG00000002068	C12orf65	82	58.696	Chlorocebus_sabaeus
ENSCVAG00000023000	si:ch211-275j6.5	71	60.833	ENSCPBG00000025970	C12orf65	73	61.345	Chrysemys_picta_bellii
ENSCVAG00000023000	si:ch211-275j6.5	57	64.646	ENSCGRG00001013424	2810006K23Rik	77	57.857	Cricetulus_griseus_chok1gshd
ENSCVAG00000023000	si:ch211-275j6.5	57	64.646	ENSCGRG00000003037	2810006K23Rik	77	57.857	Cricetulus_griseus_crigri
ENSCVAG00000023000	si:ch211-275j6.5	94	62.577	ENSCSEG00000014536	si:ch211-275j6.5	98	61.677	Cynoglossus_semilaevis
ENSCVAG00000023000	si:ch211-275j6.5	98	60.843	ENSDARG00000097803	si:ch211-275j6.5	94	70.370	Danio_rerio
ENSCVAG00000023000	si:ch211-275j6.5	55	61.290	ENSDNOG00000034728	C12orf65	75	53.600	Dasypus_novemcinctus
ENSCVAG00000023000	si:ch211-275j6.5	71	60.800	ENSDORG00000026069	2810006K23Rik	93	54.268	Dipodomys_ordii
ENSCVAG00000023000	si:ch211-275j6.5	72	45.082	FBgn0050100	CG30100	59	52.874	Drosophila_melanogaster
ENSCVAG00000023000	si:ch211-275j6.5	50	69.412	ENSETEG00000005627	C12orf65	73	62.393	Echinops_telfairi
ENSCVAG00000023000	si:ch211-275j6.5	58	67.000	ENSEASG00005012587	C12orf65	93	56.250	Equus_asinus_asinus
ENSCVAG00000023000	si:ch211-275j6.5	58	67.000	ENSECAG00000001057	C8H12orf65	93	56.250	Equus_caballus
ENSCVAG00000023000	si:ch211-275j6.5	71	57.851	ENSEEUG00000007231	C12orf65	94	52.201	Erinaceus_europaeus
ENSCVAG00000023000	si:ch211-275j6.5	72	71.545	ENSELUG00000015178	lg13h12orf65	74	71.545	Esox_lucius
ENSCVAG00000023000	si:ch211-275j6.5	59	63.107	ENSFCAG00000015328	C12orf65	84	56.028	Felis_catus
ENSCVAG00000023000	si:ch211-275j6.5	76	57.042	ENSFALG00000009261	C12orf65	62	70.000	Ficedula_albicollis
ENSCVAG00000023000	si:ch211-275j6.5	100	79.191	ENSFHEG00000017567	si:ch211-275j6.5	100	79.191	Fundulus_heteroclitus
ENSCVAG00000023000	si:ch211-275j6.5	74	75.397	ENSGMOG00000012139	si:ch211-275j6.5	84	76.000	Gadus_morhua
ENSCVAG00000023000	si:ch211-275j6.5	85	57.895	ENSGALG00000029390	C15H12ORF65	93	57.895	Gallus_gallus
ENSCVAG00000023000	si:ch211-275j6.5	87	70.861	ENSGACG00000008255	si:ch211-275j6.5	95	70.861	Gasterosteus_aculeatus
ENSCVAG00000023000	si:ch211-275j6.5	54	67.391	ENSGAGG00000000823	C12orf65	73	64.815	Gopherus_agassizii
ENSCVAG00000023000	si:ch211-275j6.5	69	62.712	ENSGGOG00000012850	C12orf65	81	57.857	Gorilla_gorilla
ENSCVAG00000023000	si:ch211-275j6.5	100	70.690	ENSHBUG00000007273	si:ch211-275j6.5	100	70.690	Haplochromis_burtoni
ENSCVAG00000023000	si:ch211-275j6.5	54	65.934	ENSHGLG00000010966	C12orf65	65	61.983	Heterocephalus_glaber_female
ENSCVAG00000023000	si:ch211-275j6.5	54	65.934	ENSHGLG00100018631	C12orf65	65	61.983	Heterocephalus_glaber_male
ENSCVAG00000023000	si:ch211-275j6.5	79	72.464	ENSHCOG00000019848	si:ch211-275j6.5	81	72.464	Hippocampus_comes
ENSCVAG00000023000	si:ch211-275j6.5	89	62.987	ENSIPUG00000020793	si:ch211-275j6.5	94	62.987	Ictalurus_punctatus
ENSCVAG00000023000	si:ch211-275j6.5	64	63.889	ENSSTOG00000016463	C12orf65	70	61.983	Ictidomys_tridecemlineatus
ENSCVAG00000023000	si:ch211-275j6.5	86	49.660	ENSJJAG00000023360	2810006K23Rik	76	49.660	Jaculus_jaculus
ENSCVAG00000023000	si:ch211-275j6.5	93	75.155	ENSKMAG00000018733	si:ch211-275j6.5	100	75.155	Kryptolebias_marmoratus
ENSCVAG00000023000	si:ch211-275j6.5	75	62.992	ENSLACG00000017355	C12orf65	77	62.992	Latimeria_chalumnae
ENSCVAG00000023000	si:ch211-275j6.5	71	66.942	ENSLOCG00000005702	si:ch211-275j6.5	100	66.942	Lepisosteus_oculatus
ENSCVAG00000023000	si:ch211-275j6.5	74	61.111	ENSLAFG00000002134	C12orf65	76	61.111	Loxodonta_africana
ENSCVAG00000023000	si:ch211-275j6.5	64	65.741	ENSMMUG00000031495	C12orf65	84	58.696	Macaca_mulatta
ENSCVAG00000023000	si:ch211-275j6.5	54	70.330	ENSMNEG00000044673	C12orf65	82	57.971	Macaca_nemestrina
ENSCVAG00000023000	si:ch211-275j6.5	64	65.741	ENSMLEG00000044309	C12orf65	84	58.696	Mandrillus_leucophaeus
ENSCVAG00000023000	si:ch211-275j6.5	100	69.364	ENSMAMG00000017366	si:ch211-275j6.5	100	69.364	Mastacembelus_armatus
ENSCVAG00000023000	si:ch211-275j6.5	100	70.690	ENSMZEG00005000938	si:ch211-275j6.5	99	70.690	Maylandia_zebra
ENSCVAG00000023000	si:ch211-275j6.5	86	54.375	ENSMGAG00000003354	C12orf65	74	70.000	Meleagris_gallopavo
ENSCVAG00000023000	si:ch211-275j6.5	54	65.957	ENSMAUG00000010304	2810006K23Rik	75	65.957	Mesocricetus_auratus
ENSCVAG00000023000	si:ch211-275j6.5	54	68.478	ENSMICG00000037138	C12orf65	81	57.143	Microcebus_murinus
ENSCVAG00000023000	si:ch211-275j6.5	62	62.617	ENSMOCG00000017477	2810006K23Rik	80	56.000	Microtus_ochrogaster
ENSCVAG00000023000	si:ch211-275j6.5	100	70.175	ENSMMOG00000017134	si:ch211-275j6.5	100	70.175	Mola_mola
ENSCVAG00000023000	si:ch211-275j6.5	70	57.983	ENSMODG00000012450	C12orf65	58	62.000	Monodelphis_domestica
ENSCVAG00000023000	si:ch211-275j6.5	100	70.520	ENSMALG00000012291	si:ch211-275j6.5	100	71.676	Monopterus_albus
ENSCVAG00000023000	si:ch211-275j6.5	59	64.078	MGP_CAROLIEiJ_G0027747	2810006K23Rik	78	58.042	Mus_caroli
ENSCVAG00000023000	si:ch211-275j6.5	59	64.078	ENSMUSG00000047635	2810006K23Rik	90	52.381	Mus_musculus
ENSCVAG00000023000	si:ch211-275j6.5	59	63.107	MGP_SPRETEiJ_G0028745	2810006K23Rik	90	51.786	Mus_spretus
ENSCVAG00000023000	si:ch211-275j6.5	62	65.714	ENSMPUG00000001679	C12orf65	71	60.800	Mustela_putorius_furo
ENSCVAG00000023000	si:ch211-275j6.5	69	58.974	ENSMLUG00000007001	C12orf65	80	55.639	Myotis_lucifugus
ENSCVAG00000023000	si:ch211-275j6.5	95	52.695	ENSNGAG00000010625	2810006K23Rik	93	52.695	Nannospalax_galili
ENSCVAG00000023000	si:ch211-275j6.5	100	70.115	ENSNBRG00000008082	si:ch211-275j6.5	100	70.115	Neolamprologus_brichardi
ENSCVAG00000023000	si:ch211-275j6.5	69	62.712	ENSNLEG00000001470	C12orf65	81	57.857	Nomascus_leucogenys
ENSCVAG00000023000	si:ch211-275j6.5	68	61.739	ENSMEUG00000009430	C12orf65	61	66.316	Notamacropus_eugenii
ENSCVAG00000023000	si:ch211-275j6.5	78	56.061	ENSOPRG00000011029	C12orf65	83	56.061	Ochotona_princeps
ENSCVAG00000023000	si:ch211-275j6.5	74	58.730	ENSODEG00000011382	-	72	58.730	Octodon_degus
ENSCVAG00000023000	si:ch211-275j6.5	77	82.443	ENSONIG00000013298	si:ch211-275j6.5	78	82.443	Oreochromis_niloticus
ENSCVAG00000023000	si:ch211-275j6.5	66	64.602	ENSOANG00000012866	C12orf65	68	62.712	Ornithorhynchus_anatinus
ENSCVAG00000023000	si:ch211-275j6.5	82	54.286	ENSOCUG00000011888	C12orf65	93	54.286	Oryctolagus_cuniculus
ENSCVAG00000023000	si:ch211-275j6.5	92	71.975	ENSORLG00000006153	si:ch211-275j6.5	88	71.975	Oryzias_latipes
ENSCVAG00000023000	si:ch211-275j6.5	92	72.611	ENSORLG00020017188	si:ch211-275j6.5	88	72.611	Oryzias_latipes_hni
ENSCVAG00000023000	si:ch211-275j6.5	92	71.975	ENSORLG00015005780	c9h12orf65	88	71.975	Oryzias_latipes_hsok
ENSCVAG00000023000	si:ch211-275j6.5	96	68.452	ENSOMEG00000001663	si:ch211-275j6.5	98	68.452	Oryzias_melastigma
ENSCVAG00000023000	si:ch211-275j6.5	62	59.434	ENSOGAG00000010778	C12orf65	79	57.463	Otolemur_garnettii
ENSCVAG00000023000	si:ch211-275j6.5	86	58.389	ENSOARG00000005214	C12orf65	86	58.000	Ovis_aries
ENSCVAG00000023000	si:ch211-275j6.5	69	62.712	ENSPPAG00000029654	C12orf65	81	57.857	Pan_paniscus
ENSCVAG00000023000	si:ch211-275j6.5	81	58.156	ENSPPRG00000024772	C12orf65	84	57.447	Panthera_pardus
ENSCVAG00000023000	si:ch211-275j6.5	81	58.156	ENSPTIG00000011744	C12orf65	84	57.447	Panthera_tigris_altaica
ENSCVAG00000023000	si:ch211-275j6.5	69	62.712	ENSPTRG00000005595	C12H12orf65	81	57.857	Pan_troglodytes
ENSCVAG00000023000	si:ch211-275j6.5	64	65.741	ENSPANG00000015388	C12orf65	84	58.696	Papio_anubis
ENSCVAG00000023000	si:ch211-275j6.5	80	65.942	ENSPKIG00000001571	si:ch211-275j6.5	82	65.942	Paramormyrops_kingsleyae
ENSCVAG00000023000	si:ch211-275j6.5	78	57.895	ENSPSIG00000013010	C12orf65	73	57.895	Pelodiscus_sinensis
ENSCVAG00000023000	si:ch211-275j6.5	92	65.839	ENSPMGG00000018342	si:ch211-275j6.5	95	65.839	Periophthalmus_magnuspinnatus
ENSCVAG00000023000	si:ch211-275j6.5	59	59.000	ENSPMAG00000000514	si:ch211-275j6.5	85	58.511	Petromyzon_marinus
ENSCVAG00000023000	si:ch211-275j6.5	71	58.333	ENSPCIG00000010996	C12orf65	58	61.386	Phascolarctos_cinereus
ENSCVAG00000023000	si:ch211-275j6.5	99	78.947	ENSPLAG00000001661	si:ch211-275j6.5	99	78.947	Poecilia_latipinna
ENSCVAG00000023000	si:ch211-275j6.5	99	77.907	ENSPMEG00000018566	si:ch211-275j6.5	100	77.907	Poecilia_mexicana
ENSCVAG00000023000	si:ch211-275j6.5	99	77.907	ENSPMEG00000009201	si:ch211-275j6.5	100	77.907	Poecilia_mexicana
ENSCVAG00000023000	si:ch211-275j6.5	99	76.608	ENSPREG00000021268	si:ch211-275j6.5	99	78.947	Poecilia_reticulata
ENSCVAG00000023000	si:ch211-275j6.5	69	62.712	ENSPPYG00000005082	C12orf65	81	57.857	Pongo_abelii
ENSCVAG00000023000	si:ch211-275j6.5	59	58.929	ENSPCAG00000016193	C12orf65	88	54.795	Procavia_capensis
ENSCVAG00000023000	si:ch211-275j6.5	60	64.706	ENSPCOG00000021574	C12orf65	75	57.857	Propithecus_coquereli
ENSCVAG00000023000	si:ch211-275j6.5	81	57.857	ENSPVAG00000015301	C12orf65	84	57.857	Pteropus_vampyrus
ENSCVAG00000023000	si:ch211-275j6.5	100	70.690	ENSPNYG00000014456	si:ch211-275j6.5	100	70.690	Pundamilia_nyererei
ENSCVAG00000023000	si:ch211-275j6.5	94	61.250	ENSPNAG00000019769	si:ch211-275j6.5	89	62.581	Pygocentrus_nattereri
ENSCVAG00000023000	si:ch211-275j6.5	59	63.107	ENSRNOG00000001073	RGD1563482	81	57.143	Rattus_norvegicus
ENSCVAG00000023000	si:ch211-275j6.5	61	67.308	ENSRBIG00000040789	C12orf65	76	61.111	Rhinopithecus_bieti
ENSCVAG00000023000	si:ch211-275j6.5	61	66.346	ENSRROG00000031384	C12orf65	75	60.317	Rhinopithecus_roxellana
ENSCVAG00000023000	si:ch211-275j6.5	62	64.762	ENSSBOG00000026629	C12orf65	82	56.164	Saimiri_boliviensis_boliviensis
ENSCVAG00000023000	si:ch211-275j6.5	91	61.111	ENSSFOG00015019122	si:ch211-275j6.5	93	61.111	Scleropages_formosus
ENSCVAG00000023000	si:ch211-275j6.5	96	69.880	ENSSMAG00000016770	si:ch211-275j6.5	98	69.880	Scophthalmus_maximus
ENSCVAG00000023000	si:ch211-275j6.5	77	79.389	ENSSDUG00000020401	si:ch211-275j6.5	81	79.389	Seriola_dumerili
ENSCVAG00000023000	si:ch211-275j6.5	100	66.474	ENSSLDG00000017638	si:ch211-275j6.5	100	66.474	Seriola_lalandi_dorsalis
ENSCVAG00000023000	si:ch211-275j6.5	70	64.706	ENSSPUG00000012613	C12orf65	73	64.706	Sphenodon_punctatus
ENSCVAG00000023000	si:ch211-275j6.5	100	67.630	ENSSPAG00000023476	si:ch211-275j6.5	100	67.630	Stegastes_partitus
ENSCVAG00000023000	si:ch211-275j6.5	66	61.345	ENSSSCG00000009774	C12orf65	80	61.345	Sus_scrofa
ENSCVAG00000023000	si:ch211-275j6.5	72	62.295	ENSTGUG00000005440	C12orf65	78	68.000	Taeniopygia_guttata
ENSCVAG00000023000	si:ch211-275j6.5	100	68.208	ENSTNIG00000015832	si:ch211-275j6.5	100	68.208	Tetraodon_nigroviridis
ENSCVAG00000023000	si:ch211-275j6.5	52	71.591	ENSTBEG00000012500	C12orf65	76	62.698	Tupaia_belangeri
ENSCVAG00000023000	si:ch211-275j6.5	80	57.857	ENSTTRG00000015880	C12orf65	86	57.718	Tursiops_truncatus
ENSCVAG00000023000	si:ch211-275j6.5	56	67.708	ENSUAMG00000019669	C12orf65	81	59.701	Ursus_americanus
ENSCVAG00000023000	si:ch211-275j6.5	56	67.708	ENSUMAG00000004025	C12orf65	81	59.701	Ursus_maritimus
ENSCVAG00000023000	si:ch211-275j6.5	57	67.677	ENSVVUG00000027811	C12orf65	83	58.696	Vulpes_vulpes
ENSCVAG00000023000	si:ch211-275j6.5	99	78.947	ENSXCOG00000000975	si:ch211-275j6.5	99	78.947	Xiphophorus_couchianus