EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCVAG00000023049 (Gene tree)
Gene ID: 107089624
Gene Symbol: polr3a
Alias: fb81e09|im:7139382|wu:fb81e09
Full Name: RNA polymerase III subunit A
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Minus strand
Length: 39563 bases
Position: chrKL652512.1:665586-705148
Accession: 107089624
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000019541	RNA_pol_Rpb1_5	PF04998.17	3.8e-88	1	1
ENSCVAP00000019560	RNA_pol_Rpb1_5	PF04998.17	4.3e-88	1	1
ENSCVAP00000019560	RNA_pol_Rpb1_4	PF05000.17	1.1e-31	1	1
ENSCVAP00000019541	RNA_pol_Rpb1_4	PF05000.17	1.1e-31	1	1
ENSCVAP00000019541	RNA_pol_Rpb1_2	PF00623.20	5.8e-73	1	1
ENSCVAP00000019560	RNA_pol_Rpb1_2	PF00623.20	5.8e-73	1	1
ENSCVAP00000019560	RNA_pol_Rpb1_3	PF04983.18	2e-40	1	1
ENSCVAP00000019541	RNA_pol_Rpb1_3	PF04983.18	2e-40	1	1
ENSCVAP00000019560	RNA_pol_Rpb1_1	PF04997.12	1.2e-93	1	1
ENSCVAP00000019541	RNA_pol_Rpb1_1	PF04997.12	1.3e-93	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000028760	-	4914	XM_015382519	ENSCVAP00000019560	1402 (aa)	XP_015238005	UPI00074296D9
ENSCVAT00000028779	-	4878	XM_015382528	ENSCVAP00000019541	1390 (aa)	XP_015238014	UPI0007429CF9

Gene Model

Click here to download ENSCVAG00000023049's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000023049's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCVAG00000023049	polr3a	71	32.836	ENSCVAG00000020941	polr1a	64	32.516
ENSCVAG00000023049	polr3a	91	37.569	ENSCVAG00000005156	polr2a	66	37.569

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000023049	polr3a	100	89.568	ENSG00000148606	POLR3A	98	92.405	Homo_sapiens
ENSCVAG00000023049	polr3a	62	92.567	ENSAPOG00000022727	polr3a	99	92.567	Acanthochromis_polyacanthus
ENSCVAG00000023049	polr3a	100	89.304	ENSAMEG00000017801	POLR3A	100	89.304	Ailuropoda_melanoleuca
ENSCVAG00000023049	polr3a	94	96.000	ENSACIG00000024504	polr3a	97	96.000	Amphilophus_citrinellus
ENSCVAG00000023049	polr3a	100	92.230	ENSAOCG00000003949	-	100	92.230	Amphiprion_ocellaris
ENSCVAG00000023049	polr3a	100	95.612	ENSAOCG00000002071	polr3a	100	95.612	Amphiprion_ocellaris
ENSCVAG00000023049	polr3a	100	95.612	ENSAPEG00000013351	polr3a	100	95.612	Amphiprion_percula
ENSCVAG00000023049	polr3a	100	95.396	ENSAPEG00000001966	-	100	95.396	Amphiprion_percula
ENSCVAG00000023049	polr3a	100	95.683	ENSATEG00000023277	polr3a	100	95.683	Anabas_testudineus
ENSCVAG00000023049	polr3a	99	90.036	ENSAPLG00000015878	POLR3A	99	90.036	Anas_platyrhynchos
ENSCVAG00000023049	polr3a	93	89.534	ENSACAG00000007985	POLR3A	99	89.534	Anolis_carolinensis
ENSCVAG00000023049	polr3a	100	86.997	ENSANAG00000028922	POLR3A	96	92.994	Aotus_nancymaae
ENSCVAG00000023049	polr3a	100	95.755	ENSACLG00000005914	polr3a	100	95.755	Astatotilapia_calliptera
ENSCVAG00000023049	polr3a	99	89.553	ENSAMXG00000018852	polr3a	99	89.553	Astyanax_mexicanus
ENSCVAG00000023049	polr3a	100	89.712	ENSBTAG00000013259	POLR3A	100	89.712	Bos_taurus
ENSCVAG00000023049	polr3a	98	57.071	WBGene00004411	rpc-1	99	57.071	Caenorhabditis_elegans
ENSCVAG00000023049	polr3a	100	89.424	ENSCJAG00000001015	POLR3A	100	89.424	Callithrix_jacchus
ENSCVAG00000023049	polr3a	100	89.496	ENSCAFG00000015546	POLR3A	100	89.496	Canis_familiaris
ENSCVAG00000023049	polr3a	100	89.496	ENSCAFG00020014711	POLR3A	100	89.496	Canis_lupus_dingo
ENSCVAG00000023049	polr3a	100	89.424	ENSCHIG00000000352	POLR3A	100	89.424	Capra_hircus
ENSCVAG00000023049	polr3a	100	88.993	ENSTSYG00000006671	POLR3A	100	88.993	Carlito_syrichta
ENSCVAG00000023049	polr3a	99	89.091	ENSCAPG00000016031	POLR3A	100	89.091	Cavia_aperea
ENSCVAG00000023049	polr3a	100	89.137	ENSCPOG00000022387	POLR3A	100	89.137	Cavia_porcellus
ENSCVAG00000023049	polr3a	100	88.058	ENSCCAG00000032995	POLR3A	96	92.405	Cebus_capucinus
ENSCVAG00000023049	polr3a	100	89.568	ENSCATG00000035842	POLR3A	98	92.405	Cercocebus_atys
ENSCVAG00000023049	polr3a	100	89.353	ENSCLAG00000009629	POLR3A	100	89.353	Chinchilla_lanigera
ENSCVAG00000023049	polr3a	100	89.568	ENSCSAG00000009292	POLR3A	100	89.568	Chlorocebus_sabaeus
ENSCVAG00000023049	polr3a	81	81.494	ENSCHOG00000008368	POLR3A	95	81.494	Choloepus_hoffmanni
ENSCVAG00000023049	polr3a	99	89.849	ENSCPBG00000002079	POLR3A	99	89.849	Chrysemys_picta_bellii
ENSCVAG00000023049	polr3a	99	68.876	ENSCSAVG00000009925	-	99	68.876	Ciona_savignyi
ENSCVAG00000023049	polr3a	86	85.341	ENSCANG00000041071	POLR3A	98	91.772	Colobus_angolensis_palliatus
ENSCVAG00000023049	polr3a	78	90.097	ENSCGRG00001015599	-	92	90.097	Cricetulus_griseus_chok1gshd
ENSCVAG00000023049	polr3a	88	88.661	ENSCGRG00000001019	Polr3a	100	88.661	Cricetulus_griseus_crigri
ENSCVAG00000023049	polr3a	100	95.468	ENSCSEG00000016653	polr3a	100	95.468	Cynoglossus_semilaevis
ENSCVAG00000023049	polr3a	99	91.427	ENSDARG00000102569	polr3a	99	91.427	Danio_rerio
ENSCVAG00000023049	polr3a	100	88.705	ENSDNOG00000010194	POLR3A	100	88.705	Dasypus_novemcinctus
ENSCVAG00000023049	polr3a	100	89.496	ENSDORG00000000184	Polr3a	100	89.496	Dipodomys_ordii
ENSCVAG00000023049	polr3a	99	57.164	FBgn0030687	CG17209	99	57.164	Drosophila_melanogaster
ENSCVAG00000023049	polr3a	88	88.259	ENSETEG00000007477	POLR3A	89	88.259	Echinops_telfairi
ENSCVAG00000023049	polr3a	59	75.410	ENSEBUG00000013761	polr3a	98	75.410	Eptatretus_burgeri
ENSCVAG00000023049	polr3a	100	89.496	ENSEASG00005023053	POLR3A	100	89.496	Equus_asinus_asinus
ENSCVAG00000023049	polr3a	97	89.717	ENSECAG00000019416	POLR3A	100	89.408	Equus_caballus
ENSCVAG00000023049	polr3a	97	84.405	ENSEEUG00000001774	POLR3A	100	85.160	Erinaceus_europaeus
ENSCVAG00000023049	polr3a	100	90.883	ENSELUG00000014016	polr3a	100	90.883	Esox_lucius
ENSCVAG00000023049	polr3a	100	89.640	ENSFCAG00000000843	POLR3A	100	89.640	Felis_catus
ENSCVAG00000023049	polr3a	100	89.720	ENSFALG00000006913	POLR3A	100	89.720	Ficedula_albicollis
ENSCVAG00000023049	polr3a	100	89.281	ENSFDAG00000007813	POLR3A	100	89.281	Fukomys_damarensis
ENSCVAG00000023049	polr3a	95	96.711	ENSFHEG00000011922	polr3a	99	96.711	Fundulus_heteroclitus
ENSCVAG00000023049	polr3a	100	87.686	ENSGMOG00000000291	polr3a	99	87.686	Gadus_morhua
ENSCVAG00000023049	polr3a	100	90.144	ENSGALG00000004947	POLR3A	100	90.144	Gallus_gallus
ENSCVAG00000023049	polr3a	100	96.978	ENSGAFG00000005112	polr3a	100	96.978	Gambusia_affinis
ENSCVAG00000023049	polr3a	100	93.453	ENSGACG00000002304	polr3a	100	93.453	Gasterosteus_aculeatus
ENSCVAG00000023049	polr3a	95	89.629	ENSGAGG00000010386	POLR3A	98	89.629	Gopherus_agassizii
ENSCVAG00000023049	polr3a	99	88.439	ENSGGOG00000027729	POLR3A	100	90.723	Gorilla_gorilla
ENSCVAG00000023049	polr3a	100	95.755	ENSHBUG00000018098	polr3a	100	95.755	Haplochromis_burtoni
ENSCVAG00000023049	polr3a	100	89.209	ENSHGLG00000017899	POLR3A	100	89.209	Heterocephalus_glaber_female
ENSCVAG00000023049	polr3a	100	89.209	ENSHGLG00100008483	POLR3A	100	89.209	Heterocephalus_glaber_male
ENSCVAG00000023049	polr3a	100	94.029	ENSHCOG00000001075	polr3a	100	94.029	Hippocampus_comes
ENSCVAG00000023049	polr3a	100	89.496	ENSSTOG00000012983	POLR3A	100	89.496	Ictidomys_tridecemlineatus
ENSCVAG00000023049	polr3a	100	95.468	ENSKMAG00000015290	polr3a	100	95.468	Kryptolebias_marmoratus
ENSCVAG00000023049	polr3a	99	93.880	ENSLBEG00000017214	polr3a	99	93.880	Labrus_bergylta
ENSCVAG00000023049	polr3a	97	87.658	ENSLACG00000018557	POLR3A	99	87.658	Latimeria_chalumnae
ENSCVAG00000023049	polr3a	100	92.103	ENSLOCG00000004942	polr3a	100	92.103	Lepisosteus_oculatus
ENSCVAG00000023049	polr3a	100	88.282	ENSLAFG00000016719	POLR3A	100	88.282	Loxodonta_africana
ENSCVAG00000023049	polr3a	100	89.496	ENSMFAG00000032218	POLR3A	100	89.496	Macaca_fascicularis
ENSCVAG00000023049	polr3a	100	89.496	ENSMMUG00000005514	POLR3A	98	92.405	Macaca_mulatta
ENSCVAG00000023049	polr3a	99	83.202	ENSMNEG00000035163	POLR3A	99	89.324	Macaca_nemestrina
ENSCVAG00000023049	polr3a	100	85.755	ENSMLEG00000030014	POLR3A	98	92.405	Mandrillus_leucophaeus
ENSCVAG00000023049	polr3a	100	95.180	ENSMAMG00000017497	polr3a	100	95.180	Mastacembelus_armatus
ENSCVAG00000023049	polr3a	100	95.755	ENSMZEG00005000576	polr3a	100	95.755	Maylandia_zebra
ENSCVAG00000023049	polr3a	100	73.011	ENSMGAG00000005713	-	100	73.011	Meleagris_gallopavo
ENSCVAG00000023049	polr3a	100	87.338	ENSMAUG00000016247	Polr3a	100	87.338	Mesocricetus_auratus
ENSCVAG00000023049	polr3a	100	89.568	ENSMICG00000005937	POLR3A	100	90.704	Microcebus_murinus
ENSCVAG00000023049	polr3a	100	89.640	ENSMOCG00000012185	Polr3a	100	89.640	Microtus_ochrogaster
ENSCVAG00000023049	polr3a	100	94.317	ENSMMOG00000013822	polr3a	100	94.317	Mola_mola
ENSCVAG00000023049	polr3a	100	89.209	ENSMODG00000001036	POLR3A	100	89.209	Monodelphis_domestica
ENSCVAG00000023049	polr3a	100	94.748	ENSMALG00000001249	polr3a	100	94.748	Monopterus_albus
ENSCVAG00000023049	polr3a	100	89.424	MGP_CAROLIEiJ_G0019016	Polr3a	100	89.424	Mus_caroli
ENSCVAG00000023049	polr3a	100	89.496	ENSMUSG00000025280	Polr3a	100	89.496	Mus_musculus
ENSCVAG00000023049	polr3a	100	89.424	MGP_PahariEiJ_G0030029	Polr3a	100	89.424	Mus_pahari
ENSCVAG00000023049	polr3a	100	86.835	MGP_SPRETEiJ_G0019894	Polr3a	97	95.050	Mus_spretus
ENSCVAG00000023049	polr3a	100	89.444	ENSMPUG00000003790	POLR3A	100	89.444	Mustela_putorius_furo
ENSCVAG00000023049	polr3a	100	88.273	ENSMLUG00000011522	POLR3A	100	88.273	Myotis_lucifugus
ENSCVAG00000023049	polr3a	100	88.058	ENSNGAG00000015863	Polr3a	100	88.058	Nannospalax_galili
ENSCVAG00000023049	polr3a	100	93.525	ENSNBRG00000014262	polr3a	100	93.525	Neolamprologus_brichardi
ENSCVAG00000023049	polr3a	88	83.133	ENSNLEG00000010501	POLR3A	92	83.133	Nomascus_leucogenys
ENSCVAG00000023049	polr3a	99	76.800	ENSMEUG00000012446	POLR3A	100	76.800	Notamacropus_eugenii
ENSCVAG00000023049	polr3a	100	84.892	ENSOPRG00000001880	-	100	84.892	Ochotona_princeps
ENSCVAG00000023049	polr3a	100	88.993	ENSODEG00000015146	POLR3A	100	88.993	Octodon_degus
ENSCVAG00000023049	polr3a	100	96.187	ENSONIG00000016129	polr3a	100	96.187	Oreochromis_niloticus
ENSCVAG00000023049	polr3a	99	87.980	ENSOANG00000007013	POLR3A	100	88.751	Ornithorhynchus_anatinus
ENSCVAG00000023049	polr3a	100	89.281	ENSOCUG00000012450	POLR3A	100	89.281	Oryctolagus_cuniculus
ENSCVAG00000023049	polr3a	100	95.396	ENSORLG00000008958	polr3a	100	95.396	Oryzias_latipes
ENSCVAG00000023049	polr3a	100	93.022	ENSORLG00020007525	polr3a	98	95.455	Oryzias_latipes_hni
ENSCVAG00000023049	polr3a	100	95.396	ENSORLG00015006633	polr3a	100	95.396	Oryzias_latipes_hsok
ENSCVAG00000023049	polr3a	100	94.748	ENSOMEG00000012865	polr3a	100	94.748	Oryzias_melastigma
ENSCVAG00000023049	polr3a	100	89.353	ENSOGAG00000010995	POLR3A	100	89.353	Otolemur_garnettii
ENSCVAG00000023049	polr3a	100	89.368	ENSOARG00000009656	POLR3A	100	89.368	Ovis_aries
ENSCVAG00000023049	polr3a	100	89.640	ENSPPRG00000002128	POLR3A	100	89.640	Panthera_pardus
ENSCVAG00000023049	polr3a	100	89.640	ENSPTIG00000020916	POLR3A	100	89.640	Panthera_tigris_altaica
ENSCVAG00000023049	polr3a	100	89.640	ENSPTRG00000002664	POLR3A	98	92.405	Pan_troglodytes
ENSCVAG00000023049	polr3a	100	89.496	ENSPANG00000022508	POLR3A	98	92.405	Papio_anubis
ENSCVAG00000023049	polr3a	100	92.446	ENSPKIG00000008140	polr3a	100	92.794	Paramormyrops_kingsleyae
ENSCVAG00000023049	polr3a	99	88.631	ENSPSIG00000002092	POLR3A	100	89.408	Pelodiscus_sinensis
ENSCVAG00000023049	polr3a	100	89.209	ENSPEMG00000006768	Polr3a	100	89.209	Peromyscus_maniculatus_bairdii
ENSCVAG00000023049	polr3a	100	89.209	ENSPCIG00000015842	POLR3A	100	89.209	Phascolarctos_cinereus
ENSCVAG00000023049	polr3a	54	97.584	ENSPFOG00000006458	polr3a	100	97.584	Poecilia_formosa
ENSCVAG00000023049	polr3a	100	97.338	ENSPLAG00000000997	polr3a	100	97.338	Poecilia_latipinna
ENSCVAG00000023049	polr3a	100	97.266	ENSPMEG00000006821	polr3a	100	97.266	Poecilia_mexicana
ENSCVAG00000023049	polr3a	100	97.338	ENSPREG00000002385	polr3a	100	97.338	Poecilia_reticulata
ENSCVAG00000023049	polr3a	93	89.466	ENSPPYG00000002305	POLR3A	99	89.466	Pongo_abelii
ENSCVAG00000023049	polr3a	85	78.244	ENSPCAG00000005690	POLR3A	87	78.244	Procavia_capensis
ENSCVAG00000023049	polr3a	100	89.496	ENSPCOG00000028311	POLR3A	100	89.496	Propithecus_coquereli
ENSCVAG00000023049	polr3a	100	88.058	ENSPVAG00000015553	POLR3A	100	88.058	Pteropus_vampyrus
ENSCVAG00000023049	polr3a	100	95.827	ENSPNYG00000020987	polr3a	100	95.827	Pundamilia_nyererei
ENSCVAG00000023049	polr3a	99	88.401	ENSPNAG00000006629	polr3a	99	88.401	Pygocentrus_nattereri
ENSCVAG00000023049	polr3a	100	89.496	ENSRNOG00000010008	Polr3a	100	89.496	Rattus_norvegicus
ENSCVAG00000023049	polr3a	100	85.899	ENSRBIG00000034967	POLR3A	98	92.405	Rhinopithecus_bieti
ENSCVAG00000023049	polr3a	100	89.496	ENSRROG00000025527	POLR3A	98	92.405	Rhinopithecus_roxellana
ENSCVAG00000023049	polr3a	98	50.693	YOR116C	RPO31	98	50.693	Saccharomyces_cerevisiae
ENSCVAG00000023049	polr3a	100	89.496	ENSSBOG00000022199	POLR3A	100	89.496	Saimiri_boliviensis_boliviensis
ENSCVAG00000023049	polr3a	100	89.137	ENSSHAG00000007588	POLR3A	94	89.137	Sarcophilus_harrisii
ENSCVAG00000023049	polr3a	100	92.878	ENSSFOG00015014357	polr3a	100	92.878	Scleropages_formosus
ENSCVAG00000023049	polr3a	100	95.252	ENSSMAG00000001780	polr3a	100	95.252	Scophthalmus_maximus
ENSCVAG00000023049	polr3a	100	95.899	ENSSDUG00000019840	polr3a	100	95.899	Seriola_dumerili
ENSCVAG00000023049	polr3a	100	95.755	ENSSLDG00000023908	polr3a	100	95.755	Seriola_lalandi_dorsalis
ENSCVAG00000023049	polr3a	69	89.655	ENSSARG00000009916	POLR3A	89	89.655	Sorex_araneus
ENSCVAG00000023049	polr3a	100	87.698	ENSSPUG00000013209	POLR3A	100	87.698	Sphenodon_punctatus
ENSCVAG00000023049	polr3a	100	95.755	ENSSPAG00000017712	polr3a	100	95.755	Stegastes_partitus
ENSCVAG00000023049	polr3a	100	89.353	ENSSSCG00000010327	POLR3A	100	89.353	Sus_scrofa
ENSCVAG00000023049	polr3a	100	89.712	ENSTGUG00000006423	-	100	89.712	Taeniopygia_guttata
ENSCVAG00000023049	polr3a	100	94.748	ENSTRUG00000013488	polr3a	100	94.748	Takifugu_rubripes
ENSCVAG00000023049	polr3a	100	94.397	ENSTNIG00000013151	polr3a	100	94.397	Tetraodon_nigroviridis
ENSCVAG00000023049	polr3a	71	90.426	ENSTBEG00000015288	POLR3A	75	90.426	Tupaia_belangeri
ENSCVAG00000023049	polr3a	100	83.309	ENSTTRG00000007817	POLR3A	100	83.309	Tursiops_truncatus
ENSCVAG00000023049	polr3a	100	87.194	ENSUAMG00000011283	POLR3A	100	87.194	Ursus_americanus
ENSCVAG00000023049	polr3a	100	89.496	ENSUMAG00000013913	POLR3A	100	89.496	Ursus_maritimus
ENSCVAG00000023049	polr3a	99	81.527	ENSVPAG00000003285	POLR3A	100	81.527	Vicugna_pacos
ENSCVAG00000023049	polr3a	100	89.496	ENSVVUG00000025523	POLR3A	100	89.496	Vulpes_vulpes
ENSCVAG00000023049	polr3a	86	89.891	ENSXETG00000018101	polr3a	100	89.891	Xenopus_tropicalis
ENSCVAG00000023049	polr3a	100	97.338	ENSXMAG00000015213	polr3a	100	97.338	Xiphophorus_maculatus