EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCVAG00000023098 (Gene tree)
Gene ID: 107105101
Gene Symbol: rpl29
Alias: zgc:92868
Full Name: ribosomal protein L29
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Plus strand
Length: 4460 bases
Position: chrJPKM01097741.1:31763-36222
Accession: 107105101
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000019707	Ribosomal_L29e	PF01779.17	6.1e-27	1	1
ENSCVAP00000032783	Ribosomal_L29e	PF01779.17	2.5e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000028936	-	1147	-	ENSCVAP00000032783	106 (aa)	-	-
ENSCVAT00000028930	-	679	XM_015405216	ENSCVAP00000019707	64 (aa)	XP_015260702	UPI0007426F5F

Gene Model

Click here to download ENSCVAG00000023098's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000023098's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000023098	rpl29	86	100.000	ENSG00000162244	RPL29	97	94.444	Homo_sapiens
ENSCVAG00000023098	rpl29	84	90.741	ENSAPOG00000002586	rpl29	78	94.000	Acanthochromis_polyacanthus
ENSCVAG00000023098	rpl29	84	96.296	ENSACIG00000018340	rpl29	78	96.000	Amphilophus_citrinellus
ENSCVAG00000023098	rpl29	84	94.444	ENSAOCG00000016652	rpl29	78	98.000	Amphiprion_ocellaris
ENSCVAG00000023098	rpl29	84	94.444	ENSAPEG00000005754	rpl29	78	98.000	Amphiprion_percula
ENSCVAG00000023098	rpl29	72	97.826	ENSACAG00000006888	RPL29	77	98.000	Anolis_carolinensis
ENSCVAG00000023098	rpl29	86	100.000	ENSANAG00000024147	-	77	82.609	Aotus_nancymaae
ENSCVAG00000023098	rpl29	100	95.312	ENSACLG00000017820	rpl29	78	98.000	Astatotilapia_calliptera
ENSCVAG00000023098	rpl29	100	87.500	ENSAMXG00000038794	rpl29	78	96.000	Astyanax_mexicanus
ENSCVAG00000023098	rpl29	97	53.226	WBGene00004443	rpl-29	81	62.000	Caenorhabditis_elegans
ENSCVAG00000023098	rpl29	86	100.000	ENSCJAG00000042339	-	77	82.609	Callithrix_jacchus
ENSCVAG00000023098	rpl29	86	100.000	ENSCCAG00000027980	-	58	100.000	Cebus_capucinus
ENSCVAG00000023098	rpl29	81	76.923	ENSCING00000018496	-	86	78.000	Ciona_intestinalis
ENSCVAG00000023098	rpl29	81	78.846	ENSCSAVG00000005231	-	85	80.000	Ciona_savignyi
ENSCVAG00000023098	rpl29	86	100.000	ENSCGRG00001016452	-	81	100.000	Cricetulus_griseus_chok1gshd
ENSCVAG00000023098	rpl29	78	96.000	ENSCSEG00000010267	rpl29	76	96.000	Cynoglossus_semilaevis
ENSCVAG00000023098	rpl29	98	90.625	ENSDARG00000077717	rpl29	78	100.000	Danio_rerio
ENSCVAG00000023098	rpl29	78	64.000	FBgn0016726	RpL29	66	64.000	Drosophila_melanogaster
ENSCVAG00000023098	rpl29	67	90.698	ENSEASG00005005507	-	66	90.698	Equus_asinus_asinus
ENSCVAG00000023098	rpl29	95	83.607	ENSELUG00000015592	RL29	71	88.000	Esox_lucius
ENSCVAG00000023098	rpl29	98	55.556	ENSFCAG00000035470	-	58	70.455	Felis_catus
ENSCVAG00000023098	rpl29	81	71.154	ENSFCAG00000043006	-	62	70.000	Felis_catus
ENSCVAG00000023098	rpl29	72	93.478	ENSFALG00000008925	RPL29	74	94.000	Ficedula_albicollis
ENSCVAG00000023098	rpl29	100	96.875	ENSFHEG00000015425	rpl29	100	96.875	Fundulus_heteroclitus
ENSCVAG00000023098	rpl29	84	87.037	ENSGMOG00000003626	rpl29	66	86.000	Gadus_morhua
ENSCVAG00000023098	rpl29	72	97.826	ENSGALG00000026978	RPL29	70	98.000	Gallus_gallus
ENSCVAG00000023098	rpl29	100	96.875	ENSGAFG00000012868	rpl29	100	96.875	Gambusia_affinis
ENSCVAG00000023098	rpl29	95	91.803	ENSGACG00000007041	rpl29	65	94.000	Gasterosteus_aculeatus
ENSCVAG00000023098	rpl29	72	79.167	ENSGAGG00000024203	-	89	79.167	Gopherus_agassizii
ENSCVAG00000023098	rpl29	86	100.000	ENSGGOG00000024691	RPL29	62	94.595	Gorilla_gorilla
ENSCVAG00000023098	rpl29	100	95.312	ENSHBUG00000010519	rpl29	78	98.000	Haplochromis_burtoni
ENSCVAG00000023098	rpl29	97	96.774	ENSHCOG00000000478	rpl29	79	96.774	Hippocampus_comes
ENSCVAG00000023098	rpl29	100	87.500	ENSIPUG00000001196	rpl29	78	98.000	Ictalurus_punctatus
ENSCVAG00000023098	rpl29	100	96.875	ENSKMAG00000011291	rpl29	100	96.875	Kryptolebias_marmoratus
ENSCVAG00000023098	rpl29	84	92.593	ENSLBEG00000016213	rpl29	74	94.000	Labrus_bergylta
ENSCVAG00000023098	rpl29	91	89.655	ENSLACG00000018031	-	74	92.000	Latimeria_chalumnae
ENSCVAG00000023098	rpl29	95	88.525	ENSLACG00000018622	rpl29	78	92.000	Latimeria_chalumnae
ENSCVAG00000023098	rpl29	72	95.652	ENSLOCG00000013798	rpl29	77	96.000	Lepisosteus_oculatus
ENSCVAG00000023098	rpl29	84	94.444	ENSMAMG00000014274	rpl29	53	96.000	Mastacembelus_armatus
ENSCVAG00000023098	rpl29	100	95.312	ENSMZEG00005013519	rpl29	78	98.000	Maylandia_zebra
ENSCVAG00000023098	rpl29	72	97.826	ENSMGAG00000001213	RPL29	70	98.000	Meleagris_gallopavo
ENSCVAG00000023098	rpl29	77	85.714	ENSMICG00000049466	-	74	85.714	Microcebus_murinus
ENSCVAG00000023098	rpl29	100	92.188	ENSMMOG00000010430	rpl29	78	94.000	Mola_mola
ENSCVAG00000023098	rpl29	84	96.296	ENSMALG00000009023	rpl29	64	98.000	Monopterus_albus
ENSCVAG00000023098	rpl29	86	100.000	ENSMUSG00000048758	Rpl29	81	100.000	Mus_musculus
ENSCVAG00000023098	rpl29	100	95.312	ENSNBRG00000022109	rpl29	78	98.000	Neolamprologus_brichardi
ENSCVAG00000023098	rpl29	98	95.238	ENSONIG00000014377	rpl29	79	98.000	Oreochromis_niloticus
ENSCVAG00000023098	rpl29	100	95.312	ENSORLG00000023610	rpl29	53	98.000	Oryzias_latipes
ENSCVAG00000023098	rpl29	100	95.312	ENSORLG00020018665	rpl29	53	98.000	Oryzias_latipes_hni
ENSCVAG00000023098	rpl29	100	95.312	ENSORLG00015014455	rpl29	53	98.000	Oryzias_latipes_hsok
ENSCVAG00000023098	rpl29	100	96.875	ENSOMEG00000019919	rpl29	100	96.875	Oryzias_melastigma
ENSCVAG00000023098	rpl29	56	97.222	ENSPPAG00000037142	-	61	97.222	Pan_paniscus
ENSCVAG00000023098	rpl29	81	75.000	ENSPPRG00000011689	-	77	74.000	Panthera_pardus
ENSCVAG00000023098	rpl29	81	73.077	ENSPTIG00000011913	-	61	72.000	Panthera_tigris_altaica
ENSCVAG00000023098	rpl29	86	100.000	ENSPTRG00000043237	RPL29	63	94.595	Pan_troglodytes
ENSCVAG00000023098	rpl29	72	93.478	ENSPKIG00000025048	rpl29	76	94.000	Paramormyrops_kingsleyae
ENSCVAG00000023098	rpl29	91	96.552	ENSPSIG00000014699	RPL29	92	96.552	Pelodiscus_sinensis
ENSCVAG00000023098	rpl29	97	88.710	ENSPMGG00000005361	rpl29	74	94.000	Periophthalmus_magnuspinnatus
ENSCVAG00000023098	rpl29	95	98.361	ENSPFOG00000011385	rpl29	100	98.361	Poecilia_formosa
ENSCVAG00000023098	rpl29	100	96.875	ENSPLAG00000012042	rpl29	100	96.875	Poecilia_latipinna
ENSCVAG00000023098	rpl29	100	98.438	ENSPMEG00000018297	rpl29	100	98.438	Poecilia_mexicana
ENSCVAG00000023098	rpl29	100	98.438	ENSPREG00000007066	rpl29	100	98.438	Poecilia_reticulata
ENSCVAG00000023098	rpl29	100	95.312	ENSPNYG00000019481	rpl29	78	98.000	Pundamilia_nyererei
ENSCVAG00000023098	rpl29	100	90.625	ENSPNAG00000007550	rpl29	78	100.000	Pygocentrus_nattereri
ENSCVAG00000023098	rpl29	81	90.385	ENSRNOG00000025794	AABR07021239.1	67	90.000	Rattus_norvegicus
ENSCVAG00000023098	rpl29	72	73.913	YFR032C-A	RPL29	78	73.913	Saccharomyces_cerevisiae
ENSCVAG00000023098	rpl29	84	94.444	ENSSMAG00000013571	rpl29	78	98.000	Scophthalmus_maximus
ENSCVAG00000023098	rpl29	72	65.957	ENSSDUG00000020458	-	76	65.957	Seriola_dumerili
ENSCVAG00000023098	rpl29	78	96.000	ENSSDUG00000016140	rpl29	78	96.000	Seriola_dumerili
ENSCVAG00000023098	rpl29	78	96.000	ENSSLDG00000003932	rpl29	78	96.000	Seriola_lalandi_dorsalis
ENSCVAG00000023098	rpl29	72	97.826	ENSSPUG00000003760	RPL29	79	98.000	Sphenodon_punctatus
ENSCVAG00000023098	rpl29	84	87.037	ENSSPAG00000020292	rpl29	78	88.000	Stegastes_partitus
ENSCVAG00000023098	rpl29	59	94.737	ENSSSCG00000037047	-	86	95.238	Sus_scrofa
ENSCVAG00000023098	rpl29	84	70.370	ENSSSCG00000031314	-	75	70.833	Sus_scrofa
ENSCVAG00000023098	rpl29	72	93.478	ENSTGUG00000006027	RPL29	79	94.000	Taeniopygia_guttata
ENSCVAG00000023098	rpl29	98	87.302	ENSTRUG00000022273	rpl29	77	88.000	Takifugu_rubripes
ENSCVAG00000023098	rpl29	83	92.453	ENSTNIG00000014816	rpl29	74	92.000	Tetraodon_nigroviridis
ENSCVAG00000023098	rpl29	100	75.000	ENSTBEG00000000807	-	60	84.000	Tupaia_belangeri
ENSCVAG00000023098	rpl29	75	95.833	ENSUAMG00000002601	-	84	95.833	Ursus_americanus
ENSCVAG00000023098	rpl29	72	93.478	ENSVVUG00000012400	-	88	94.000	Vulpes_vulpes
ENSCVAG00000023098	rpl29	86	98.182	ENSXETG00000010811	rpl29	73	98.182	Xenopus_tropicalis
ENSCVAG00000023098	rpl29	100	93.750	ENSXCOG00000013543	rpl29	78	98.000	Xiphophorus_couchianus
ENSCVAG00000023098	rpl29	100	96.875	ENSXMAG00000020948	rpl29	100	96.875	Xiphophorus_maculatus