EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCVAG00000023166 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Minus strand
Length: 4514 bases
Position: chrKL652782.1:5081-9594
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000032819	MMR_HSR1	PF01926.23	8.6e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000028986	-	792	-	ENSCVAP00000032819	263 (aa)	-	-

Gene Model

Click here to download ENSCVAG00000023166's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000023166's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCVAG00000023166	-	96	40.784	ENSCVAG00000004989	-	78	40.784
ENSCVAG00000023166	-	97	39.689	ENSCVAG00000013437	zgc:153654	54	39.689
ENSCVAG00000023166	-	98	40.698	ENSCVAG00000010378	-	57	40.698
ENSCVAG00000023166	-	97	44.186	ENSCVAG00000016719	-	89	44.186
ENSCVAG00000023166	-	98	39.922	ENSCVAG00000015674	-	58	39.922
ENSCVAG00000023166	-	65	46.857	ENSCVAG00000014640	-	80	46.857
ENSCVAG00000023166	-	98	41.085	ENSCVAG00000000409	-	57	41.085
ENSCVAG00000023166	-	98	41.085	ENSCVAG00000000405	-	59	40.310
ENSCVAG00000023166	-	95	58.893	ENSCVAG00000007214	-	98	58.893

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000023166	-	97	49.416	ENSACIG00000015616	-	95	46.947	Amphilophus_citrinellus
ENSCVAG00000023166	-	97	52.529	ENSACIG00000000741	-	91	52.529	Amphilophus_citrinellus
ENSCVAG00000023166	-	93	39.431	ENSACIG00000015237	-	91	39.431	Amphilophus_citrinellus
ENSCVAG00000023166	-	97	46.304	ENSACIG00000004426	-	88	46.304	Amphilophus_citrinellus
ENSCVAG00000023166	-	97	45.525	ENSACIG00000004501	-	89	45.525	Amphilophus_citrinellus
ENSCVAG00000023166	-	97	47.082	ENSACIG00000015684	-	91	47.082	Amphilophus_citrinellus
ENSCVAG00000023166	-	97	46.693	ENSACIG00000004444	-	92	45.914	Amphilophus_citrinellus
ENSCVAG00000023166	-	97	45.174	ENSACIG00000004408	-	89	45.174	Amphilophus_citrinellus
ENSCVAG00000023166	-	97	45.136	ENSACIG00000004521	-	90	45.136	Amphilophus_citrinellus
ENSCVAG00000023166	-	99	50.379	ENSAOCG00000002056	-	87	50.379	Amphiprion_ocellaris
ENSCVAG00000023166	-	96	51.383	ENSAPEG00000021053	-	89	51.383	Amphiprion_percula
ENSCVAG00000023166	-	99	46.792	ENSATEG00000002718	-	82	46.792	Anabas_testudineus
ENSCVAG00000023166	-	97	52.344	ENSATEG00000002869	-	91	52.344	Anabas_testudineus
ENSCVAG00000023166	-	96	42.688	ENSACLG00000027615	-	94	42.688	Astatotilapia_calliptera
ENSCVAG00000023166	-	87	37.391	ENSACLG00000016390	-	88	37.391	Astatotilapia_calliptera
ENSCVAG00000023166	-	97	46.094	ENSACLG00000002020	-	93	46.094	Astatotilapia_calliptera
ENSCVAG00000023166	-	96	45.850	ENSACLG00000016487	-	84	45.850	Astatotilapia_calliptera
ENSCVAG00000023166	-	95	45.098	ENSACLG00000018321	-	88	46.667	Astatotilapia_calliptera
ENSCVAG00000023166	-	95	45.882	ENSACLG00000010292	-	89	45.882	Astatotilapia_calliptera
ENSCVAG00000023166	-	97	35.019	ENSAMXG00000037563	-	91	35.019	Astyanax_mexicanus
ENSCVAG00000023166	-	98	42.857	ENSCSEG00000018832	-	96	42.857	Cynoglossus_semilaevis
ENSCVAG00000023166	-	96	40.392	ENSDARG00000092634	CABZ01000634.1	86	40.392	Danio_rerio
ENSCVAG00000023166	-	96	41.569	ENSDARG00000093857	si:dkey-79f11.10	79	41.569	Danio_rerio
ENSCVAG00000023166	-	65	39.535	ENSDARG00000092361	si:dkey-79f11.7	72	39.535	Danio_rerio
ENSCVAG00000023166	-	96	39.216	ENSDARG00000107486	CR855320.3	86	39.216	Danio_rerio
ENSCVAG00000023166	-	78	46.829	ENSDARG00000015678	si:dkeyp-75b4.9	97	46.829	Danio_rerio
ENSCVAG00000023166	-	96	37.945	ENSDARG00000010729	CABZ01073795.1	87	37.945	Danio_rerio
ENSCVAG00000023166	-	97	41.860	ENSDARG00000075791	si:dkey-79f11.5	82	41.860	Danio_rerio
ENSCVAG00000023166	-	94	36.220	ENSDARG00000095309	si:dkey-79f11.9	90	36.220	Danio_rerio
ENSCVAG00000023166	-	96	41.569	ENSDARG00000095673	si:dkey-79f11.8	78	41.569	Danio_rerio
ENSCVAG00000023166	-	94	37.945	ENSDARG00000029720	si:dkeyp-9d4.2	84	38.735	Danio_rerio
ENSCVAG00000023166	-	95	47.222	ENSFHEG00000018078	-	91	47.222	Fundulus_heteroclitus
ENSCVAG00000023166	-	96	47.826	ENSFHEG00000018069	-	86	47.826	Fundulus_heteroclitus
ENSCVAG00000023166	-	78	56.796	ENSFHEG00000019992	-	70	56.796	Fundulus_heteroclitus
ENSCVAG00000023166	-	97	57.198	ENSFHEG00000021105	-	86	57.198	Fundulus_heteroclitus
ENSCVAG00000023166	-	89	42.083	ENSGAFG00000019422	-	91	42.083	Gambusia_affinis
ENSCVAG00000023166	-	96	44.706	ENSGAFG00000019423	-	56	44.706	Gambusia_affinis
ENSCVAG00000023166	-	97	48.249	ENSGACG00000012548	-	87	48.249	Gasterosteus_aculeatus
ENSCVAG00000023166	-	97	50.195	ENSGACG00000001319	-	95	50.195	Gasterosteus_aculeatus
ENSCVAG00000023166	-	96	50.000	ENSGACG00000012556	-	81	50.198	Gasterosteus_aculeatus
ENSCVAG00000023166	-	94	46.559	ENSHBUG00000010945	-	91	46.559	Haplochromis_burtoni
ENSCVAG00000023166	-	97	44.747	ENSIPUG00000005624	-	94	44.747	Ictalurus_punctatus
ENSCVAG00000023166	-	97	42.188	ENSIPUG00000007632	-	73	42.188	Ictalurus_punctatus
ENSCVAG00000023166	-	97	44.531	ENSIPUG00000006852	-	79	44.531	Ictalurus_punctatus
ENSCVAG00000023166	-	69	40.110	ENSIPUG00000006725	-	85	40.110	Ictalurus_punctatus
ENSCVAG00000023166	-	95	46.429	ENSKMAG00000000369	-	92	46.429	Kryptolebias_marmoratus
ENSCVAG00000023166	-	97	72.441	ENSKMAG00000006729	-	94	72.441	Kryptolebias_marmoratus
ENSCVAG00000023166	-	97	45.882	ENSKMAG00000000325	-	91	45.882	Kryptolebias_marmoratus
ENSCVAG00000023166	-	95	53.175	ENSMAMG00000003570	-	87	53.175	Mastacembelus_armatus
ENSCVAG00000023166	-	96	43.798	ENSMAMG00000003546	-	85	43.798	Mastacembelus_armatus
ENSCVAG00000023166	-	97	46.304	ENSMZEG00005008329	-	97	46.304	Maylandia_zebra
ENSCVAG00000023166	-	96	45.455	ENSMZEG00005008301	-	95	45.059	Maylandia_zebra
ENSCVAG00000023166	-	95	46.275	ENSMZEG00005015498	-	89	46.275	Maylandia_zebra
ENSCVAG00000023166	-	96	41.502	ENSNBRG00000020744	-	85	41.502	Neolamprologus_brichardi
ENSCVAG00000023166	-	95	44.882	ENSNBRG00000024253	-	85	44.882	Neolamprologus_brichardi
ENSCVAG00000023166	-	96	45.850	ENSNBRG00000006386	-	95	45.850	Neolamprologus_brichardi
ENSCVAG00000023166	-	96	46.245	ENSNBRG00000020806	-	86	46.245	Neolamprologus_brichardi
ENSCVAG00000023166	-	96	46.640	ENSNBRG00000022075	-	89	46.640	Neolamprologus_brichardi
ENSCVAG00000023166	-	96	42.460	ENSNBRG00000006414	-	85	42.460	Neolamprologus_brichardi
ENSCVAG00000023166	-	91	45.833	ENSNBRG00000020781	-	96	45.833	Neolamprologus_brichardi
ENSCVAG00000023166	-	95	47.059	ENSNBRG00000023290	-	85	47.059	Neolamprologus_brichardi
ENSCVAG00000023166	-	97	44.061	ENSONIG00000018790	-	88	44.061	Oreochromis_niloticus
ENSCVAG00000023166	-	93	63.115	ENSONIG00000016843	-	99	63.115	Oreochromis_niloticus
ENSCVAG00000023166	-	69	48.901	ENSONIG00000013227	-	100	48.901	Oreochromis_niloticus
ENSCVAG00000023166	-	96	47.036	ENSONIG00000015247	-	89	47.036	Oreochromis_niloticus
ENSCVAG00000023166	-	96	48.617	ENSONIG00000015167	-	97	48.617	Oreochromis_niloticus
ENSCVAG00000023166	-	94	44.130	ENSONIG00000017465	-	99	44.130	Oreochromis_niloticus
ENSCVAG00000023166	-	96	45.850	ENSONIG00000015371	-	98	45.850	Oreochromis_niloticus
ENSCVAG00000023166	-	97	46.693	ENSONIG00000012319	-	98	46.693	Oreochromis_niloticus
ENSCVAG00000023166	-	92	47.737	ENSONIG00000012317	-	97	47.737	Oreochromis_niloticus
ENSCVAG00000023166	-	97	51.163	ENSPMGG00000004994	-	89	51.163	Periophthalmus_magnuspinnatus
ENSCVAG00000023166	-	96	49.407	ENSPMGG00000012906	-	89	49.407	Periophthalmus_magnuspinnatus
ENSCVAG00000023166	-	95	52.988	ENSPMGG00000002695	-	95	52.988	Periophthalmus_magnuspinnatus
ENSCVAG00000023166	-	97	52.529	ENSPMGG00000022341	-	76	52.529	Periophthalmus_magnuspinnatus
ENSCVAG00000023166	-	96	47.059	ENSPFOG00000015382	-	89	47.059	Poecilia_formosa
ENSCVAG00000023166	-	98	79.767	ENSPFOG00000003807	-	90	79.767	Poecilia_formosa
ENSCVAG00000023166	-	95	43.651	ENSPFOG00000015455	-	84	43.651	Poecilia_formosa
ENSCVAG00000023166	-	98	73.930	ENSPFOG00000003841	-	88	73.930	Poecilia_formosa
ENSCVAG00000023166	-	96	44.314	ENSPFOG00000015493	-	87	44.488	Poecilia_formosa
ENSCVAG00000023166	-	97	59.216	ENSPLAG00000018274	-	90	59.216	Poecilia_latipinna
ENSCVAG00000023166	-	95	46.850	ENSPMEG00000018635	-	88	46.850	Poecilia_mexicana
ENSCVAG00000023166	-	95	43.254	ENSPMEG00000018626	-	88	43.254	Poecilia_mexicana
ENSCVAG00000023166	-	98	70.039	ENSPREG00000005137	-	94	70.039	Poecilia_reticulata
ENSCVAG00000023166	-	96	45.455	ENSPNYG00000024019	-	85	45.455	Pundamilia_nyererei
ENSCVAG00000023166	-	95	48.000	ENSPNYG00000005478	-	86	48.000	Pundamilia_nyererei
ENSCVAG00000023166	-	95	47.451	ENSPNYG00000001584	-	88	47.451	Pundamilia_nyererei
ENSCVAG00000023166	-	98	40.385	ENSPNAG00000009266	-	95	40.385	Pygocentrus_nattereri
ENSCVAG00000023166	-	98	38.745	ENSPNAG00000006327	-	66	38.745	Pygocentrus_nattereri
ENSCVAG00000023166	-	97	46.094	ENSSDUG00000002417	-	94	46.094	Seriola_dumerili
ENSCVAG00000023166	-	97	45.312	ENSSDUG00000002359	-	94	45.312	Seriola_dumerili
ENSCVAG00000023166	-	97	48.047	ENSSLDG00000008952	-	88	48.047	Seriola_lalandi_dorsalis
ENSCVAG00000023166	-	98	67.315	ENSSLDG00000016397	-	95	67.315	Seriola_lalandi_dorsalis
ENSCVAG00000023166	-	96	54.150	ENSSPAG00000012856	-	89	54.150	Stegastes_partitus
ENSCVAG00000023166	-	96	51.373	ENSSPAG00000012915	-	95	51.373	Stegastes_partitus
ENSCVAG00000023166	-	74	74.490	ENSXCOG00000008517	-	61	74.490	Xiphophorus_couchianus
ENSCVAG00000023166	-	64	55.952	ENSXCOG00000003913	-	87	55.952	Xiphophorus_couchianus
ENSCVAG00000023166	-	89	44.068	ENSXCOG00000019639	-	89	44.068	Xiphophorus_couchianus
ENSCVAG00000023166	-	97	59.922	ENSXMAG00000029117	-	91	59.922	Xiphophorus_maculatus
ENSCVAG00000023166	-	97	44.574	ENSXMAG00000009971	-	67	44.574	Xiphophorus_maculatus
ENSCVAG00000023166	-	95	45.098	ENSXMAG00000009973	-	90	45.098	Xiphophorus_maculatus