EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCVAG00000023215 (Gene tree)
Gene ID: 107098600
Gene Symbol: mri1
Alias: zgc:172216
Full Name: methylthioribose-1-phosphate isomerase 1
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Minus strand
Length: 11839 bases
Position: chrKL653292.1:361650-373488
Accession: 107098600
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000019801	IF-2B	PF01008.17	1.2e-82	1	1
ENSCVAP00000032845	IF-2B	PF01008.17	1.4e-56	1	2
ENSCVAP00000032845	IF-2B	PF01008.17	1.4e-56	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000033307	-	990	-	ENSCVAP00000032845	329 (aa)	-	-
ENSCVAT00000029041	-	1454	XM_015396363	ENSCVAP00000019801	353 (aa)	XP_015251849	UPI0007426070

Gene Model

Click here to download ENSCVAG00000023215's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000023215's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000023215	mri1	98	69.492	ENSG00000037757	MRI1	96	69.492	Homo_sapiens
ENSCVAG00000023215	mri1	100	97.167	ENSAPOG00000009673	mri1	100	97.167	Acanthochromis_polyacanthus
ENSCVAG00000023215	mri1	98	67.227	ENSAMEG00000012918	MRI1	99	67.227	Ailuropoda_melanoleuca
ENSCVAG00000023215	mri1	100	97.450	ENSACIG00000009199	mri1	100	97.450	Amphilophus_citrinellus
ENSCVAG00000023215	mri1	100	97.450	ENSAOCG00000009931	mri1	100	97.450	Amphiprion_ocellaris
ENSCVAG00000023215	mri1	100	97.450	ENSAPEG00000013553	mri1	100	97.450	Amphiprion_percula
ENSCVAG00000023215	mri1	100	96.601	ENSATEG00000019410	mri1	100	96.601	Anabas_testudineus
ENSCVAG00000023215	mri1	99	69.577	ENSACAG00000003475	MRI1	99	69.577	Anolis_carolinensis
ENSCVAG00000023215	mri1	98	61.864	ENSANAG00000035382	-	97	61.864	Aotus_nancymaae
ENSCVAG00000023215	mri1	98	68.927	ENSANAG00000020896	-	96	68.927	Aotus_nancymaae
ENSCVAG00000023215	mri1	100	97.734	ENSACLG00000020412	mri1	100	97.734	Astatotilapia_calliptera
ENSCVAG00000023215	mri1	100	90.085	ENSAMXG00000011982	mri1	100	90.085	Astyanax_mexicanus
ENSCVAG00000023215	mri1	99	68.994	ENSBTAG00000002524	MRI1	91	68.994	Bos_taurus
ENSCVAG00000023215	mri1	97	42.775	WBGene00007236	C01G10.9	93	42.775	Caenorhabditis_elegans
ENSCVAG00000023215	mri1	98	69.122	ENSCJAG00000044187	MRI1	94	69.122	Callithrix_jacchus
ENSCVAG00000023215	mri1	98	68.927	ENSCAFG00000016615	MRI1	99	69.209	Canis_familiaris
ENSCVAG00000023215	mri1	98	68.927	ENSCAFG00020006659	MRI1	99	69.209	Canis_lupus_dingo
ENSCVAG00000023215	mri1	98	70.621	ENSCHIG00000019343	MRI1	98	70.621	Capra_hircus
ENSCVAG00000023215	mri1	66	65.106	ENSTSYG00000034486	MRI1	95	65.106	Carlito_syrichta
ENSCVAG00000023215	mri1	65	76.087	ENSCAPG00000015487	MRI1	97	76.087	Cavia_aperea
ENSCVAG00000023215	mri1	98	70.621	ENSCPOG00000013191	MRI1	98	70.621	Cavia_porcellus
ENSCVAG00000023215	mri1	98	67.797	ENSCCAG00000014292	-	94	67.797	Cebus_capucinus
ENSCVAG00000023215	mri1	98	63.610	ENSCCAG00000035484	-	97	63.610	Cebus_capucinus
ENSCVAG00000023215	mri1	98	54.802	ENSCATG00000029747	MRI1	95	54.802	Cercocebus_atys
ENSCVAG00000023215	mri1	100	68.889	ENSCLAG00000013025	MRI1	99	68.889	Chinchilla_lanigera
ENSCVAG00000023215	mri1	98	68.333	ENSCSAG00000006463	MRI1	96	68.333	Chlorocebus_sabaeus
ENSCVAG00000023215	mri1	54	56.923	ENSCING00000000162	-	99	56.923	Ciona_intestinalis
ENSCVAG00000023215	mri1	97	61.850	ENSCSAVG00000003107	-	98	61.850	Ciona_savignyi
ENSCVAG00000023215	mri1	87	69.329	ENSCANG00000043216	MRI1	88	69.329	Colobus_angolensis_palliatus
ENSCVAG00000023215	mri1	98	68.362	ENSCGRG00001015655	MRI1	96	68.362	Cricetulus_griseus_chok1gshd
ENSCVAG00000023215	mri1	98	68.362	ENSCGRG00000005697	MRI1	96	68.362	Cricetulus_griseus_crigri
ENSCVAG00000023215	mri1	100	93.201	ENSCSEG00000011410	mri1	100	93.201	Cynoglossus_semilaevis
ENSCVAG00000023215	mri1	100	90.368	ENSDARG00000075754	mri1	99	92.090	Danio_rerio
ENSCVAG00000023215	mri1	98	67.514	ENSDNOG00000047045	MRI1	99	67.514	Dasypus_novemcinctus
ENSCVAG00000023215	mri1	98	68.362	ENSDORG00000010875	Mri1	98	68.362	Dipodomys_ordii
ENSCVAG00000023215	mri1	99	56.183	FBgn0039849	CG11334	99	56.183	Drosophila_melanogaster
ENSCVAG00000023215	mri1	88	66.139	ENSETEG00000017174	MRI1	100	66.139	Echinops_telfairi
ENSCVAG00000023215	mri1	98	59.544	ENSEBUG00000014184	mri1	99	59.544	Eptatretus_burgeri
ENSCVAG00000023215	mri1	98	68.555	ENSEASG00005000151	MRI1	99	68.555	Equus_asinus_asinus
ENSCVAG00000023215	mri1	98	68.555	ENSECAG00000010706	MRI1	99	68.555	Equus_caballus
ENSCVAG00000023215	mri1	100	80.170	ENSELUG00000016174	mri1	100	79.887	Esox_lucius
ENSCVAG00000023215	mri1	96	62.824	ENSFCAG00000011508	MRI1	98	63.401	Felis_catus
ENSCVAG00000023215	mri1	66	72.766	ENSFDAG00000017424	MRI1	90	73.077	Fukomys_damarensis
ENSCVAG00000023215	mri1	100	98.300	ENSFHEG00000009358	MRI1	100	98.300	Fundulus_heteroclitus
ENSCVAG00000023215	mri1	95	81.953	ENSGMOG00000002273	mri1	98	81.953	Gadus_morhua
ENSCVAG00000023215	mri1	93	55.425	ENSGALG00000034575	MRI1	97	55.425	Gallus_gallus
ENSCVAG00000023215	mri1	100	96.884	ENSGAFG00000010575	mri1	100	96.884	Gambusia_affinis
ENSCVAG00000023215	mri1	95	95.821	ENSGACG00000018995	mri1	100	95.821	Gasterosteus_aculeatus
ENSCVAG00000023215	mri1	98	70.538	ENSGAGG00000010411	MRI1	98	70.538	Gopherus_agassizii
ENSCVAG00000023215	mri1	98	69.209	ENSGGOG00000006628	MRI1	96	69.209	Gorilla_gorilla
ENSCVAG00000023215	mri1	100	97.734	ENSHBUG00000018620	mri1	100	97.734	Haplochromis_burtoni
ENSCVAG00000023215	mri1	98	68.079	ENSHGLG00000010969	MRI1	98	68.079	Heterocephalus_glaber_female
ENSCVAG00000023215	mri1	98	65.909	ENSHGLG00100007151	MRI1	98	65.909	Heterocephalus_glaber_male
ENSCVAG00000023215	mri1	100	95.751	ENSHCOG00000014695	mri1	100	95.751	Hippocampus_comes
ENSCVAG00000023215	mri1	100	92.635	ENSIPUG00000008756	mri1	100	92.635	Ictalurus_punctatus
ENSCVAG00000023215	mri1	98	69.774	ENSSTOG00000020750	MRI1	98	69.774	Ictidomys_tridecemlineatus
ENSCVAG00000023215	mri1	99	68.245	ENSJJAG00000018104	Mri1	97	68.245	Jaculus_jaculus
ENSCVAG00000023215	mri1	100	96.884	ENSKMAG00000018700	mri1	100	96.884	Kryptolebias_marmoratus
ENSCVAG00000023215	mri1	100	96.884	ENSLBEG00000004998	mri1	100	96.884	Labrus_bergylta
ENSCVAG00000023215	mri1	99	68.067	ENSLACG00000006845	MRI1	100	68.067	Latimeria_chalumnae
ENSCVAG00000023215	mri1	98	61.429	ENSLAFG00000012910	MRI1	99	61.429	Loxodonta_africana
ENSCVAG00000023215	mri1	88	67.405	ENSMFAG00000044250	MRI1	100	67.405	Macaca_fascicularis
ENSCVAG00000023215	mri1	98	69.209	ENSMMUG00000018068	MRI1	96	69.209	Macaca_mulatta
ENSCVAG00000023215	mri1	98	69.209	ENSMNEG00000002628	MRI1	88	69.209	Macaca_nemestrina
ENSCVAG00000023215	mri1	98	69.492	ENSMLEG00000035138	MRI1	96	69.492	Mandrillus_leucophaeus
ENSCVAG00000023215	mri1	100	94.618	ENSMAMG00000011686	mri1	100	94.618	Mastacembelus_armatus
ENSCVAG00000023215	mri1	100	97.734	ENSMZEG00005007657	mri1	100	97.734	Maylandia_zebra
ENSCVAG00000023215	mri1	69	81.579	ENSMAUG00000003451	Mri1	93	81.579	Mesocricetus_auratus
ENSCVAG00000023215	mri1	98	68.644	ENSMICG00000031875	MRI1	96	68.644	Microcebus_murinus
ENSCVAG00000023215	mri1	99	67.507	ENSMOCG00000009591	Mri1	97	67.507	Microtus_ochrogaster
ENSCVAG00000023215	mri1	99	97.151	ENSMMOG00000021373	mri1	69	97.151	Mola_mola
ENSCVAG00000023215	mri1	98	67.232	ENSMODG00000011870	MRI1	99	67.232	Monodelphis_domestica
ENSCVAG00000023215	mri1	100	95.184	ENSMALG00000006021	mri1	100	95.184	Monopterus_albus
ENSCVAG00000023215	mri1	98	67.797	MGP_CAROLIEiJ_G0031299	Mri1	96	67.797	Mus_caroli
ENSCVAG00000023215	mri1	98	68.362	ENSMUSG00000004996	Mri1	96	68.362	Mus_musculus
ENSCVAG00000023215	mri1	98	68.555	MGP_PahariEiJ_G0022905	Mri1	96	68.555	Mus_pahari
ENSCVAG00000023215	mri1	98	68.362	MGP_SPRETEiJ_G0032417	Mri1	96	68.362	Mus_spretus
ENSCVAG00000023215	mri1	98	69.774	ENSMPUG00000003316	MRI1	99	69.774	Mustela_putorius_furo
ENSCVAG00000023215	mri1	98	70.170	ENSMLUG00000004766	MRI1	98	70.170	Myotis_lucifugus
ENSCVAG00000023215	mri1	99	66.760	ENSNGAG00000022102	Mri1	99	66.760	Nannospalax_galili
ENSCVAG00000023215	mri1	100	82.597	ENSNBRG00000023766	mri1	100	82.597	Neolamprologus_brichardi
ENSCVAG00000023215	mri1	98	70.056	ENSNLEG00000013138	MRI1	96	70.056	Nomascus_leucogenys
ENSCVAG00000023215	mri1	87	78.378	ENSMEUG00000013717	MRI1	80	78.378	Notamacropus_eugenii
ENSCVAG00000023215	mri1	52	72.973	ENSOPRG00000008859	-	100	72.973	Ochotona_princeps
ENSCVAG00000023215	mri1	60	74.766	ENSOPRG00000015475	-	99	74.766	Ochotona_princeps
ENSCVAG00000023215	mri1	96	69.653	ENSODEG00000010083	-	94	69.653	Octodon_degus
ENSCVAG00000023215	mri1	99	68.994	ENSODEG00000019755	-	98	68.994	Octodon_degus
ENSCVAG00000023215	mri1	100	97.734	ENSONIG00000017732	mri1	100	97.734	Oreochromis_niloticus
ENSCVAG00000023215	mri1	87	72.204	ENSOANG00000012399	MRI1	97	72.204	Ornithorhynchus_anatinus
ENSCVAG00000023215	mri1	98	68.927	ENSOCUG00000024840	MRI1	97	68.927	Oryctolagus_cuniculus
ENSCVAG00000023215	mri1	100	95.184	ENSORLG00000011911	mri1	100	95.184	Oryzias_latipes
ENSCVAG00000023215	mri1	100	95.184	ENSORLG00020005135	MRI1	100	95.184	Oryzias_latipes_hni
ENSCVAG00000023215	mri1	100	95.184	ENSORLG00015003701	MRI1	100	95.184	Oryzias_latipes_hsok
ENSCVAG00000023215	mri1	93	90.881	ENSOMEG00000013120	mri1	99	90.881	Oryzias_melastigma
ENSCVAG00000023215	mri1	98	69.663	ENSOGAG00000007183	MRI1	97	69.663	Otolemur_garnettii
ENSCVAG00000023215	mri1	98	61.236	ENSOARG00000008222	MRI1	96	61.236	Ovis_aries
ENSCVAG00000023215	mri1	98	61.254	ENSPPAG00000033346	MRI1	95	61.254	Pan_paniscus
ENSCVAG00000023215	mri1	98	68.644	ENSPPRG00000006539	MRI1	96	68.927	Panthera_pardus
ENSCVAG00000023215	mri1	98	68.644	ENSPTIG00000005216	MRI1	99	68.927	Panthera_tigris_altaica
ENSCVAG00000023215	mri1	98	68.927	ENSPTRG00000010563	MRI1	96	68.927	Pan_troglodytes
ENSCVAG00000023215	mri1	98	69.492	ENSPANG00000010977	MRI1	96	69.492	Papio_anubis
ENSCVAG00000023215	mri1	100	77.620	ENSPKIG00000003387	mri1	100	77.620	Paramormyrops_kingsleyae
ENSCVAG00000023215	mri1	100	95.467	ENSPMGG00000016429	mri1	100	95.467	Periophthalmus_magnuspinnatus
ENSCVAG00000023215	mri1	99	68.067	ENSPEMG00000006105	Mri1	97	68.067	Peromyscus_maniculatus_bairdii
ENSCVAG00000023215	mri1	99	62.535	ENSPMAG00000006128	mri1	99	62.535	Petromyzon_marinus
ENSCVAG00000023215	mri1	98	69.492	ENSPCIG00000019032	MRI1	99	69.492	Phascolarctos_cinereus
ENSCVAG00000023215	mri1	100	97.734	ENSPFOG00000004311	mri1	100	97.734	Poecilia_formosa
ENSCVAG00000023215	mri1	100	98.300	ENSPLAG00000010852	mri1	100	98.300	Poecilia_latipinna
ENSCVAG00000023215	mri1	100	97.734	ENSPMEG00000014113	mri1	100	97.734	Poecilia_mexicana
ENSCVAG00000023215	mri1	79	90.000	ENSPREG00000000422	mri1	81	90.000	Poecilia_reticulata
ENSCVAG00000023215	mri1	98	67.898	ENSPPYG00000010570	MRI1	96	67.898	Pongo_abelii
ENSCVAG00000023215	mri1	98	68.272	ENSPCAG00000014275	MRI1	97	68.272	Procavia_capensis
ENSCVAG00000023215	mri1	86	70.323	ENSPCOG00000021500	MRI1	95	70.323	Propithecus_coquereli
ENSCVAG00000023215	mri1	98	70.170	ENSPVAG00000006322	MRI1	96	70.170	Pteropus_vampyrus
ENSCVAG00000023215	mri1	100	97.734	ENSPNYG00000001542	mri1	100	97.734	Pundamilia_nyererei
ENSCVAG00000023215	mri1	100	91.785	ENSPNAG00000012506	mri1	100	91.785	Pygocentrus_nattereri
ENSCVAG00000023215	mri1	98	68.644	ENSRNOG00000026211	Mri1	96	68.644	Rattus_norvegicus
ENSCVAG00000023215	mri1	98	69.492	ENSRBIG00000028556	MRI1	95	57.143	Rhinopithecus_bieti
ENSCVAG00000023215	mri1	98	69.209	ENSRROG00000031188	MRI1	96	69.209	Rhinopithecus_roxellana
ENSCVAG00000023215	mri1	95	41.646	YPR118W	-	97	41.646	Saccharomyces_cerevisiae
ENSCVAG00000023215	mri1	99	57.143	ENSSBOG00000029825	-	99	57.143	Saimiri_boliviensis_boliviensis
ENSCVAG00000023215	mri1	86	68.387	ENSSBOG00000034840	-	96	68.387	Saimiri_boliviensis_boliviensis
ENSCVAG00000023215	mri1	99	67.416	ENSSHAG00000011531	MRI1	99	67.416	Sarcophilus_harrisii
ENSCVAG00000023215	mri1	88	91.613	ENSSFOG00015018651	mri1	97	91.613	Scleropages_formosus
ENSCVAG00000023215	mri1	100	97.167	ENSSMAG00000004636	mri1	100	97.167	Scophthalmus_maximus
ENSCVAG00000023215	mri1	100	97.167	ENSSDUG00000002275	mri1	100	97.167	Seriola_dumerili
ENSCVAG00000023215	mri1	100	97.167	ENSSLDG00000012900	mri1	100	97.167	Seriola_lalandi_dorsalis
ENSCVAG00000023215	mri1	98	67.797	ENSSARG00000007904	MRI1	97	67.797	Sorex_araneus
ENSCVAG00000023215	mri1	100	53.740	ENSSPUG00000002937	MRI1	99	53.740	Sphenodon_punctatus
ENSCVAG00000023215	mri1	100	97.734	ENSSPAG00000008235	mri1	100	97.734	Stegastes_partitus
ENSCVAG00000023215	mri1	98	70.621	ENSSSCG00000013756	MRI1	89	70.621	Sus_scrofa
ENSCVAG00000023215	mri1	100	96.317	ENSTRUG00000010929	mri1	100	96.317	Takifugu_rubripes
ENSCVAG00000023215	mri1	99	93.732	ENSTNIG00000014065	mri1	100	93.732	Tetraodon_nigroviridis
ENSCVAG00000023215	mri1	72	77.124	ENSTBEG00000008620	MRI1	81	77.124	Tupaia_belangeri
ENSCVAG00000023215	mri1	99	68.436	ENSTTRG00000010347	MRI1	98	68.436	Tursiops_truncatus
ENSCVAG00000023215	mri1	98	69.492	ENSUAMG00000015405	MRI1	99	69.492	Ursus_americanus
ENSCVAG00000023215	mri1	99	67.887	ENSUMAG00000004743	MRI1	99	67.887	Ursus_maritimus
ENSCVAG00000023215	mri1	65	79.487	ENSVPAG00000011144	-	60	79.487	Vicugna_pacos
ENSCVAG00000023215	mri1	98	69.492	ENSVVUG00000026734	MRI1	90	69.492	Vulpes_vulpes
ENSCVAG00000023215	mri1	98	66.387	ENSXETG00000021867	mri1	99	66.387	Xenopus_tropicalis
ENSCVAG00000023215	mri1	88	98.382	ENSXCOG00000014431	mri1	93	98.382	Xiphophorus_couchianus
ENSCVAG00000023215	mri1	100	98.017	ENSXMAG00000027505	MRI1	100	98.017	Xiphophorus_maculatus