EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSCVAG00000023240 (Gene tree)
Gene ID
107087842
Gene Symbol
atxn1a
Alias
atxn1b|si:ch211-125a6.1
Full Name
ataxin 1
Gene Type
protein_coding
Species
Cyprinodon_variegatus
Status
putative
Strand
Plus strand
Length
111094 bases
Position
chrKL652696.1:576332-687425
Accession
107087842
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSCVAP00000019817AXHPF08517.122e-4211
ENSCVAP00000019822AXHPF08517.122e-4211
ENSCVAP00000032865AXHPF08517.122e-4211
ENSCVAP00000032869AXHPF08517.122e-4211
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSCVAT00000029069-3120XM_015379627ENSCVAP00000032865786 (aa)XP_015235113UPI000742B2FA
ENSCVAT00000029061-3290XM_015379629ENSCVAP00000019817786 (aa)XP_015235115UPI000742B2FA
ENSCVAT00000029070-3238XM_015379628ENSCVAP00000019822786 (aa)XP_015235114UPI000742B2FA
ENSCVAT00000029076-3311-ENSCVAP00000032869786 (aa)-UPI000742B2FA
Gene Model
Click here to download ENSCVAG00000023240's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000023240's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSCVAG00000023240atxn1a9938.122ENSCVAG00000010945atxn1b9938.435
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSCVAG00000023240atxn1a10040.111ENSG00000124788ATXN18047.909Homo_sapiens
ENSCVAG00000023240atxn1a10076.161ENSAPOG00000018662atxn1a10075.672Acanthochromis_polyacanthus
ENSCVAG00000023240atxn1a9937.947ENSAPOG00000005003atxn1b9939.100Acanthochromis_polyacanthus
ENSCVAG00000023240atxn1a10040.961ENSAMEG00000004299ATXN110040.596Ailuropoda_melanoleuca
ENSCVAG00000023240atxn1a8994.118ENSACIG00000016088atxn1a10070.443Amphilophus_citrinellus
ENSCVAG00000023240atxn1a9938.043ENSACIG00000014661atxn1b9838.285Amphilophus_citrinellus
ENSCVAG00000023240atxn1a9937.172ENSAOCG00000019715atxn1b9938.655Amphiprion_ocellaris
ENSCVAG00000023240atxn1a10076.622ENSAOCG00000015796atxn1a10076.255Amphiprion_ocellaris
ENSCVAG00000023240atxn1a10076.838ENSAPEG00000011313atxn1a10076.471Amphiprion_percula
ENSCVAG00000023240atxn1a9937.614ENSAPEG00000022436atxn1b9939.205Amphiprion_percula
ENSCVAG00000023240atxn1a9938.584ENSATEG00000002982atxn1b9939.408Anabas_testudineus
ENSCVAG00000023240atxn1a10072.249ENSATEG00000013601atxn1a10072.005Anabas_testudineus
ENSCVAG00000023240atxn1a10041.676ENSACAG00000003919ATXN110041.375Anolis_carolinensis
ENSCVAG00000023240atxn1a9941.264ENSANAG00000025206-9541.753Aotus_nancymaae
ENSCVAG00000023240atxn1a7836.758ENSANAG00000025424-9637.300Aotus_nancymaae
ENSCVAG00000023240atxn1a10075.616ENSACLG00000015429atxn1a10075.862Astatotilapia_calliptera
ENSCVAG00000023240atxn1a9937.344ENSACLG00000005697atxn1b9937.838Astatotilapia_calliptera
ENSCVAG00000023240atxn1a10050.923ENSAMXG00000042368atxn1a10051.220Astyanax_mexicanus
ENSCVAG00000023240atxn1a9936.983ENSAMXG00000017432atxn1b9836.983Astyanax_mexicanus
ENSCVAG00000023240atxn1a10040.343ENSBTAG00000019675ATXN110040.367Bos_taurus
ENSCVAG00000023240atxn1a9941.264ENSCJAG00000006563ATXN19441.753Callithrix_jacchus
ENSCVAG00000023240atxn1a10042.123ENSCAFG00000009934ATXN110042.123Canis_familiaris
ENSCVAG00000023240atxn1a9941.895ENSCAFG00020012647ATXN19541.895Canis_lupus_dingo
ENSCVAG00000023240atxn1a10040.365ENSCHIG00000018697ATXN110039.818Capra_hircus
ENSCVAG00000023240atxn1a6058.806ENSTSYG00000000858ATXN19058.806Carlito_syrichta
ENSCVAG00000023240atxn1a10041.772ENSCAPG00000013095ATXN110041.772Cavia_aperea
ENSCVAG00000023240atxn1a10042.044ENSCPOG00000022869ATXN110042.044Cavia_porcellus
ENSCVAG00000023240atxn1a10041.628ENSCCAG00000018590ATXN110041.887Cebus_capucinus
ENSCVAG00000023240atxn1a10040.678ENSCATG00000042777ATXN110041.190Cercocebus_atys
ENSCVAG00000023240atxn1a10042.111ENSCLAG00000002212ATXN110042.393Chinchilla_lanigera
ENSCVAG00000023240atxn1a10040.770ENSCSAG00000007589ATXN110041.284Chlorocebus_sabaeus
ENSCVAG00000023240atxn1a10042.209ENSCPBG00000022373ATXN110042.093Chrysemys_picta_bellii
ENSCVAG00000023240atxn1a10040.956ENSCANG00000033673ATXN110041.475Colobus_angolensis_palliatus
ENSCVAG00000023240atxn1a10040.967ENSCGRG00001022108Atxn110041.082Cricetulus_griseus_chok1gshd
ENSCVAG00000023240atxn1a10041.347ENSCGRG00000014084Atxn110041.463Cricetulus_griseus_crigri
ENSCVAG00000023240atxn1a9941.396ENSCSEG00000004666atxn1b9941.507Cynoglossus_semilaevis
ENSCVAG00000023240atxn1a10064.826ENSCSEG00000017647atxn1a10065.186Cynoglossus_semilaevis
ENSCVAG00000023240atxn1a9939.435ENSDARG00000060862atxn1b9939.091Danio_rerio
ENSCVAG00000023240atxn1a10049.819ENSDARG00000061687atxn1a10050.180Danio_rerio
ENSCVAG00000023240atxn1a5453.364ENSDNOG00000048471ATXN16054.756Dasypus_novemcinctus
ENSCVAG00000023240atxn1a8852.239ENSDORG00000005940Atxn19452.239Dipodomys_ordii
ENSCVAG00000023240atxn1a8451.323ENSETEG00000003815ATXN18752.792Echinops_telfairi
ENSCVAG00000023240atxn1a10041.772ENSEASG00005011799ATXN110042.117Equus_asinus_asinus
ENSCVAG00000023240atxn1a10041.772ENSECAG00000009251ATXN110042.117Equus_caballus
ENSCVAG00000023240atxn1a10041.810ENSEEUG00000007120ATXN110042.361Erinaceus_europaeus
ENSCVAG00000023240atxn1a9163.043ENSELUG00000001311atxn1b7363.043Esox_lucius
ENSCVAG00000023240atxn1a9947.668ENSELUG00000003691atxn1a9648.876Esox_lucius
ENSCVAG00000023240atxn1a10040.993ENSFCAG00000011298ATXN110041.367Felis_catus
ENSCVAG00000023240atxn1a10041.935ENSFALG00000013400ATXN110042.051Ficedula_albicollis
ENSCVAG00000023240atxn1a8554.524ENSFDAG00000020905ATXN19954.524Fukomys_damarensis
ENSCVAG00000023240atxn1a9937.528ENSFHEG00000017226atxn1b9938.279Fundulus_heteroclitus
ENSCVAG00000023240atxn1a10085.393ENSFHEG00000019419atxn1a10084.519Fundulus_heteroclitus
ENSCVAG00000023240atxn1a9936.170ENSGMOG00000013508atxn1b9936.098Gadus_morhua
ENSCVAG00000023240atxn1a10042.032ENSGALG00000012709ATXN110042.032Gallus_gallus
ENSCVAG00000023240atxn1a8768.750ENSGAFG00000007295atxn1b9938.593Gambusia_affinis
ENSCVAG00000023240atxn1a10087.375ENSGAFG00000010544atxn1a10087.375Gambusia_affinis
ENSCVAG00000023240atxn1a10059.830ENSGACG00000003472atxn1a10059.660Gasterosteus_aculeatus
ENSCVAG00000023240atxn1a9938.186ENSGACG00000008747atxn1b9938.305Gasterosteus_aculeatus
ENSCVAG00000023240atxn1a10041.395ENSGAGG00000006868ATXN110042.093Gopherus_agassizii
ENSCVAG00000023240atxn1a10040.135ENSGGOG00000004169ATXN110040.636Gorilla_gorilla
ENSCVAG00000023240atxn1a9937.344ENSHBUG00000016081atxn1b9938.138Haplochromis_burtoni
ENSCVAG00000023240atxn1a10075.616ENSHBUG00000002508atxn1a10075.862Haplochromis_burtoni
ENSCVAG00000023240atxn1a10041.483ENSHGLG00000009360ATXN110041.793Heterocephalus_glaber_female
ENSCVAG00000023240atxn1a10041.483ENSHGLG00100003038ATXN110041.793Heterocephalus_glaber_male
ENSCVAG00000023240atxn1a10038.761ENSHCOG00000014835atxn1b9939.455Hippocampus_comes
ENSCVAG00000023240atxn1a10054.094ENSHCOG00000019032atxn1a10053.789Hippocampus_comes
ENSCVAG00000023240atxn1a10049.400ENSIPUG00000001402atxn110049.281Ictalurus_punctatus
ENSCVAG00000023240atxn1a9938.991ENSIPUG00000002088atxn1b9939.220Ictalurus_punctatus
ENSCVAG00000023240atxn1a10041.387ENSSTOG00000025423ATXN110041.272Ictidomys_tridecemlineatus
ENSCVAG00000023240atxn1a10041.879ENSJJAG00000000377Atxn110041.879Jaculus_jaculus
ENSCVAG00000023240atxn1a9937.712ENSKMAG00000013507atxn1b9938.540Kryptolebias_marmoratus
ENSCVAG00000023240atxn1a10075.092ENSKMAG00000007216atxn1a10074.601Kryptolebias_marmoratus
ENSCVAG00000023240atxn1a10071.795ENSLBEG00000024388atxn1a10071.551Labrus_bergylta
ENSCVAG00000023240atxn1a10038.245ENSLBEG00000024264atxn1b9938.644Labrus_bergylta
ENSCVAG00000023240atxn1a10042.435ENSLACG00000005371ATXN110042.435Latimeria_chalumnae
ENSCVAG00000023240atxn1a10048.288ENSLOCG00000002910atxn1a10049.173Lepisosteus_oculatus
ENSCVAG00000023240atxn1a10042.173ENSLAFG00000015231ATXN110042.407Loxodonta_africana
ENSCVAG00000023240atxn1a10040.611ENSMFAG00000032779ATXN110041.096Macaca_fascicularis
ENSCVAG00000023240atxn1a10040.724ENSMMUG00000002940ATXN110041.210Macaca_mulatta
ENSCVAG00000023240atxn1a10040.678ENSMNEG00000036667ATXN110041.190Macaca_nemestrina
ENSCVAG00000023240atxn1a10040.149ENSMLEG00000040480ATXN19648.333Mandrillus_leucophaeus
ENSCVAG00000023240atxn1a10073.633ENSMAMG00000014004atxn1a10073.026Mastacembelus_armatus
ENSCVAG00000023240atxn1a9938.198ENSMAMG00000011503atxn1b9938.655Mastacembelus_armatus
ENSCVAG00000023240atxn1a10075.616ENSMZEG00005003602atxn1a10075.862Maylandia_zebra
ENSCVAG00000023240atxn1a9937.344ENSMZEG00005015064atxn1b9937.950Maylandia_zebra
ENSCVAG00000023240atxn1a10040.951ENSMGAG00000003028ATXN110040.835Meleagris_gallopavo
ENSCVAG00000023240atxn1a10040.440ENSMAUG00000011491Atxn110041.020Mesocricetus_auratus
ENSCVAG00000023240atxn1a10041.561ENSMICG00000011875ATXN110042.021Microcebus_murinus
ENSCVAG00000023240atxn1a10041.580ENSMOCG00000001527Atxn110042.044Microtus_ochrogaster
ENSCVAG00000023240atxn1a10069.512ENSMMOG00000018593atxn1a10070.244Mola_mola
ENSCVAG00000023240atxn1a9938.969ENSMMOG00000002884atxn1b9938.795Mola_mola
ENSCVAG00000023240atxn1a10041.590ENSMODG00000010827ATXN110041.494Monodelphis_domestica
ENSCVAG00000023240atxn1a10071.238ENSMALG00000005209atxn1a10071.359Monopterus_albus
ENSCVAG00000023240atxn1a9938.593ENSMALG00000012137atxn1b9939.567Monopterus_albus
ENSCVAG00000023240atxn1a10041.435MGP_CAROLIEiJ_G0018479Atxn110041.088Mus_caroli
ENSCVAG00000023240atxn1a10041.435ENSMUSG00000046876Atxn110041.088Mus_musculus
ENSCVAG00000023240atxn1a10041.696MGP_PahariEiJ_G0019546Atxn110041.696Mus_pahari
ENSCVAG00000023240atxn1a10041.503MGP_SPRETEiJ_G0019357Atxn110041.503Mus_spretus
ENSCVAG00000023240atxn1a10041.961ENSMPUG00000005398ATXN110042.286Mustela_putorius_furo
ENSCVAG00000023240atxn1a10041.782ENSMLUG00000000896ATXN110042.063Myotis_lucifugus
ENSCVAG00000023240atxn1a10041.387ENSNGAG00000020481Atxn110041.088Nannospalax_galili
ENSCVAG00000023240atxn1a9938.193ENSNBRG00000014776atxn1b9839.277Neolamprologus_brichardi
ENSCVAG00000023240atxn1a10075.553ENSNBRG00000013216atxn1a10075.921Neolamprologus_brichardi
ENSCVAG00000023240atxn1a10040.452ENSNLEG00000001064ATXN110040.961Nomascus_leucogenys
ENSCVAG00000023240atxn1a9938.533ENSMEUG00000014680ATXN19638.533Notamacropus_eugenii
ENSCVAG00000023240atxn1a10041.364ENSODEG00000006297ATXN110042.039Octodon_degus
ENSCVAG00000023240atxn1a9939.256ENSONIG00000003094atxn1b9940.336Oreochromis_niloticus
ENSCVAG00000023240atxn1a9135.610ENSOANG00000011866ATXN19535.512Ornithorhynchus_anatinus
ENSCVAG00000023240atxn1a10040.553ENSOCUG00000015360ATXN110040.856Oryctolagus_cuniculus
ENSCVAG00000023240atxn1a10070.936ENSORLG00000013003atxn1a9970.197Oryzias_latipes
ENSCVAG00000023240atxn1a9938.479ENSORLG00000008288atxn1b9938.825Oryzias_latipes
ENSCVAG00000023240atxn1a9939.175ENSORLG00020013514atxn1b9939.607Oryzias_latipes_hni
ENSCVAG00000023240atxn1a10069.988ENSORLG00020006722atxn1a9969.250Oryzias_latipes_hni
ENSCVAG00000023240atxn1a9939.862ENSORLG00015019876atxn1b9939.747Oryzias_latipes_hsok
ENSCVAG00000023240atxn1a10070.111ENSORLG00015014668atxn1a9969.250Oryzias_latipes_hsok
ENSCVAG00000023240atxn1a9938.636ENSOMEG00000003259atxn1b9939.721Oryzias_melastigma
ENSCVAG00000023240atxn1a10068.850ENSOMEG00000012883atxn1a9869.630Oryzias_melastigma
ENSCVAG00000023240atxn1a9940.878ENSOGAG00000028623ATXN110041.503Otolemur_garnettii
ENSCVAG00000023240atxn1a10040.022ENSPPAG00000028993ATXN110040.632Pan_paniscus
ENSCVAG00000023240atxn1a10045.426ENSPPRG00000004547ATXN19945.426Panthera_pardus
ENSCVAG00000023240atxn1a10040.157ENSPTRG00000039250ATXN110040.883Pan_troglodytes
ENSCVAG00000023240atxn1a9940.498ENSPANG00000024249ATXN19940.940Papio_anubis
ENSCVAG00000023240atxn1a10046.822ENSPKIG00000003054atxn1a10047.317Paramormyrops_kingsleyae
ENSCVAG00000023240atxn1a10044.852ENSPKIG00000018323atxn1b10045.981Paramormyrops_kingsleyae
ENSCVAG00000023240atxn1a7737.481ENSPSIG00000007158ATXN19536.444Pelodiscus_sinensis
ENSCVAG00000023240atxn1a10052.114ENSPMGG00000022926atxn1a10052.547Periophthalmus_magnuspinnatus
ENSCVAG00000023240atxn1a9937.157ENSPMGG00000013610atxn1b9937.381Periophthalmus_magnuspinnatus
ENSCVAG00000023240atxn1a10040.115ENSPEMG00000014930Atxn110040.999Peromyscus_maniculatus_bairdii
ENSCVAG00000023240atxn1a10041.475ENSPCIG00000019413ATXN110041.570Phascolarctos_cinereus
ENSCVAG00000023240atxn1a10087.860ENSPFOG00000014422atxn1a10087.735Poecilia_formosa
ENSCVAG00000023240atxn1a10078.662ENSPLAG00000018978atxn1a10078.535Poecilia_latipinna
ENSCVAG00000023240atxn1a9937.826ENSPLAG00000018703atxn1b9937.755Poecilia_latipinna
ENSCVAG00000023240atxn1a9937.798ENSPMEG00000023723atxn1b9937.982Poecilia_mexicana
ENSCVAG00000023240atxn1a10087.359ENSPMEG00000002647atxn1a10087.234Poecilia_mexicana
ENSCVAG00000023240atxn1a10086.500ENSPREG00000008333atxn1a10086.500Poecilia_reticulata
ENSCVAG00000023240atxn1a9937.826ENSPREG00000020308atxn1b9938.286Poecilia_reticulata
ENSCVAG00000023240atxn1a10040.067ENSPPYG00000016254ATXN110040.971Pongo_abelii
ENSCVAG00000023240atxn1a6460.159ENSPCAG00000008196ATXN15060.159Procavia_capensis
ENSCVAG00000023240atxn1a10041.257ENSPCOG00000013612ATXN110041.714Propithecus_coquereli
ENSCVAG00000023240atxn1a9145.614ENSPVAG00000016937ATXN17945.614Pteropus_vampyrus
ENSCVAG00000023240atxn1a9938.313ENSPNYG00000017095atxn1b9838.590Pundamilia_nyererei
ENSCVAG00000023240atxn1a10075.493ENSPNYG00000011920atxn1a10075.739Pundamilia_nyererei
ENSCVAG00000023240atxn1a10052.421ENSPNAG00000010587atxn1a10052.906Pygocentrus_nattereri
ENSCVAG00000023240atxn1a9939.022ENSPNAG00000001226atxn1b9939.363Pygocentrus_nattereri
ENSCVAG00000023240atxn1a10041.647ENSRNOG00000016998Atxn110041.512Rattus_norvegicus
ENSCVAG00000023240atxn1a10040.495ENSRBIG00000028213ATXN110041.143Rhinopithecus_bieti
ENSCVAG00000023240atxn1a10040.724ENSRROG00000032751ATXN110041.237Rhinopithecus_roxellana
ENSCVAG00000023240atxn1a10041.284ENSSBOG00000017381-10041.887Saimiri_boliviensis_boliviensis
ENSCVAG00000023240atxn1a7535.518ENSSBOG00000030307-8835.267Saimiri_boliviensis_boliviensis
ENSCVAG00000023240atxn1a10048.375ENSSFOG00015005189atxn110049.157Scleropages_formosus
ENSCVAG00000023240atxn1a10044.844ENSSFOG00015000179atxn1b10044.804Scleropages_formosus
ENSCVAG00000023240atxn1a9938.933ENSSMAG00000019621atxn1b9938.895Scophthalmus_maximus
ENSCVAG00000023240atxn1a9973.063ENSSMAG00000007731atxn1a9472.694Scophthalmus_maximus
ENSCVAG00000023240atxn1a9937.091ENSSDUG00000006990atxn1b9938.618Seriola_dumerili
ENSCVAG00000023240atxn1a10075.639ENSSDUG00000011376atxn1a10075.274Seriola_dumerili
ENSCVAG00000023240atxn1a9937.430ENSSLDG00000016306atxn1b9938.958Seriola_lalandi_dorsalis
ENSCVAG00000023240atxn1a10075.518ENSSLDG00000013505atxn1a10075.152Seriola_lalandi_dorsalis
ENSCVAG00000023240atxn1a10040.814ENSSPUG00000016650ATXN110040.581Sphenodon_punctatus
ENSCVAG00000023240atxn1a10077.234ENSSPAG00000019849atxn1a10076.744Stegastes_partitus
ENSCVAG00000023240atxn1a9938.896ENSSPAG00000003388atxn1b9940.524Stegastes_partitus
ENSCVAG00000023240atxn1a10041.430ENSSSCG00000001065ATXN110041.657Sus_scrofa
ENSCVAG00000023240atxn1a10040.092ENSTGUG00000005986ATXN110040.207Taeniopygia_guttata
ENSCVAG00000023240atxn1a9938.851ENSTRUG00000024789atxn1b9938.882Takifugu_rubripes
ENSCVAG00000023240atxn1a10063.305ENSTRUG00000014645atxn1a10063.869Takifugu_rubripes
ENSCVAG00000023240atxn1a10062.255ENSTNIG00000005089atxn1a10062.776Tetraodon_nigroviridis
ENSCVAG00000023240atxn1a10039.068ENSTNIG00000018398atxn1b10039.062Tetraodon_nigroviridis
ENSCVAG00000023240atxn1a10040.814ENSTTRG00000014678ATXN19640.443Tursiops_truncatus
ENSCVAG00000023240atxn1a10039.863ENSUAMG00000004064ATXN110040.460Ursus_americanus
ENSCVAG00000023240atxn1a5947.808ENSUMAG00000017635-9247.808Ursus_maritimus
ENSCVAG00000023240atxn1a10042.141ENSVVUG00000003386ATXN110042.141Vulpes_vulpes
ENSCVAG00000023240atxn1a10041.455ENSXETG00000014184atxn110041.204Xenopus_tropicalis
ENSCVAG00000023240atxn1a10082.456ENSXCOG00000020061atxn1a10082.456Xiphophorus_couchianus
ENSCVAG00000023240atxn1a9938.748ENSXCOG00000019714atxn1b9839.566Xiphophorus_couchianus
ENSCVAG00000023240atxn1a9937.884ENSXMAG00000014270atxn1b9938.426Xiphophorus_maculatus
ENSCVAG00000023240atxn1a10087.500ENSXMAG00000003615atxn1a10087.500Xiphophorus_maculatus

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