EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCVAG00000023267 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Plus strand
Length: 1918 bases
Position: chrKL653611.1:196845-198762
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000019839	MMR_HSR1	PF01926.23	1.9e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000033351	-	1644	-	ENSCVAP00000019839	547 (aa)	-	-

Gene Model

Click here to download ENSCVAG00000023267's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000023267's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCVAG00000023267	-	69	35.751	ENSCVAG00000006929	-	69	35.602
ENSCVAG00000023267	-	89	46.570	ENSCVAG00000018481	-	84	46.201
ENSCVAG00000023267	-	96	41.711	ENSCVAG00000018793	-	85	41.711
ENSCVAG00000023267	-	81	41.741	ENSCVAG00000023288	-	85	45.263
ENSCVAG00000023267	-	95	47.510	ENSCVAG00000003593	-	77	47.529
ENSCVAG00000023267	-	62	40.356	ENSCVAG00000000740	-	86	44.379
ENSCVAG00000023267	-	50	36.786	ENSCVAG00000000429	-	88	36.823

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000023267	-	98	62.202	ENSAPOG00000017368	-	91	63.303	Acanthochromis_polyacanthus
ENSCVAG00000023267	-	98	65.549	ENSAPOG00000008987	-	88	63.303	Acanthochromis_polyacanthus
ENSCVAG00000023267	-	94	52.047	ENSAPOG00000009034	-	88	52.047	Acanthochromis_polyacanthus
ENSCVAG00000023267	-	50	52.030	ENSACIG00000012718	-	89	65.877	Amphilophus_citrinellus
ENSCVAG00000023267	-	96	48.211	ENSACIG00000005198	-	89	45.489	Amphilophus_citrinellus
ENSCVAG00000023267	-	98	46.607	ENSAOCG00000001095	-	83	47.500	Amphiprion_ocellaris
ENSCVAG00000023267	-	98	47.114	ENSAOCG00000022545	-	89	46.296	Amphiprion_ocellaris
ENSCVAG00000023267	-	94	52.907	ENSATEG00000011352	-	90	52.907	Anabas_testudineus
ENSCVAG00000023267	-	61	64.371	ENSATEG00000011735	-	90	64.371	Anabas_testudineus
ENSCVAG00000023267	-	88	49.156	ENSATEG00000012058	-	80	53.684	Anabas_testudineus
ENSCVAG00000023267	-	96	45.656	ENSATEG00000011336	-	81	54.987	Anabas_testudineus
ENSCVAG00000023267	-	97	47.302	ENSATEG00000011330	-	99	47.576	Anabas_testudineus
ENSCVAG00000023267	-	99	66.294	ENSACLG00000012195	-	96	66.294	Astatotilapia_calliptera
ENSCVAG00000023267	-	69	55.381	ENSACLG00000005220	-	91	55.381	Astatotilapia_calliptera
ENSCVAG00000023267	-	88	47.433	ENSACLG00000005679	-	69	53.457	Astatotilapia_calliptera
ENSCVAG00000023267	-	97	47.038	ENSACLG00000024857	-	67	56.720	Astatotilapia_calliptera
ENSCVAG00000023267	-	88	47.934	ENSACLG00000024859	-	71	47.458	Astatotilapia_calliptera
ENSCVAG00000023267	-	52	55.944	ENSACLG00000005669	-	99	55.944	Astatotilapia_calliptera
ENSCVAG00000023267	-	99	52.641	ENSACLG00000004980	-	96	52.641	Astatotilapia_calliptera
ENSCVAG00000023267	-	56	50.492	ENSAMXG00000030783	-	82	50.492	Astyanax_mexicanus
ENSCVAG00000023267	-	61	42.442	ENSAMXG00000041224	-	62	40.000	Astyanax_mexicanus
ENSCVAG00000023267	-	58	48.693	ENSDARG00000086048	si:ch211-229i14.2	90	44.267	Danio_rerio
ENSCVAG00000023267	-	86	53.282	ENSELUG00000005405	-	95	44.250	Esox_lucius
ENSCVAG00000023267	-	99	48.197	ENSELUG00000015135	-	95	40.803	Esox_lucius
ENSCVAG00000023267	-	85	53.232	ENSELUG00000015076	si:ch211-229i14.2	96	45.669	Esox_lucius
ENSCVAG00000023267	-	80	48.124	ENSFHEG00000000207	-	89	48.238	Fundulus_heteroclitus
ENSCVAG00000023267	-	99	43.219	ENSFHEG00000011334	-	92	42.857	Fundulus_heteroclitus
ENSCVAG00000023267	-	84	45.770	ENSFHEG00000019202	-	73	50.649	Fundulus_heteroclitus
ENSCVAG00000023267	-	97	46.328	ENSFHEG00000013865	-	72	52.742	Fundulus_heteroclitus
ENSCVAG00000023267	-	97	40.257	ENSGAFG00000015908	-	55	45.293	Gambusia_affinis
ENSCVAG00000023267	-	99	39.305	ENSGAFG00000001852	-	77	47.578	Gambusia_affinis
ENSCVAG00000023267	-	98	45.247	ENSGAFG00000015999	-	87	45.437	Gambusia_affinis
ENSCVAG00000023267	-	99	74.954	ENSGAFG00000015917	-	94	74.954	Gambusia_affinis
ENSCVAG00000023267	-	71	46.154	ENSGACG00000013107	-	86	46.154	Gasterosteus_aculeatus
ENSCVAG00000023267	-	97	53.846	ENSHBUG00000013269	-	90	53.846	Haplochromis_burtoni
ENSCVAG00000023267	-	63	58.790	ENSHBUG00000020633	-	92	48.545	Haplochromis_burtoni
ENSCVAG00000023267	-	87	53.958	ENSHBUG00000003015	-	82	54.375	Haplochromis_burtoni
ENSCVAG00000023267	-	62	56.342	ENSHBUG00000011672	-	83	55.172	Haplochromis_burtoni
ENSCVAG00000023267	-	99	66.853	ENSHBUG00000010247	-	96	66.853	Haplochromis_burtoni
ENSCVAG00000023267	-	56	44.211	ENSKMAG00000010851	-	94	42.364	Kryptolebias_marmoratus
ENSCVAG00000023267	-	85	48.602	ENSKMAG00000010293	-	78	52.394	Kryptolebias_marmoratus
ENSCVAG00000023267	-	63	59.649	ENSLBEG00000012647	-	86	59.649	Labrus_bergylta
ENSCVAG00000023267	-	66	58.310	ENSLBEG00000022878	-	91	58.310	Labrus_bergylta
ENSCVAG00000023267	-	55	60.204	ENSLBEG00000010625	-	90	60.204	Labrus_bergylta
ENSCVAG00000023267	-	70	62.730	ENSMAMG00000018162	si:ch211-229i14.2	84	62.730	Mastacembelus_armatus
ENSCVAG00000023267	-	68	53.743	ENSMAMG00000017884	-	69	54.011	Mastacembelus_armatus
ENSCVAG00000023267	-	50	58.182	ENSMAMG00000017906	-	63	55.911	Mastacembelus_armatus
ENSCVAG00000023267	-	95	45.269	ENSMAMG00000017849	-	68	56.486	Mastacembelus_armatus
ENSCVAG00000023267	-	98	61.639	ENSMAMG00000018175	-	88	61.639	Mastacembelus_armatus
ENSCVAG00000023267	-	96	60.113	ENSMAMG00000018170	-	96	60.113	Mastacembelus_armatus
ENSCVAG00000023267	-	71	49.471	ENSMAMG00000018061	-	92	49.206	Mastacembelus_armatus
ENSCVAG00000023267	-	52	56.690	ENSMZEG00005021732	-	85	56.690	Maylandia_zebra
ENSCVAG00000023267	-	85	47.527	ENSMZEG00005028364	-	89	47.527	Maylandia_zebra
ENSCVAG00000023267	-	50	59.489	ENSMZEG00005014235	-	93	59.489	Maylandia_zebra
ENSCVAG00000023267	-	51	52.857	ENSMZEG00005002051	-	94	52.857	Maylandia_zebra
ENSCVAG00000023267	-	59	65.049	ENSMALG00000001082	-	70	69.610	Monopterus_albus
ENSCVAG00000023267	-	69	47.340	ENSMALG00000004282	-	89	48.663	Monopterus_albus
ENSCVAG00000023267	-	86	51.168	ENSNBRG00000003245	-	67	56.283	Neolamprologus_brichardi
ENSCVAG00000023267	-	86	47.458	ENSNBRG00000014894	-	78	47.458	Neolamprologus_brichardi
ENSCVAG00000023267	-	61	50.599	ENSONIG00000000314	-	93	59.829	Oreochromis_niloticus
ENSCVAG00000023267	-	83	59.868	ENSONIG00000004482	-	94	76.518	Oreochromis_niloticus
ENSCVAG00000023267	-	69	52.243	ENSONIG00000013863	-	89	52.243	Oreochromis_niloticus
ENSCVAG00000023267	-	84	52.700	ENSONIG00000010736	-	83	57.029	Oreochromis_niloticus
ENSCVAG00000023267	-	50	61.712	ENSONIG00000014210	-	95	61.712	Oreochromis_niloticus
ENSCVAG00000023267	-	70	52.284	ENSONIG00000011313	-	97	54.737	Oreochromis_niloticus
ENSCVAG00000023267	-	69	53.281	ENSONIG00000000233	-	84	53.806	Oreochromis_niloticus
ENSCVAG00000023267	-	99	40.180	ENSORLG00000030459	-	81	46.214	Oryzias_latipes
ENSCVAG00000023267	-	86	51.368	ENSORLG00000017091	-	91	48.519	Oryzias_latipes
ENSCVAG00000023267	-	95	41.255	ENSORLG00020014225	-	80	44.703	Oryzias_latipes_hni
ENSCVAG00000023267	-	86	50.947	ENSORLG00020016100	-	93	48.148	Oryzias_latipes_hni
ENSCVAG00000023267	-	52	59.498	ENSORLG00015004505	-	75	53.298	Oryzias_latipes_hsok
ENSCVAG00000023267	-	86	51.502	ENSORLG00015006787	-	89	48.588	Oryzias_latipes_hsok
ENSCVAG00000023267	-	69	52.632	ENSOMEG00000013595	-	59	52.850	Oryzias_melastigma
ENSCVAG00000023267	-	95	42.466	ENSOMEG00000009393	-	75	47.043	Oryzias_melastigma
ENSCVAG00000023267	-	84	50.545	ENSOMEG00000007494	-	73	54.737	Oryzias_melastigma
ENSCVAG00000023267	-	99	45.438	ENSOMEG00000003632	-	96	45.246	Oryzias_melastigma
ENSCVAG00000023267	-	69	55.526	ENSPFOG00000022293	-	89	55.526	Poecilia_formosa
ENSCVAG00000023267	-	69	48.684	ENSPFOG00000001388	-	89	48.684	Poecilia_formosa
ENSCVAG00000023267	-	98	66.102	ENSPFOG00000024835	-	94	67.420	Poecilia_formosa
ENSCVAG00000023267	-	96	42.357	ENSPFOG00000000973	-	86	42.541	Poecilia_formosa
ENSCVAG00000023267	-	98	44.102	ENSPLAG00000015541	-	78	50.794	Poecilia_latipinna
ENSCVAG00000023267	-	97	43.853	ENSPMEG00000010900	-	90	44.037	Poecilia_mexicana
ENSCVAG00000023267	-	85	49.041	ENSPMEG00000002123	-	64	53.109	Poecilia_mexicana
ENSCVAG00000023267	-	99	43.739	ENSPMEG00000003917	-	92	43.091	Poecilia_mexicana
ENSCVAG00000023267	-	87	51.572	ENSPMEG00000008599	-	90	51.572	Poecilia_mexicana
ENSCVAG00000023267	-	51	58.696	ENSPREG00000016826	-	75	52.174	Poecilia_reticulata
ENSCVAG00000023267	-	99	45.155	ENSPREG00000017114	-	91	44.322	Poecilia_reticulata
ENSCVAG00000023267	-	67	49.046	ENSPREG00000006470	-	91	50.000	Poecilia_reticulata
ENSCVAG00000023267	-	91	48.692	ENSPREG00000017000	-	92	49.197	Poecilia_reticulata
ENSCVAG00000023267	-	98	55.307	ENSPREG00000017086	-	77	54.331	Poecilia_reticulata
ENSCVAG00000023267	-	62	51.940	ENSPNYG00000003568	-	92	52.473	Pundamilia_nyererei
ENSCVAG00000023267	-	87	48.847	ENSPNYG00000008493	-	83	49.476	Pundamilia_nyererei
ENSCVAG00000023267	-	59	56.522	ENSPNYG00000004195	-	78	56.522	Pundamilia_nyererei
ENSCVAG00000023267	-	94	53.714	ENSPNYG00000000712	-	93	54.352	Pundamilia_nyererei
ENSCVAG00000023267	-	97	45.725	ENSPNYG00000006913	-	92	45.880	Pundamilia_nyererei
ENSCVAG00000023267	-	87	53.878	ENSPNYG00000008570	-	81	54.298	Pundamilia_nyererei
ENSCVAG00000023267	-	55	48.495	ENSPNAG00000026011	-	68	43.272	Pygocentrus_nattereri
ENSCVAG00000023267	-	56	48.039	ENSPNAG00000003364	si:ch211-229i14.2	51	48.039	Pygocentrus_nattereri
ENSCVAG00000023267	-	98	52.273	ENSSDUG00000016624	-	78	52.239	Seriola_dumerili
ENSCVAG00000023267	-	58	57.413	ENSSDUG00000016809	-	80	57.413	Seriola_dumerili
ENSCVAG00000023267	-	97	48.582	ENSSDUG00000016851	-	90	48.582	Seriola_dumerili
ENSCVAG00000023267	-	71	52.116	ENSSDUG00000005095	-	85	54.233	Seriola_dumerili
ENSCVAG00000023267	-	52	53.287	ENSSDUG00000016459	-	92	58.298	Seriola_dumerili
ENSCVAG00000023267	-	67	68.293	ENSSDUG00000009253	-	84	68.325	Seriola_dumerili
ENSCVAG00000023267	-	85	56.897	ENSSDUG00000005270	-	76	60.630	Seriola_dumerili
ENSCVAG00000023267	-	50	59.926	ENSSDUG00000016775	-	93	59.926	Seriola_dumerili
ENSCVAG00000023267	-	97	49.365	ENSSLDG00000001533	-	100	48.687	Seriola_lalandi_dorsalis
ENSCVAG00000023267	-	52	62.455	ENSSLDG00000002339	-	99	62.455	Seriola_lalandi_dorsalis
ENSCVAG00000023267	-	57	63.889	ENSSLDG00000007022	-	82	63.889	Seriola_lalandi_dorsalis
ENSCVAG00000023267	-	50	65.818	ENSSLDG00000004233	-	89	67.729	Seriola_lalandi_dorsalis
ENSCVAG00000023267	-	60	55.319	ENSSLDG00000013126	-	92	57.751	Seriola_lalandi_dorsalis
ENSCVAG00000023267	-	96	47.514	ENSSPAG00000001386	-	81	54.872	Stegastes_partitus
ENSCVAG00000023267	-	87	53.909	ENSSPAG00000005977	-	94	55.858	Stegastes_partitus
ENSCVAG00000023267	-	97	38.919	ENSTRUG00000025882	-	52	46.092	Takifugu_rubripes
ENSCVAG00000023267	-	86	44.043	ENSTRUG00000020623	-	80	47.680	Takifugu_rubripes
ENSCVAG00000023267	-	52	54.417	ENSXCOG00000018711	-	81	60.504	Xiphophorus_couchianus
ENSCVAG00000023267	-	99	77.138	ENSXMAG00000027923	-	88	76.994	Xiphophorus_maculatus
ENSCVAG00000023267	-	96	44.118	ENSXMAG00000019889	-	89	43.517	Xiphophorus_maculatus