EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCVAG00000023293 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Plus strand
Length: 7415 bases
Position: chrKL653611.1:128249-135663
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000032898	MMR_HSR1	PF01926.23	2.5e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000029112	-	648	-	ENSCVAP00000032898	215 (aa)	-	-

Gene Model

Click here to download ENSCVAG00000023293's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000023293's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCVAG00000023293	-	60	46.154	ENSCVAG00000019639	-	65	46.154
ENSCVAG00000023293	-	67	64.138	ENSCVAG00000013717	-	66	64.138
ENSCVAG00000023293	-	53	50.000	ENSCVAG00000017220	-	68	50.000
ENSCVAG00000023293	-	71	33.333	ENSCVAG00000003054	-	52	33.333
ENSCVAG00000023293	-	67	44.275	ENSCVAG00000011321	-	63	44.275
ENSCVAG00000023293	-	71	58.974	ENSCVAG00000018895	-	71	58.974
ENSCVAG00000023293	-	64	45.652	ENSCVAG00000004346	-	58	45.652
ENSCVAG00000023293	-	71	49.342	ENSCVAG00000007463	-	50	49.342
ENSCVAG00000023293	-	68	63.946	ENSCVAG00000007827	-	54	63.946
ENSCVAG00000023293	-	81	46.369	ENSCVAG00000003302	-	67	46.369
ENSCVAG00000023293	-	67	64.828	ENSCVAG00000001601	-	58	64.384
ENSCVAG00000023293	-	67	52.778	ENSCVAG00000002876	-	50	52.778
ENSCVAG00000023293	-	67	46.575	ENSCVAG00000005762	-	51	46.575
ENSCVAG00000023293	-	68	62.162	ENSCVAG00000009295	-	61	62.162
ENSCVAG00000023293	-	67	82.639	ENSCVAG00000004890	-	60	82.639
ENSCVAG00000023293	-	61	51.145	ENSCVAG00000010232	-	54	46.711
ENSCVAG00000023293	-	61	49.231	ENSCVAG00000018802	-	58	47.917
ENSCVAG00000023293	-	68	41.333	ENSCVAG00000009825	-	54	41.333
ENSCVAG00000023293	-	62	69.173	ENSCVAG00000001617	-	55	69.173
ENSCVAG00000023293	-	67	44.805	ENSCVAG00000021126	-	56	45.161
ENSCVAG00000023293	-	76	43.373	ENSCVAG00000009848	-	82	43.373
ENSCVAG00000023293	-	68	62.838	ENSCVAG00000007737	-	66	62.838
ENSCVAG00000023293	-	85	33.784	ENSCVAG00000014831	-	71	33.784
ENSCVAG00000023293	-	65	36.429	ENSCVAG00000016807	-	64	36.429
ENSCVAG00000023293	-	67	47.222	ENSCVAG00000023434	-	53	47.222
ENSCVAG00000023293	-	67	33.566	ENSCVAG00000015638	-	58	33.566
ENSCVAG00000023293	-	67	49.650	ENSCVAG00000021672	-	69	49.650
ENSCVAG00000023293	-	73	75.000	ENSCVAG00000018769	-	68	75.000
ENSCVAG00000023293	-	66	45.455	ENSCVAG00000009808	-	61	45.455
ENSCVAG00000023293	-	69	66.667	ENSCVAG00000018876	-	68	66.667
ENSCVAG00000023293	-	61	50.382	ENSCVAG00000014872	-	56	50.382
ENSCVAG00000023293	-	67	76.552	ENSCVAG00000005473	-	52	76.552
ENSCVAG00000023293	-	67	55.245	ENSCVAG00000007454	-	56	55.245
ENSCVAG00000023293	-	68	62.162	ENSCVAG00000023285	-	59	62.162
ENSCVAG00000023293	-	69	64.000	ENSCVAG00000003277	-	70	64.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000023293	-	69	53.691	ENSACIG00000012718	-	62	53.691	Amphilophus_citrinellus
ENSCVAG00000023293	-	68	65.986	ENSAOCG00000013686	-	65	65.986	Amphiprion_ocellaris
ENSCVAG00000023293	-	67	69.655	ENSACLG00000005066	-	51	69.655	Astatotilapia_calliptera
ENSCVAG00000023293	-	67	72.603	ENSACLG00000005669	-	51	72.603	Astatotilapia_calliptera
ENSCVAG00000023293	-	69	54.730	ENSACLG00000024836	-	53	54.730	Astatotilapia_calliptera
ENSCVAG00000023293	-	86	47.826	ENSAMXG00000036745	-	67	47.826	Astyanax_mexicanus
ENSCVAG00000023293	-	67	52.448	ENSAMXG00000030826	-	69	52.448	Astyanax_mexicanus
ENSCVAG00000023293	-	71	55.705	ENSAMXG00000037741	-	61	55.705	Astyanax_mexicanus
ENSCVAG00000023293	-	70	50.331	ENSAMXG00000039685	-	63	50.331	Astyanax_mexicanus
ENSCVAG00000023293	-	84	44.324	ENSFHEG00000021828	-	79	44.324	Fundulus_heteroclitus
ENSCVAG00000023293	-	70	36.076	ENSFHEG00000007909	-	52	37.241	Fundulus_heteroclitus
ENSCVAG00000023293	-	64	33.094	ENSGMOG00000006359	-	61	33.094	Gadus_morhua
ENSCVAG00000023293	-	67	58.042	ENSGACG00000002627	-	56	58.042	Gasterosteus_aculeatus
ENSCVAG00000023293	-	67	56.552	ENSHBUG00000002999	-	51	56.552	Haplochromis_burtoni
ENSCVAG00000023293	-	68	68.919	ENSHBUG00000000157	-	53	69.388	Haplochromis_burtoni
ENSCVAG00000023293	-	67	70.548	ENSHBUG00000020672	-	68	70.548	Haplochromis_burtoni
ENSCVAG00000023293	-	73	51.592	ENSIPUG00000004131	-	50	51.592	Ictalurus_punctatus
ENSCVAG00000023293	-	70	35.849	ENSLBEG00000003708	-	54	35.849	Labrus_bergylta
ENSCVAG00000023293	-	67	68.966	ENSLBEG00000017021	-	59	68.966	Labrus_bergylta
ENSCVAG00000023293	-	76	71.429	ENSLBEG00000010625	-	57	71.429	Labrus_bergylta
ENSCVAG00000023293	-	67	61.111	ENSLBEG00000006614	-	57	61.111	Labrus_bergylta
ENSCVAG00000023293	-	69	58.784	ENSMAMG00000017874	-	57	58.784	Mastacembelus_armatus
ENSCVAG00000023293	-	67	36.538	ENSMAMG00000017590	-	85	36.538	Mastacembelus_armatus
ENSCVAG00000023293	-	69	55.405	ENSMAMG00000017892	-	51	55.405	Mastacembelus_armatus
ENSCVAG00000023293	-	77	63.473	ENSMZEG00005027848	-	77	63.473	Maylandia_zebra
ENSCVAG00000023293	-	69	69.128	ENSMZEG00005014235	-	51	69.128	Maylandia_zebra
ENSCVAG00000023293	-	67	55.944	ENSMZEG00005021721	-	51	55.944	Maylandia_zebra
ENSCVAG00000023293	-	68	65.306	ENSMZEG00005002051	-	51	65.306	Maylandia_zebra
ENSCVAG00000023293	-	65	34.899	ENSMMOG00000021314	-	60	34.899	Mola_mola
ENSCVAG00000023293	-	66	50.000	ENSMMOG00000010425	-	55	50.000	Mola_mola
ENSCVAG00000023293	-	67	55.944	ENSNBRG00000019143	-	52	55.944	Neolamprologus_brichardi
ENSCVAG00000023293	-	65	35.526	ENSONIG00000012341	-	55	35.526	Oreochromis_niloticus
ENSCVAG00000023293	-	68	58.904	ENSONIG00000004482	-	55	58.904	Oreochromis_niloticus
ENSCVAG00000023293	-	73	69.863	ENSONIG00000000314	-	58	69.863	Oreochromis_niloticus
ENSCVAG00000023293	-	68	65.986	ENSONIG00000012315	-	55	65.986	Oreochromis_niloticus
ENSCVAG00000023293	-	77	62.987	ENSONIG00000014210	-	62	62.987	Oreochromis_niloticus
ENSCVAG00000023293	-	69	53.472	ENSONIG00000013819	-	60	53.472	Oreochromis_niloticus
ENSCVAG00000023293	-	87	59.859	ENSPFOG00000000217	-	70	59.859	Poecilia_formosa
ENSCVAG00000023293	-	70	60.544	ENSPFOG00000000259	-	66	60.544	Poecilia_formosa
ENSCVAG00000023293	-	68	58.904	ENSPLAG00000000052	-	63	58.904	Poecilia_latipinna
ENSCVAG00000023293	-	56	61.667	ENSPLAG00000000053	-	69	61.667	Poecilia_latipinna
ENSCVAG00000023293	-	69	62.667	ENSPMEG00000009705	-	57	62.667	Poecilia_mexicana
ENSCVAG00000023293	-	75	63.580	ENSPNYG00000023994	-	57	63.580	Pundamilia_nyererei
ENSCVAG00000023293	-	69	60.135	ENSPNYG00000019890	-	53	60.135	Pundamilia_nyererei
ENSCVAG00000023293	-	66	71.329	ENSSMAG00000016994	-	60	71.329	Scophthalmus_maximus
ENSCVAG00000023293	-	68	47.619	ENSSDUG00000021006	-	64	47.619	Seriola_dumerili
ENSCVAG00000023293	-	68	67.347	ENSSDUG00000016612	-	70	67.347	Seriola_dumerili
ENSCVAG00000023293	-	66	51.408	ENSSDUG00000016459	-	54	51.408	Seriola_dumerili
ENSCVAG00000023293	-	71	55.556	ENSSDUG00000016791	-	55	55.556	Seriola_dumerili
ENSCVAG00000023293	-	69	61.486	ENSSLDG00000004473	-	57	62.069	Seriola_lalandi_dorsalis
ENSCVAG00000023293	-	71	54.248	ENSSLDG00000001606	-	53	54.248	Seriola_lalandi_dorsalis
ENSCVAG00000023293	-	72	53.165	ENSSLDG00000002339	-	55	53.165	Seriola_lalandi_dorsalis
ENSCVAG00000023293	-	73	57.051	ENSSLDG00000001533	-	55	57.051	Seriola_lalandi_dorsalis
ENSCVAG00000023293	-	70	61.333	ENSSLDG00000004233	-	53	61.333	Seriola_lalandi_dorsalis
ENSCVAG00000023293	-	68	56.164	ENSSLDG00000002744	-	68	56.164	Seriola_lalandi_dorsalis
ENSCVAG00000023293	-	67	71.724	ENSSLDG00000011692	-	69	71.724	Seriola_lalandi_dorsalis
ENSCVAG00000023293	-	67	58.042	ENSSPAG00000001365	-	52	58.042	Stegastes_partitus