EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSCVAG00000023307 (Gene tree)
Gene ID
107091758
Gene Symbol
-
Alias
-
Full Name
splicing factor U2AF 65 kDa subunit-like
Gene Type
protein_coding
Species
Cyprinodon_variegatus
Status
putative
Strand
Plus strand
Length
23474 bases
Position
chrKL652851.1:791947-815420
Accession
107091758
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSCVAP00000019850RRM_1PF00076.221.5e-3413
ENSCVAP00000019850RRM_1PF00076.221.5e-3423
ENSCVAP00000019850RRM_1PF00076.221.5e-3433
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSCVAT00000029111-1647XM_015385900ENSCVAP00000019850466 (aa)XP_015241386UPI000742C754
Gene Model
Click here to download ENSCVAG00000023307's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000023307's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSCVAG00000023307-6534.314ENSCVAG00000001560-6034.314
ENSCVAG00000023307-10074.735ENSCVAG00000001259u2af2a9974.894
ENSCVAG00000023307-6236.275ENSCVAG00000009386puf60b5436.275
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSCVAG00000023307-10073.191ENSG00000063244U2AF29983.333Homo_sapiens
ENSCVAG00000023307-6577.640ENSAPOG00000023155u2af2a9977.640Acanthochromis_polyacanthus
ENSCVAG00000023307-10097.639ENSAPOG00000002208-10097.639Acanthochromis_polyacanthus
ENSCVAG00000023307-7780.110ENSAMEG00000003864U2AF29876.296Ailuropoda_melanoleuca
ENSCVAG00000023307-9795.425ENSACIG00000014173-9995.425Amphilophus_citrinellus
ENSCVAG00000023307-8181.842ENSACIG00000005749u2af2a9280.808Amphilophus_citrinellus
ENSCVAG00000023307-10074.947ENSAOCG00000015571u2af2a10074.894Amphiprion_ocellaris
ENSCVAG00000023307-10098.069ENSAOCG00000003595-10098.069Amphiprion_ocellaris
ENSCVAG00000023307-9895.604ENSAPEG00000020062-9895.604Amphiprion_percula
ENSCVAG00000023307-8182.105ENSAPEG00000009376u2af2a9381.061Amphiprion_percula
ENSCVAG00000023307-9797.778ENSATEG00000020577-9997.778Anabas_testudineus
ENSCVAG00000023307-10075.687ENSATEG00000022332u2af2a9974.468Anabas_testudineus
ENSCVAG00000023307-10073.885ENSACAG00000015489U2AF29975.847Anolis_carolinensis
ENSCVAG00000023307-10070.799ENSANAG00000028042U2AF29975.207Aotus_nancymaae
ENSCVAG00000023307-10073.134ENSACLG00000022181u2af2a9974.681Astatotilapia_calliptera
ENSCVAG00000023307-10098.069ENSACLG00000020793-10098.069Astatotilapia_calliptera
ENSCVAG00000023307-10070.231ENSAMXG00000033347u2af2a9970.650Astyanax_mexicanus
ENSCVAG00000023307-10072.921ENSAMXG00000039454u2af2b9973.093Astyanax_mexicanus
ENSCVAG00000023307-10075.855ENSBTAG00000002830U2AF29976.371Bos_taurus
ENSCVAG00000023307-8357.033WBGene00006697uaf-110054.110Caenorhabditis_elegans
ENSCVAG00000023307-10072.785ENSCJAG00000017128U2AF29976.160Callithrix_jacchus
ENSCVAG00000023307-10073.191ENSCAFG00000002551U2AF29976.596Canis_familiaris
ENSCVAG00000023307-9774.242ENSCAFG00020015445U2AF29575.385Canis_lupus_dingo
ENSCVAG00000023307-8468.828ENSCHIG00000023595U2AF28768.828Capra_hircus
ENSCVAG00000023307-10072.785ENSTSYG00000007432U2AF29976.160Carlito_syrichta
ENSCVAG00000023307-8680.392ENSCAPG00000008466U2AF29876.940Cavia_aperea
ENSCVAG00000023307-10072.996ENSCPOG00000001582U2AF29976.371Cavia_porcellus
ENSCVAG00000023307-10072.785ENSCCAG00000023336U2AF29976.160Cebus_capucinus
ENSCVAG00000023307-10073.191ENSCATG00000004637U2AF29976.596Cercocebus_atys
ENSCVAG00000023307-10073.191ENSCLAG00000000596U2AF29976.596Chinchilla_lanigera
ENSCVAG00000023307-10073.191ENSCSAG00000001722U2AF29976.596Chlorocebus_sabaeus
ENSCVAG00000023307-8779.036ENSCPBG00000004485U2AF29983.333Chrysemys_picta_bellii
ENSCVAG00000023307-8370.619ENSCING00000003455-8764.653Ciona_intestinalis
ENSCVAG00000023307-8368.653ENSCSAVG00000006813-9461.978Ciona_savignyi
ENSCVAG00000023307-10067.635ENSCANG00000043845-9972.246Colobus_angolensis_palliatus
ENSCVAG00000023307-9172.664ENSCANG00000031002-9676.402Colobus_angolensis_palliatus
ENSCVAG00000023307-10070.576ENSCGRG00001007486-9971.215Cricetulus_griseus_chok1gshd
ENSCVAG00000023307-10075.855ENSCGRG00001003185-9976.160Cricetulus_griseus_chok1gshd
ENSCVAG00000023307-10070.576ENSCGRG00000018587-9971.215Cricetulus_griseus_crigri
ENSCVAG00000023307-6475.524ENSCSEG00000018709u2af2a9374.359Cynoglossus_semilaevis
ENSCVAG00000023307-10090.987ENSCSEG00000020504-9490.987Cynoglossus_semilaevis
ENSCVAG00000023307-10073.895ENSDARG00000011740u2af2b9973.895Danio_rerio
ENSCVAG00000023307-10072.281ENSDARG00000012505u2af2a9972.921Danio_rerio
ENSCVAG00000023307-9172.664ENSDNOG00000047039U2AF29676.402Dasypus_novemcinctus
ENSCVAG00000023307-10072.785ENSDORG00000003250U2af29976.160Dipodomys_ordii
ENSCVAG00000023307-8054.177FBgn0034834LS28554.177Drosophila_melanogaster
ENSCVAG00000023307-8272.423FBgn0005411U2af5010072.283Drosophila_melanogaster
ENSCVAG00000023307-8763.081ENSEBUG00000001732U2AF29459.202Eptatretus_burgeri
ENSCVAG00000023307-8971.942ENSEBUG00000010917U2AF210067.300Eptatretus_burgeri
ENSCVAG00000023307-8481.818ENSEASG00005020708U2AF28876.222Equus_asinus_asinus
ENSCVAG00000023307-10075.855ENSECAG00000010110U2AF29975.693Equus_caballus
ENSCVAG00000023307-10074.274ENSELUG00000015850u2af2a9973.222Esox_lucius
ENSCVAG00000023307-10091.202ENSELUG00000018459-10091.202Esox_lucius
ENSCVAG00000023307-10072.187ENSELUG00000022291u2af2b9971.822Esox_lucius
ENSCVAG00000023307-10072.785ENSFCAG00000011504U2AF29976.160Felis_catus
ENSCVAG00000023307-8680.392ENSFDAG00000011264U2AF29576.940Fukomys_damarensis
ENSCVAG00000023307-10074.735ENSFHEG00000016025u2af2a9974.255Fundulus_heteroclitus
ENSCVAG00000023307-10071.308ENSGMOG00000004535u2af2a9973.461Gadus_morhua
ENSCVAG00000023307-9873.913ENSGALG00000052748U2AF26575.705Gallus_gallus
ENSCVAG00000023307-10074.735ENSGAFG00000013626u2af2a8874.894Gambusia_affinis
ENSCVAG00000023307-10093.777ENSGAFG00000005628-10093.133Gambusia_affinis
ENSCVAG00000023307-10085.775ENSGACG00000014500-10084.948Gasterosteus_aculeatus
ENSCVAG00000023307-10074.145ENSGACG00000010632U2AF29974.145Gasterosteus_aculeatus
ENSCVAG00000023307-6583.333ENSGAGG00000011849U2AF29983.333Gopherus_agassizii
ENSCVAG00000023307-5573.828ENSGGOG00000036399-9673.828Gorilla_gorilla
ENSCVAG00000023307-10098.069ENSHBUG00000017424-10098.069Haplochromis_burtoni
ENSCVAG00000023307-10073.134ENSHBUG00000013935u2af2a9974.681Haplochromis_burtoni
ENSCVAG00000023307-10072.785ENSHGLG00000005889U2AF29976.160Heterocephalus_glaber_female
ENSCVAG00000023307-8680.147ENSHGLG00100004757U2AF29876.718Heterocephalus_glaber_male
ENSCVAG00000023307-10073.431ENSHCOG00000019367u2af2a9973.207Hippocampus_comes
ENSCVAG00000023307-10072.708ENSIPUG00000009077u2af29972.708Ictalurus_punctatus
ENSCVAG00000023307-10071.215ENSIPUG00000007717u2af2a9971.002Ictalurus_punctatus
ENSCVAG00000023307-10085.837ENSIPUG00000009844-10085.408Ictalurus_punctatus
ENSCVAG00000023307-10072.785ENSSTOG00000019595U2AF29976.160Ictidomys_tridecemlineatus
ENSCVAG00000023307-10072.785ENSJJAG00000017705U2af29976.160Jaculus_jaculus
ENSCVAG00000023307-10075.687ENSKMAG00000005960u2af2a9974.468Kryptolebias_marmoratus
ENSCVAG00000023307-10075.745ENSLBEG00000016162u2af2a9974.681Labrus_bergylta
ENSCVAG00000023307-9793.682ENSLBEG00000005001-9893.598Labrus_bergylta
ENSCVAG00000023307-7882.514ENSLACG00000001648U2AF29982.514Latimeria_chalumnae
ENSCVAG00000023307-5983.333ENSLOCG00000008050u2af2b8181.690Lepisosteus_oculatus
ENSCVAG00000023307-10091.202ENSLOCG00000010843-10091.202Lepisosteus_oculatus
ENSCVAG00000023307-10068.856ENSLAFG00000028496-9968.085Loxodonta_africana
ENSCVAG00000023307-10073.617ENSLAFG00000018056-9976.596Loxodonta_africana
ENSCVAG00000023307-10072.785ENSMFAG00000038383U2AF29976.160Macaca_fascicularis
ENSCVAG00000023307-10072.574ENSMMUG00000004810U2AF29975.949Macaca_mulatta
ENSCVAG00000023307-10073.191ENSMNEG00000042096U2AF29976.596Macaca_nemestrina
ENSCVAG00000023307-8680.693ENSMLEG00000032219U2AF28777.181Mandrillus_leucophaeus
ENSCVAG00000023307-10072.421ENSMAMG00000019817u2af2a9973.950Mastacembelus_armatus
ENSCVAG00000023307-10095.708ENSMAMG00000020158-10095.708Mastacembelus_armatus
ENSCVAG00000023307-10074.735ENSMZEG00005016563u2af2a9974.681Maylandia_zebra
ENSCVAG00000023307-10098.069ENSMZEG00005023318-10098.069Maylandia_zebra
ENSCVAG00000023307-8680.147ENSMAUG00000008180U2af29676.718Mesocricetus_auratus
ENSCVAG00000023307-10073.191ENSMICG00000027681U2AF29976.596Microcebus_murinus
ENSCVAG00000023307-10072.785ENSMOCG00000013214-9976.160Microtus_ochrogaster
ENSCVAG00000023307-6580.392ENSMOCG00000001018-9980.392Microtus_ochrogaster
ENSCVAG00000023307-10069.068ENSMOCG00000007227-8476.020Microtus_ochrogaster
ENSCVAG00000023307-8182.105ENSMMOG00000016600u2af2a9181.061Mola_mola
ENSCVAG00000023307-10078.170ENSMMOG00000000531-10077.292Mola_mola
ENSCVAG00000023307-10073.932ENSMALG00000009985u2af2a9974.681Monopterus_albus
ENSCVAG00000023307-10073.191MGP_CAROLIEiJ_G0029150U2af29976.596Mus_caroli
ENSCVAG00000023307-10073.191ENSMUSG00000030435U2af29983.333Mus_musculus
ENSCVAG00000023307-10073.191MGP_PahariEiJ_G0021017U2af29976.596Mus_pahari
ENSCVAG00000023307-10073.191MGP_SPRETEiJ_G0030203U2af29976.596Mus_spretus
ENSCVAG00000023307-10073.191ENSMPUG00000007135U2AF29976.596Mustela_putorius_furo
ENSCVAG00000023307-5078.333ENSMLUG00000011051-9978.333Myotis_lucifugus
ENSCVAG00000023307-10072.785ENSNGAG00000020369U2af29976.160Nannospalax_galili
ENSCVAG00000023307-9796.078ENSNBRG00000011100-9996.078Neolamprologus_brichardi
ENSCVAG00000023307-10073.134ENSNBRG00000002568u2af2a9974.681Neolamprologus_brichardi
ENSCVAG00000023307-10065.190ENSNLEG00000010562U2AF29983.333Nomascus_leucogenys
ENSCVAG00000023307-8669.307ENSMEUG00000002346U2AF29866.890Notamacropus_eugenii
ENSCVAG00000023307-9856.061ENSODEG00000009254-8365.301Octodon_degus
ENSCVAG00000023307-10067.722ENSODEG00000012729-9971.097Octodon_degus
ENSCVAG00000023307-10098.069ENSONIG00000009682-10098.069Oreochromis_niloticus
ENSCVAG00000023307-10072.881ENSONIG00000012793u2af2a9974.153Oreochromis_niloticus
ENSCVAG00000023307-10074.310ENSORLG00000011545u2af2a9973.774Oryzias_latipes
ENSCVAG00000023307-10074.310ENSORLG00020006941u2af2a9973.774Oryzias_latipes_hni
ENSCVAG00000023307-10074.310ENSORLG00015012843u2af2a9973.774Oryzias_latipes_hsok
ENSCVAG00000023307-10076.333ENSOMEG00000011386u2af2a9975.336Oryzias_melastigma
ENSCVAG00000023307-8253.470ENSOGAG00000034729-7855.858Otolemur_garnettii
ENSCVAG00000023307-10072.785ENSOGAG00000007206-9976.160Otolemur_garnettii
ENSCVAG00000023307-10069.439ENSOARG00000001091U2AF29969.895Ovis_aries
ENSCVAG00000023307-10072.785ENSPPAG00000039782U2AF29976.160Pan_paniscus
ENSCVAG00000023307-10072.785ENSPPRG00000013843U2AF29976.160Panthera_pardus
ENSCVAG00000023307-9969.444ENSPTIG00000005489U2AF28776.485Panthera_tigris_altaica
ENSCVAG00000023307-10072.785ENSPTRG00000011523U2AF29983.333Pan_troglodytes
ENSCVAG00000023307-10073.191ENSPANG00000008459U2AF29976.596Papio_anubis
ENSCVAG00000023307-10090.987ENSPKIG00000014878-10090.987Paramormyrops_kingsleyae
ENSCVAG00000023307-10072.495ENSPKIG00000024346u2af2b9974.049Paramormyrops_kingsleyae
ENSCVAG00000023307-8461.369ENSPSIG00000008014U2AF29858.442Pelodiscus_sinensis
ENSCVAG00000023307-8175.128ENSPMGG00000022980u2af2a9869.518Periophthalmus_magnuspinnatus
ENSCVAG00000023307-10072.785ENSPEMG00000007378U2af29983.333Peromyscus_maniculatus_bairdii
ENSCVAG00000023307-8177.865ENSPMAG00000004097u2af2a9872.627Petromyzon_marinus
ENSCVAG00000023307-10072.996ENSPCIG00000018013U2AF29976.371Phascolarctos_cinereus
ENSCVAG00000023307-10095.708ENSPFOG00000006433-10095.708Poecilia_formosa
ENSCVAG00000023307-10073.348ENSPFOG00000010799u2af2a10074.894Poecilia_formosa
ENSCVAG00000023307-10074.735ENSPLAG00000014365u2af2a9974.894Poecilia_latipinna
ENSCVAG00000023307-9796.000ENSPLAG00000003275-9896.000Poecilia_latipinna
ENSCVAG00000023307-9795.111ENSPMEG00000003734-9895.111Poecilia_mexicana
ENSCVAG00000023307-10074.735ENSPMEG00000002969u2af2a9974.894Poecilia_mexicana
ENSCVAG00000023307-10096.781ENSPREG00000013036-10096.575Poecilia_reticulata
ENSCVAG00000023307-10073.348ENSPREG00000008739u2af2a9974.894Poecilia_reticulata
ENSCVAG00000023307-5882.482ENSPPYG00000010429-7782.482Pongo_abelii
ENSCVAG00000023307-10059.368ENSPCAG00000014399-9962.737Procavia_capensis
ENSCVAG00000023307-8670.545ENSPCAG00000003709-9672.194Procavia_capensis
ENSCVAG00000023307-10072.785ENSPCOG00000025870U2AF29976.160Propithecus_coquereli
ENSCVAG00000023307-10072.574ENSPVAG00000004540U2AF29975.949Pteropus_vampyrus
ENSCVAG00000023307-10073.134ENSPNYG00000001438u2af2a9974.681Pundamilia_nyererei
ENSCVAG00000023307-10098.069ENSPNYG00000011605-10098.069Pundamilia_nyererei
ENSCVAG00000023307-10072.458ENSPNAG00000017620u2af2a9972.921Pygocentrus_nattereri
ENSCVAG00000023307-10073.774ENSPNAG00000027289u2af2b9974.255Pygocentrus_nattereri
ENSCVAG00000023307-10092.918ENSPNAG00000007182-10092.918Pygocentrus_nattereri
ENSCVAG00000023307-10073.191ENSRNOG00000015914U2af29976.596Rattus_norvegicus
ENSCVAG00000023307-10072.574ENSRBIG00000041018U2AF29975.949Rhinopithecus_bieti
ENSCVAG00000023307-7977.003ENSRROG00000031103-9976.716Rhinopithecus_roxellana
ENSCVAG00000023307-10070.000ENSRROG00000031238-9972.128Rhinopithecus_roxellana
ENSCVAG00000023307-10073.191ENSSBOG00000023891U2AF29976.596Saimiri_boliviensis_boliviensis
ENSCVAG00000023307-5171.731ENSSHAG00000001167U2AF26670.979Sarcophilus_harrisii
ENSCVAG00000023307-8481.313ENSSFOG00015019182u2af2b8981.313Scleropages_formosus
ENSCVAG00000023307-10091.416ENSSFOG00015003884-10091.416Scleropages_formosus
ENSCVAG00000023307-10074.160ENSSMAG00000012582u2af2a9973.830Scophthalmus_maximus
ENSCVAG00000023307-10095.708ENSSMAG00000013779-10095.708Scophthalmus_maximus
ENSCVAG00000023307-9795.445ENSSDUG00000021434-9495.445Seriola_dumerili
ENSCVAG00000023307-10074.735ENSSDUG00000009457u2af2a10074.681Seriola_dumerili
ENSCVAG00000023307-9795.445ENSSLDG00000016151-9995.445Seriola_lalandi_dorsalis
ENSCVAG00000023307-10074.735ENSSLDG00000022742u2af2a9974.681Seriola_lalandi_dorsalis
ENSCVAG00000023307-10071.849ENSSPUG00000010229U2AF29974.423Sphenodon_punctatus
ENSCVAG00000023307-10097.854ENSSPAG00000005241-10097.854Stegastes_partitus
ENSCVAG00000023307-10073.348ENSSPAG00000022519u2af2a9974.894Stegastes_partitus
ENSCVAG00000023307-10075.855ENSSSCG00000034815U2AF29976.596Sus_scrofa
ENSCVAG00000023307-8180.263ENSTRUG00000005514u2af2a9773.767Takifugu_rubripes
ENSCVAG00000023307-10074.573ENSTNIG00000008106U2AF29974.573Tetraodon_nigroviridis
ENSCVAG00000023307-10088.009ENSTNIG00000011257-10088.034Tetraodon_nigroviridis
ENSCVAG00000023307-7777.961ENSTBEG00000009104U2AF29878.771Tupaia_belangeri
ENSCVAG00000023307-10072.785ENSTTRG00000000987U2AF29976.160Tursiops_truncatus
ENSCVAG00000023307-8481.818ENSUAMG00000019883U2AF29975.831Ursus_americanus
ENSCVAG00000023307-8481.818ENSUMAG00000024586U2AF29983.333Ursus_maritimus
ENSCVAG00000023307-8680.693ENSVVUG00000006956U2AF26577.181Vulpes_vulpes
ENSCVAG00000023307-10074.004ENSXETG00000019128u2af29974.059Xenopus_tropicalis
ENSCVAG00000023307-8182.105ENSXCOG00000019406u2af2a9975.336Xiphophorus_couchianus
ENSCVAG00000023307-10074.735ENSXMAG00000011979u2af2a9974.894Xiphophorus_maculatus
ENSCVAG00000023307-10096.781ENSXMAG00000000768-9696.781Xiphophorus_maculatus

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