EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCVAG00000023371 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Plus strand
Length: 9457 bases
Position: chrKL652923.1:180511-189967
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000019948	zf-C2H2	PF00096.26	3.7e-11	1	2
ENSCVAP00000019948	zf-C2H2	PF00096.26	3.7e-11	2	2
ENSCVAP00000019948	zf-met	PF12874.7	0.00024	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000015651	-	438	-	ENSCVAP00000019948	145 (aa)	-	-

Gene Model

Click here to download ENSCVAG00000023371's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000023371's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCVAG00000023371	-	83	57.895	ENSCVAG00000012216	-	99	57.895
ENSCVAG00000023371	-	63	61.404	ENSCVAG00000012399	-	87	61.404
ENSCVAG00000023371	-	72	50.877	ENSCVAG00000003417	-	70	50.877
ENSCVAG00000023371	-	74	63.158	ENSCVAG00000021107	-	94	63.158
ENSCVAG00000023371	-	66	54.386	ENSCVAG00000002295	-	70	54.386
ENSCVAG00000023371	-	70	55.357	ENSCVAG00000008200	-	85	55.357
ENSCVAG00000023371	-	67	56.140	ENSCVAG00000006673	-	54	56.140
ENSCVAG00000023371	-	75	53.061	ENSCVAG00000002500	-	89	53.061
ENSCVAG00000023371	-	72	73.684	ENSCVAG00000020155	-	80	73.684
ENSCVAG00000023371	-	62	55.172	ENSCVAG00000019705	-	67	55.172
ENSCVAG00000023371	-	70	56.061	ENSCVAG00000003250	-	53	56.061
ENSCVAG00000023371	-	63	52.632	ENSCVAG00000018485	-	83	52.632
ENSCVAG00000023371	-	70	59.649	ENSCVAG00000001444	-	94	59.649
ENSCVAG00000023371	-	51	53.488	ENSCVAG00000020938	-	92	53.488
ENSCVAG00000023371	-	71	54.386	ENSCVAG00000006653	-	54	54.386
ENSCVAG00000023371	-	58	64.912	ENSCVAG00000002252	-	88	64.912
ENSCVAG00000023371	-	69	67.647	ENSCVAG00000017890	-	87	64.103
ENSCVAG00000023371	-	87	57.812	ENSCVAG00000023054	-	59	57.812
ENSCVAG00000023371	-	81	56.604	ENSCVAG00000001609	-	73	56.604
ENSCVAG00000023371	-	63	59.322	ENSCVAG00000022174	-	51	59.322
ENSCVAG00000023371	-	63	58.621	ENSCVAG00000014734	-	89	58.621
ENSCVAG00000023371	-	70	58.621	ENSCVAG00000016181	-	91	58.621
ENSCVAG00000023371	-	83	56.897	ENSCVAG00000012543	-	97	56.897
ENSCVAG00000023371	-	92	59.649	ENSCVAG00000013337	-	91	63.158
ENSCVAG00000023371	-	50	63.158	ENSCVAG00000000227	-	70	63.158
ENSCVAG00000023371	-	71	50.877	ENSCVAG00000007169	-	50	50.877
ENSCVAG00000023371	-	77	62.069	ENSCVAG00000007073	-	73	62.069
ENSCVAG00000023371	-	72	51.724	ENSCVAG00000011235	-	76	51.724
ENSCVAG00000023371	-	74	52.542	ENSCVAG00000011334	-	79	52.542
ENSCVAG00000023371	-	66	63.793	ENSCVAG00000012302	-	83	63.793
ENSCVAG00000023371	-	71	57.895	ENSCVAG00000019537	-	77	57.895
ENSCVAG00000023371	-	71	57.895	ENSCVAG00000014404	-	90	57.895
ENSCVAG00000023371	-	69	57.895	ENSCVAG00000012248	-	87	57.895
ENSCVAG00000023371	-	69	56.250	ENSCVAG00000003512	-	85	56.250
ENSCVAG00000023371	-	61	52.632	ENSCVAG00000003434	-	69	52.632
ENSCVAG00000023371	-	74	50.000	ENSCVAG00000003433	-	86	50.000
ENSCVAG00000023371	-	53	58.621	ENSCVAG00000019764	-	59	58.621
ENSCVAG00000023371	-	88	55.263	ENSCVAG00000014322	-	71	55.263
ENSCVAG00000023371	-	57	56.897	ENSCVAG00000016964	-	80	56.897
ENSCVAG00000023371	-	80	49.123	ENSCVAG00000004382	-	81	49.123
ENSCVAG00000023371	-	74	56.140	ENSCVAG00000003497	-	78	56.140
ENSCVAG00000023371	-	57	56.897	ENSCVAG00000000144	-	55	56.897
ENSCVAG00000023371	-	75	50.943	ENSCVAG00000003514	-	75	50.943
ENSCVAG00000023371	-	84	57.895	ENSCVAG00000012180	-	93	57.895
ENSCVAG00000023371	-	67	60.345	ENSCVAG00000012228	-	79	60.345
ENSCVAG00000023371	-	64	56.897	ENSCVAG00000003428	-	96	56.897
ENSCVAG00000023371	-	72	56.140	ENSCVAG00000006491	-	60	56.140
ENSCVAG00000023371	-	64	57.143	ENSCVAG00000011213	-	61	57.143
ENSCVAG00000023371	-	52	55.172	ENSCVAG00000003601	ZNF319	57	55.172
ENSCVAG00000023371	-	71	51.899	ENSCVAG00000002833	-	65	51.899
ENSCVAG00000023371	-	66	57.895	ENSCVAG00000001568	-	67	57.895
ENSCVAG00000023371	-	57	60.345	ENSCVAG00000013382	-	60	60.345
ENSCVAG00000023371	-	86	56.140	ENSCVAG00000012284	-	79	56.140
ENSCVAG00000023371	-	60	62.069	ENSCVAG00000009827	-	96	62.069
ENSCVAG00000023371	-	58	61.404	ENSCVAG00000019767	-	52	61.404
ENSCVAG00000023371	-	70	57.500	ENSCVAG00000006389	-	92	62.069
ENSCVAG00000023371	-	78	62.069	ENSCVAG00000010442	-	95	62.069
ENSCVAG00000023371	-	67	58.621	ENSCVAG00000005507	-	95	58.621
ENSCVAG00000023371	-	77	62.069	ENSCVAG00000007051	-	97	62.069
ENSCVAG00000023371	-	74	57.895	ENSCVAG00000008836	-	62	52.941
ENSCVAG00000023371	-	80	58.333	ENSCVAG00000016796	-	82	56.140
ENSCVAG00000023371	-	69	66.667	ENSCVAG00000012520	-	67	66.667
ENSCVAG00000023371	-	79	52.632	ENSCVAG00000004368	-	69	52.632
ENSCVAG00000023371	-	75	63.793	ENSCVAG00000022991	-	89	67.647
ENSCVAG00000023371	-	68	59.649	ENSCVAG00000020414	-	51	59.649
ENSCVAG00000023371	-	61	62.069	ENSCVAG00000011469	-	74	62.069
ENSCVAG00000023371	-	74	49.123	ENSCVAG00000003396	-	61	49.123
ENSCVAG00000023371	-	58	62.069	ENSCVAG00000005494	-	87	62.069

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000023371	-	52	61.404	ENSHBUG00000009941	-	54	61.404	Haplochromis_burtoni
ENSCVAG00000023371	-	52	76.056	ENSMMOG00000011435	-	63	76.056	Mola_mola
ENSCVAG00000023371	-	58	42.667	ENSORLG00020006820	-	61	42.667	Oryzias_latipes_hni
ENSCVAG00000023371	-	52	61.404	ENSPNYG00000011973	-	77	61.404	Pundamilia_nyererei
ENSCVAG00000023371	-	76	86.207	ENSPNAG00000015513	si:dkey-210j14.3	97	86.207	Pygocentrus_nattereri
ENSCVAG00000023371	-	66	70.103	ENSXCOG00000010950	si:dkey-210j14.3	54	70.103	Xiphophorus_couchianus