EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCVAG00000023372 (Gene tree)
Gene ID: 107093416
Gene Symbol: -
Alias: -
Full Name: zinc finger protein 502-like
Gene Type: protein_coding
Species: Cyprinodon_variegatus
Status: putative
Strand: Minus strand
Length: 5269 bases
Position: chrKL652923.1:186020-191288
Accession: 107093416
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCVAP00000019949	zf-C2H2	PF00096.26	2.9e-16	1	4
ENSCVAP00000019949	zf-C2H2	PF00096.26	2.9e-16	2	4
ENSCVAP00000019949	zf-C2H2	PF00096.26	2.9e-16	3	4
ENSCVAP00000019949	zf-C2H2	PF00096.26	2.9e-16	4	4
ENSCVAP00000019949	zf-met	PF12874.7	9.6e-08	1	3
ENSCVAP00000019949	zf-met	PF12874.7	9.6e-08	2	3
ENSCVAP00000019949	zf-met	PF12874.7	9.6e-08	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCVAT00000015652	-	1686	XM_015388461	ENSCVAP00000019949	454 (aa)	XP_015243947	UPI000742AF7E

Gene Model

Click here to download ENSCVAG00000023372's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCVAG00000023372's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCVAG00000023372	-	56	43.066	ENSCVAG00000014322	-	95	43.066
ENSCVAG00000023372	-	56	39.264	ENSCVAG00000011469	-	67	41.727
ENSCVAG00000023372	-	64	42.553	ENSCVAG00000006389	-	94	41.270
ENSCVAG00000023372	-	57	37.956	ENSCVAG00000022991	-	95	36.496
ENSCVAG00000023372	-	53	44.860	ENSCVAG00000014404	-	91	45.238
ENSCVAG00000023372	-	51	41.912	ENSCVAG00000001369	-	72	41.176
ENSCVAG00000023372	-	54	38.849	ENSCVAG00000012302	-	87	38.849
ENSCVAG00000023372	-	63	39.310	ENSCVAG00000002295	-	70	43.902
ENSCVAG00000023372	-	52	34.921	ENSCVAG00000003434	-	68	35.838
ENSCVAG00000023372	-	60	43.750	ENSCVAG00000011334	-	94	43.750
ENSCVAG00000023372	-	50	39.416	ENSCVAG00000017890	-	87	56.897
ENSCVAG00000023372	-	52	37.500	ENSCVAG00000021107	-	95	49.398
ENSCVAG00000023372	-	55	39.130	ENSCVAG00000012228	-	76	39.130
ENSCVAG00000023372	-	50	34.932	ENSCVAG00000020968	-	51	44.872
ENSCVAG00000023372	-	52	37.681	ENSCVAG00000023054	-	55	42.991
ENSCVAG00000023372	-	56	40.580	ENSCVAG00000003514	-	76	40.580
ENSCVAG00000023372	-	57	40.690	ENSCVAG00000010442	-	96	45.238
ENSCVAG00000023372	-	50	45.255	ENSCVAG00000006673	-	68	45.255

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCVAG00000023372	-	95	33.846	ENSELUG00000011316	-	92	33.850	Esox_lucius