EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000000887 (Gene tree)
Gene ID: 405758
Gene Symbol: zgc:56699
Alias: fk52a03|wu:fk52a03
Full Name: zgc:56699
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Plus strand
Length: 6407 bases
Position: chr23:32101202-32107608
Accession: ZDB-GENE-040426-2099
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000001807	zf-U11-48K	PF05253.12	1.7e-20	1	2
ENSDARP00000001807	zf-U11-48K	PF05253.12	1.7e-20	2	2
ENSDARP00000122030	zf-U11-48K	PF05253.12	1.7e-20	1	2
ENSDARP00000122030	zf-U11-48K	PF05253.12	1.7e-20	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000138849	-	1275	-	ENSDARP00000122030	182 (aa)	-	Q7ZUF8
ENSDART00000000992	-	1033	-	ENSDARP00000001807	182 (aa)	-	Q7ZUF8
ENSDART00000138156	-	786	-	-	- (aa)	-	-

Gene Model

Click here to download ENSDARG00000000887's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000000887's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDARG00000000887	zgc:56699	82	50.649	ENSDARG00000099586	CR382383.2	85	50.649

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000000887	zgc:56699	99	48.333	ENSAPOG00000021951	-	98	48.333	Acanthochromis_polyacanthus
ENSDARG00000000887	zgc:56699	78	48.592	ENSAPOG00000000311	-	79	48.592	Acanthochromis_polyacanthus
ENSDARG00000000887	zgc:56699	84	52.597	ENSACIG00000013400	zgc:56699	86	52.597	Amphilophus_citrinellus
ENSDARG00000000887	zgc:56699	99	50.829	ENSAOCG00000013650	-	98	50.829	Amphiprion_ocellaris
ENSDARG00000000887	zgc:56699	99	44.444	ENSAPEG00000006689	zgc:56699	97	44.444	Amphiprion_percula
ENSDARG00000000887	zgc:56699	98	51.381	ENSATEG00000024058	zgc:56699	96	51.381	Anabas_testudineus
ENSDARG00000000887	zgc:56699	98	45.055	ENSACLG00000023562	zgc:56699	89	45.055	Astatotilapia_calliptera
ENSDARG00000000887	zgc:56699	99	66.667	ENSAMXG00000038346	zgc:56699	99	66.667	Astyanax_mexicanus
ENSDARG00000000887	zgc:56699	82	57.419	ENSAMXG00000036095	-	64	57.419	Astyanax_mexicanus
ENSDARG00000000887	zgc:56699	96	49.714	ENSCSEG00000021520	zgc:56699	80	49.714	Cynoglossus_semilaevis
ENSDARG00000000887	zgc:56699	80	48.966	ENSCVAG00000009972	zgc:56699	74	48.966	Cyprinodon_variegatus
ENSDARG00000000887	zgc:56699	63	45.299	ENSEBUG00000005577	-	62	44.915	Eptatretus_burgeri
ENSDARG00000000887	zgc:56699	100	58.152	ENSELUG00000003242	gtsf1	100	58.152	Esox_lucius
ENSDARG00000000887	zgc:56699	98	47.778	ENSFHEG00000006036	zgc:56699	95	41.341	Fundulus_heteroclitus
ENSDARG00000000887	zgc:56699	81	47.973	ENSGMOG00000007295	zgc:56699	98	47.973	Gadus_morhua
ENSDARG00000000887	zgc:56699	65	45.161	ENSGALG00000035365	-	70	45.161	Gallus_gallus
ENSDARG00000000887	zgc:56699	99	49.727	ENSGAFG00000020743	zgc:56699	97	49.727	Gambusia_affinis
ENSDARG00000000887	zgc:56699	98	45.055	ENSHBUG00000005327	zgc:56699	97	45.055	Haplochromis_burtoni
ENSDARG00000000887	zgc:56699	99	43.094	ENSHCOG00000010296	-	100	43.094	Hippocampus_comes
ENSDARG00000000887	zgc:56699	100	54.645	ENSIPUG00000011498	zgc:56699	96	54.645	Ictalurus_punctatus
ENSDARG00000000887	zgc:56699	98	51.111	ENSLBEG00000015981	zgc:56699	98	43.333	Labrus_bergylta
ENSDARG00000000887	zgc:56699	80	53.425	ENSLOCG00000004469	zgc:56699	99	53.425	Lepisosteus_oculatus
ENSDARG00000000887	zgc:56699	99	48.066	ENSMAMG00000001846	zgc:56699	97	48.066	Mastacembelus_armatus
ENSDARG00000000887	zgc:56699	98	45.055	ENSMZEG00005026479	zgc:56699	89	45.055	Maylandia_zebra
ENSDARG00000000887	zgc:56699	98	44.809	ENSMMOG00000017331	zgc:56699	96	44.809	Mola_mola
ENSDARG00000000887	zgc:56699	98	46.154	ENSNBRG00000006336	zgc:56699	97	46.154	Neolamprologus_brichardi
ENSDARG00000000887	zgc:56699	98	45.604	ENSONIG00000016720	zgc:56699	89	45.604	Oreochromis_niloticus
ENSDARG00000000887	zgc:56699	59	39.091	ENSOANG00000030381	-	73	39.091	Ornithorhynchus_anatinus
ENSDARG00000000887	zgc:56699	62	50.893	ENSORLG00000025877	-	69	50.893	Oryzias_latipes
ENSDARG00000000887	zgc:56699	97	45.506	ENSORLG00000015258	-	94	45.506	Oryzias_latipes
ENSDARG00000000887	zgc:56699	97	46.067	ENSORLG00020010990	-	94	46.067	Oryzias_latipes_hni
ENSDARG00000000887	zgc:56699	62	50.893	ENSORLG00020011013	-	69	50.893	Oryzias_latipes_hni
ENSDARG00000000887	zgc:56699	97	44.382	ENSORLG00015004961	zgc:56699	94	44.382	Oryzias_latipes_hsok
ENSDARG00000000887	zgc:56699	81	51.020	ENSOMEG00000013200	-	91	51.020	Oryzias_melastigma
ENSDARG00000000887	zgc:56699	98	42.458	ENSOMEG00000021773	-	96	42.458	Oryzias_melastigma
ENSDARG00000000887	zgc:56699	97	48.295	ENSOMEG00000021739	-	94	48.295	Oryzias_melastigma
ENSDARG00000000887	zgc:56699	100	55.789	ENSPKIG00000017039	zgc:56699	100	55.789	Paramormyrops_kingsleyae
ENSDARG00000000887	zgc:56699	99	45.405	ENSPMGG00000023241	zgc:56699	96	45.405	Periophthalmus_magnuspinnatus
ENSDARG00000000887	zgc:56699	66	36.434	ENSPMAG00000009653	-	100	36.434	Petromyzon_marinus
ENSDARG00000000887	zgc:56699	99	46.995	ENSPFOG00000009204	zgc:56699	97	47.541	Poecilia_formosa
ENSDARG00000000887	zgc:56699	99	45.902	ENSPLAG00000009088	zgc:56699	97	46.448	Poecilia_latipinna
ENSDARG00000000887	zgc:56699	99	46.995	ENSPMEG00000001443	zgc:56699	97	47.541	Poecilia_mexicana
ENSDARG00000000887	zgc:56699	99	48.087	ENSPREG00000000745	zgc:56699	97	48.087	Poecilia_reticulata
ENSDARG00000000887	zgc:56699	98	45.055	ENSPNYG00000002811	zgc:56699	97	45.055	Pundamilia_nyererei
ENSDARG00000000887	zgc:56699	100	64.481	ENSPNAG00000005165	zgc:56699	100	64.481	Pygocentrus_nattereri
ENSDARG00000000887	zgc:56699	99	48.333	ENSSFOG00015021600	zgc:56699	98	48.333	Scleropages_formosus
ENSDARG00000000887	zgc:56699	98	49.724	ENSSMAG00000020886	zgc:56699	95	49.724	Scophthalmus_maximus
ENSDARG00000000887	zgc:56699	98	49.721	ENSSDUG00000002033	zgc:56699	96	49.721	Seriola_dumerili
ENSDARG00000000887	zgc:56699	98	49.162	ENSSLDG00000014113	zgc:56699	96	49.162	Seriola_lalandi_dorsalis
ENSDARG00000000887	zgc:56699	84	54.487	ENSSPAG00000010005	-	97	54.487	Stegastes_partitus
ENSDARG00000000887	zgc:56699	99	49.171	ENSSPAG00000019854	-	98	50.829	Stegastes_partitus
ENSDARG00000000887	zgc:56699	98	45.109	ENSTRUG00000015537	zgc:56699	96	45.109	Takifugu_rubripes
ENSDARG00000000887	zgc:56699	82	46.667	ENSTNIG00000012515	zgc:56699	97	46.667	Tetraodon_nigroviridis
ENSDARG00000000887	zgc:56699	99	45.856	ENSXCOG00000014400	zgc:56699	86	45.856	Xiphophorus_couchianus
ENSDARG00000000887	zgc:56699	99	49.180	ENSXMAG00000011692	zgc:56699	97	49.180	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0005575	cellular_component	-	ND	Component