EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000000935 (Gene tree)
Gene ID: 393205
Gene Symbol: unk
Alias: zc3h5|zc3hdc5|zgc:55407
Full Name: unkempt family zinc finger
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Plus strand
Length: 55717 bases
Position: chr12:36416173-36471889
Accession: ZDB-GENE-040426-707
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000115842	zf-CCCH	PF00642.24	6.6e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000190278	-	5154	-	ENSDARP00000152106	249 (aa)	-	A0A2R8QIP8
ENSDART00000131300	-	3262	-	ENSDARP00000115842	777 (aa)	-	F1Q639
ENSDART00000137254	-	400	-	-	- (aa)	-	-

Gene Model

Click here to download ENSDARG00000000935's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000000935's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSDARG00000000935	unk	88	76.038	ENSDARG00000037838	unkl	98	47.342

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000000935	unk	94	59.770	ENSG00000132478	UNK	68	87.234	Homo_sapiens
ENSDARG00000000935	unk	94	59.515	ENSAMEG00000009769	UNK	88	58.238	Ailuropoda_melanoleuca
ENSDARG00000000935	unk	99	73.153	ENSATEG00000004212	unk	95	74.103	Anabas_testudineus
ENSDARG00000000935	unk	93	58.634	ENSAPLG00000014891	UNK	99	57.345	Anas_platyrhynchos
ENSDARG00000000935	unk	96	57.160	ENSACAG00000007303	UNK	98	56.366	Anolis_carolinensis
ENSDARG00000000935	unk	94	58.503	ENSANAG00000017139	UNK	96	57.234	Aotus_nancymaae
ENSDARG00000000935	unk	59	79.060	ENSAMXG00000031804	unk	57	78.914	Astyanax_mexicanus
ENSDARG00000000935	unk	94	59.515	ENSBTAG00000016287	UNK	96	58.493	Bos_taurus
ENSDARG00000000935	unk	94	58.503	ENSCJAG00000014056	UNK	96	57.234	Callithrix_jacchus
ENSDARG00000000935	unk	94	59.770	ENSCAFG00000004925	UNK	88	58.748	Canis_familiaris
ENSDARG00000000935	unk	94	60.026	ENSCAFG00020004454	UNK	96	58.748	Canis_lupus_dingo
ENSDARG00000000935	unk	94	59.387	ENSCHIG00000015385	UNK	96	58.365	Capra_hircus
ENSDARG00000000935	unk	94	59.642	ENSTSYG00000008096	UNK	96	58.365	Carlito_syrichta
ENSDARG00000000935	unk	92	59.388	ENSCAPG00000008657	UNK	94	58.207	Cavia_aperea
ENSDARG00000000935	unk	94	59.898	ENSCPOG00000012679	UNK	96	58.238	Cavia_porcellus
ENSDARG00000000935	unk	94	58.503	ENSCCAG00000031100	UNK	96	57.234	Cebus_capucinus
ENSDARG00000000935	unk	94	59.770	ENSCATG00000038041	UNK	96	58.748	Cercocebus_atys
ENSDARG00000000935	unk	94	59.642	ENSCLAG00000008106	UNK	96	58.621	Chinchilla_lanigera
ENSDARG00000000935	unk	94	59.770	ENSCSAG00000004859	UNK	96	58.748	Chlorocebus_sabaeus
ENSDARG00000000935	unk	94	56.289	ENSCPBG00000028046	UNK	99	56.692	Chrysemys_picta_bellii
ENSDARG00000000935	unk	94	59.770	ENSCANG00000033795	UNK	96	58.493	Colobus_angolensis_palliatus
ENSDARG00000000935	unk	94	59.694	ENSCGRG00001024874	Unk	96	58.546	Cricetulus_griseus_chok1gshd
ENSDARG00000000935	unk	94	59.719	ENSCGRG00000008631	Unk	96	58.546	Cricetulus_griseus_crigri
ENSDARG00000000935	unk	94	73.698	ENSCSEG00000020209	unk	95	74.335	Cynoglossus_semilaevis
ENSDARG00000000935	unk	94	60.204	ENSDNOG00000038145	UNK	85	58.748	Dasypus_novemcinctus
ENSDARG00000000935	unk	94	60.664	ENSDORG00000008133	Unk	96	59.566	Dipodomys_ordii
ENSDARG00000000935	unk	69	57.983	ENSETEG00000019640	UNK	96	57.647	Echinops_telfairi
ENSDARG00000000935	unk	94	59.898	ENSEASG00005002430	UNK	96	58.621	Equus_asinus_asinus
ENSDARG00000000935	unk	94	59.898	ENSECAG00000024672	UNK	99	58.073	Equus_caballus
ENSDARG00000000935	unk	81	88.636	ENSEEUG00000013779	UNK	83	88.636	Erinaceus_europaeus
ENSDARG00000000935	unk	95	72.946	ENSELUG00000023290	unk	95	73.004	Esox_lucius
ENSDARG00000000935	unk	94	60.026	ENSFCAG00000005757	UNK	96	58.748	Felis_catus
ENSDARG00000000935	unk	98	56.053	ENSFALG00000001035	UNK	94	56.978	Ficedula_albicollis
ENSDARG00000000935	unk	92	58.854	ENSFDAG00000009316	UNK	94	57.682	Fukomys_damarensis
ENSDARG00000000935	unk	82	83.758	ENSGMOG00000014314	unk	80	84.127	Gadus_morhua
ENSDARG00000000935	unk	94	56.413	ENSGALG00000002278	UNK	97	57.320	Gallus_gallus
ENSDARG00000000935	unk	94	56.149	ENSGAGG00000007411	UNK	98	57.355	Gopherus_agassizii
ENSDARG00000000935	unk	94	59.770	ENSGGOG00000009203	UNK	96	58.493	Gorilla_gorilla
ENSDARG00000000935	unk	94	59.770	ENSHGLG00000007512	UNK	96	58.621	Heterocephalus_glaber_female
ENSDARG00000000935	unk	94	59.770	ENSHGLG00100002318	UNK	96	58.621	Heterocephalus_glaber_male
ENSDARG00000000935	unk	100	79.615	ENSIPUG00000004291	UNK	96	79.122	Ictalurus_punctatus
ENSDARG00000000935	unk	89	60.431	ENSSTOG00000013344	UNK	97	59.085	Ictidomys_tridecemlineatus
ENSDARG00000000935	unk	94	59.518	ENSJJAG00000009816	Unk	97	57.683	Jaculus_jaculus
ENSDARG00000000935	unk	96	56.258	ENSLACG00000014044	UNK	96	55.752	Latimeria_chalumnae
ENSDARG00000000935	unk	94	66.623	ENSLOCG00000011578	unk	99	63.985	Lepisosteus_oculatus
ENSDARG00000000935	unk	94	60.000	ENSLAFG00000022662	UNK	96	58.726	Loxodonta_africana
ENSDARG00000000935	unk	94	59.770	ENSMFAG00000037148	UNK	96	58.748	Macaca_fascicularis
ENSDARG00000000935	unk	94	59.770	ENSMMUG00000013646	UNK	96	58.748	Macaca_mulatta
ENSDARG00000000935	unk	94	59.770	ENSMNEG00000036240	UNK	96	58.748	Macaca_nemestrina
ENSDARG00000000935	unk	94	59.770	ENSMLEG00000043327	UNK	96	58.748	Mandrillus_leucophaeus
ENSDARG00000000935	unk	99	73.177	ENSMAMG00000001390	unk	95	73.745	Mastacembelus_armatus
ENSDARG00000000935	unk	93	56.138	ENSMGAG00000004713	UNK	99	55.371	Meleagris_gallopavo
ENSDARG00000000935	unk	94	59.898	ENSMAUG00000011025	Unk	96	58.748	Mesocricetus_auratus
ENSDARG00000000935	unk	94	59.004	ENSMICG00000007591	UNK	96	57.727	Microcebus_murinus
ENSDARG00000000935	unk	94	59.898	ENSMOCG00000021657	Unk	96	58.748	Microtus_ochrogaster
ENSDARG00000000935	unk	94	76.685	ENSMMOG00000004874	unk	95	76.810	Mola_mola
ENSDARG00000000935	unk	94	60.207	ENSMODG00000007684	UNK	85	58.915	Monodelphis_domestica
ENSDARG00000000935	unk	94	59.642	MGP_CAROLIEiJ_G0017427	Unk	96	58.621	Mus_caroli
ENSDARG00000000935	unk	94	59.770	ENSMUSG00000020770	Unk	96	58.621	Mus_musculus
ENSDARG00000000935	unk	94	60.026	MGP_PahariEiJ_G0018556	Unk	96	58.862	Mus_pahari
ENSDARG00000000935	unk	94	59.642	MGP_SPRETEiJ_G0018272	Unk	96	58.493	Mus_spretus
ENSDARG00000000935	unk	94	59.848	ENSMPUG00000013806	UNK	96	58.577	Mustela_putorius_furo
ENSDARG00000000935	unk	94	60.026	ENSMLUG00000015453	UNK	96	58.748	Myotis_lucifugus
ENSDARG00000000935	unk	94	60.153	ENSNGAG00000012366	Unk	96	58.876	Nannospalax_galili
ENSDARG00000000935	unk	94	57.417	ENSNLEG00000001120	UNK	97	56.138	Nomascus_leucogenys
ENSDARG00000000935	unk	94	57.143	ENSMEUG00000004094	UNK	96	57.270	Notamacropus_eugenii
ENSDARG00000000935	unk	94	58.846	ENSOPRG00000012784	UNK	96	57.545	Ochotona_princeps
ENSDARG00000000935	unk	94	56.051	ENSODEG00000010183	UNK	96	54.729	Octodon_degus
ENSDARG00000000935	unk	94	59.821	ENSOCUG00000014994	UNK	96	58.546	Oryctolagus_cuniculus
ENSDARG00000000935	unk	95	72.917	ENSORLG00000028573	unk	96	72.692	Oryzias_latipes
ENSDARG00000000935	unk	94	73.289	ENSOMEG00000009977	unk	96	73.056	Oryzias_melastigma
ENSDARG00000000935	unk	94	59.004	ENSOGAG00000001922	UNK	88	57.727	Otolemur_garnettii
ENSDARG00000000935	unk	94	50.877	ENSOARG00000009548	UNK	96	50.752	Ovis_aries
ENSDARG00000000935	unk	94	59.770	ENSPPAG00000032800	UNK	96	58.493	Pan_paniscus
ENSDARG00000000935	unk	94	60.026	ENSPPRG00000008948	UNK	96	58.748	Panthera_pardus
ENSDARG00000000935	unk	94	59.898	ENSPTIG00000005435	UNK	96	58.621	Panthera_tigris_altaica
ENSDARG00000000935	unk	94	59.770	ENSPTRG00000009656	UNK	96	58.493	Pan_troglodytes
ENSDARG00000000935	unk	94	59.770	ENSPANG00000020121	UNK	96	58.748	Papio_anubis
ENSDARG00000000935	unk	95	76.364	ENSPKIG00000022222	unk	96	76.357	Paramormyrops_kingsleyae
ENSDARG00000000935	unk	75	36.444	ENSPSIG00000009640	UNK	98	47.926	Pelodiscus_sinensis
ENSDARG00000000935	unk	99	73.496	ENSPMGG00000021574	unk	94	74.267	Periophthalmus_magnuspinnatus
ENSDARG00000000935	unk	94	59.642	ENSPEMG00000016145	Unk	96	58.493	Peromyscus_maniculatus_bairdii
ENSDARG00000000935	unk	94	60.332	ENSPCIG00000020300	UNK	84	59.288	Phascolarctos_cinereus
ENSDARG00000000935	unk	94	59.770	ENSPPYG00000008637	UNK	96	58.493	Pongo_abelii
ENSDARG00000000935	unk	81	58.384	ENSPCAG00000004504	UNK	84	56.566	Procavia_capensis
ENSDARG00000000935	unk	94	59.132	ENSPCOG00000027411	UNK	96	57.982	Propithecus_coquereli
ENSDARG00000000935	unk	89	77.846	ENSPVAG00000008460	UNK	85	77.846	Pteropus_vampyrus
ENSDARG00000000935	unk	94	83.536	ENSPNAG00000011973	unk	100	82.166	Pygocentrus_nattereri
ENSDARG00000000935	unk	94	59.515	ENSRNOG00000006600	Unk	96	58.493	Rattus_norvegicus
ENSDARG00000000935	unk	94	59.770	ENSRBIG00000025523	UNK	96	58.493	Rhinopithecus_bieti
ENSDARG00000000935	unk	94	59.770	ENSRROG00000013651	UNK	96	58.493	Rhinopithecus_roxellana
ENSDARG00000000935	unk	94	58.503	ENSSBOG00000019483	UNK	96	57.234	Saimiri_boliviensis_boliviensis
ENSDARG00000000935	unk	94	59.466	ENSSHAG00000017696	UNK	96	58.958	Sarcophilus_harrisii
ENSDARG00000000935	unk	95	67.876	ENSSFOG00015003052	unk	89	77.827	Scleropages_formosus
ENSDARG00000000935	unk	99	74.872	ENSSDUG00000012373	unk	95	75.267	Seriola_dumerili
ENSDARG00000000935	unk	94	74.800	ENSSLDG00000001990	unk	95	74.800	Seriola_lalandi_dorsalis
ENSDARG00000000935	unk	92	58.213	ENSSPUG00000008526	UNK	96	57.293	Sphenodon_punctatus
ENSDARG00000000935	unk	94	60.153	ENSSSCG00000017201	UNK	96	58.876	Sus_scrofa
ENSDARG00000000935	unk	94	58.302	ENSTGUG00000008279	UNK	98	57.519	Taeniopygia_guttata
ENSDARG00000000935	unk	86	80.392	ENSTTRG00000015890	UNK	83	80.392	Tursiops_truncatus
ENSDARG00000000935	unk	92	55.599	ENSUAMG00000003483	UNK	96	54.427	Ursus_americanus
ENSDARG00000000935	unk	92	59.505	ENSUMAG00000010576	UNK	99	58.203	Ursus_maritimus
ENSDARG00000000935	unk	50	58.313	ENSVPAG00000011532	-	56	56.188	Vicugna_pacos
ENSDARG00000000935	unk	94	61.853	ENSVVUG00000014786	UNK	99	58.654	Vulpes_vulpes
ENSDARG00000000935	unk	94	57.272	ENSXETG00000012578	unk	95	56.347	Xenopus_tropicalis

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0001764	neuron migration	21873635.	IBA	Process
GO:0005575	cellular_component	-	ND	Component
GO:0005844	polysome	21873635.	IBA	Component
GO:0046872	metal ion binding	-	IEA	Function
GO:0048667	cell morphogenesis involved in neuron differentiation	21873635.	IBA	Process
GO:1990715	mRNA CDS binding	21873635.	IBA	Function
GO:2000766	negative regulation of cytoplasmic translation	21873635.	IBA	Process