EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000001057 (Gene tree)
Gene ID: 394081
Gene Symbol: bysl
Alias: zgc:63889
Full Name: bystin-like
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Minus strand
Length: 7138 bases
Position: chr22:550828-557965
Accession: ZDB-GENE-040426-1287
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000001346	Bystin	PF05291.11	6.3e-138	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000001201	-	1504	-	ENSDARP00000001346	466 (aa)	-	F1R7L3

Gene Model

Click here to download ENSDARG00000001057's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000001057's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000001057	bysl	89	74.014	ENSG00000112578	BYSL	91	86.228	Homo_sapiens
ENSDARG00000001057	bysl	89	78.372	ENSAPOG00000017917	bysl	99	78.372	Acanthochromis_polyacanthus
ENSDARG00000001057	bysl	90	72.998	ENSAMEG00000013033	BYSL	99	73.227	Ailuropoda_melanoleuca
ENSDARG00000001057	bysl	65	88.372	ENSACIG00000019537	bysl	98	88.372	Amphilophus_citrinellus
ENSDARG00000001057	bysl	87	79.469	ENSAOCG00000001625	bysl	99	78.605	Amphiprion_ocellaris
ENSDARG00000001057	bysl	87	79.469	ENSAPEG00000014739	bysl	99	78.605	Amphiprion_percula
ENSDARG00000001057	bysl	89	78.605	ENSATEG00000006316	bysl	99	78.605	Anabas_testudineus
ENSDARG00000001057	bysl	69	80.061	ENSAPLG00000008733	BYSL	98	80.061	Anas_platyrhynchos
ENSDARG00000001057	bysl	90	71.106	ENSACAG00000003079	BYSL	92	72.009	Anolis_carolinensis
ENSDARG00000001057	bysl	89	74.827	ENSANAG00000036138	BYSL	99	75.058	Aotus_nancymaae
ENSDARG00000001057	bysl	89	78.555	ENSACLG00000022434	bysl	99	78.555	Astatotilapia_calliptera
ENSDARG00000001057	bysl	91	78.211	ENSAMXG00000008799	bysl	100	78.211	Astyanax_mexicanus
ENSDARG00000001057	bysl	90	74.194	ENSBTAG00000010101	BYSL	99	74.194	Bos_taurus
ENSDARG00000001057	bysl	84	51.100	WBGene00000276	byn-1	89	52.709	Caenorhabditis_elegans
ENSDARG00000001057	bysl	89	74.365	ENSCJAG00000004266	BYSL	99	74.424	Callithrix_jacchus
ENSDARG00000001057	bysl	90	72.477	ENSCAFG00000001614	BYSL	99	72.477	Canis_familiaris
ENSDARG00000001057	bysl	90	72.477	ENSCAFG00020008426	BYSL	99	72.477	Canis_lupus_dingo
ENSDARG00000001057	bysl	90	74.424	ENSCHIG00000017590	BYSL	72	74.424	Capra_hircus
ENSDARG00000001057	bysl	90	73.853	ENSTSYG00000029904	BYSL	99	73.853	Carlito_syrichta
ENSDARG00000001057	bysl	63	84.642	ENSCAPG00000015987	BYSL	99	84.642	Cavia_aperea
ENSDARG00000001057	bysl	90	74.713	ENSCPOG00000004403	BYSL	99	74.713	Cavia_porcellus
ENSDARG00000001057	bysl	90	74.312	ENSCCAG00000036583	BYSL	99	74.541	Cebus_capucinus
ENSDARG00000001057	bysl	90	73.624	ENSCATG00000039266	BYSL	99	73.624	Cercocebus_atys
ENSDARG00000001057	bysl	90	74.943	ENSCLAG00000014143	BYSL	99	74.943	Chinchilla_lanigera
ENSDARG00000001057	bysl	90	73.624	ENSCSAG00000011306	BYSL	99	73.624	Chlorocebus_sabaeus
ENSDARG00000001057	bysl	64	85.845	ENSCHOG00000011476	BYSL	69	85.845	Choloepus_hoffmanni
ENSDARG00000001057	bysl	89	71.946	ENSCPBG00000017439	BYSL	99	71.946	Chrysemys_picta_bellii
ENSDARG00000001057	bysl	87	57.767	ENSCING00000001646	-	94	57.767	Ciona_intestinalis
ENSDARG00000001057	bysl	86	56.448	ENSCSAVG00000008659	-	94	56.448	Ciona_savignyi
ENSDARG00000001057	bysl	90	73.394	ENSCANG00000031335	BYSL	99	73.394	Colobus_angolensis_palliatus
ENSDARG00000001057	bysl	62	73.010	ENSCGRG00001007527	-	97	71.572	Cricetulus_griseus_chok1gshd
ENSDARG00000001057	bysl	90	70.327	ENSCGRG00001006626	-	99	70.327	Cricetulus_griseus_chok1gshd
ENSDARG00000001057	bysl	52	72.727	ENSCGRG00001022668	-	86	72.727	Cricetulus_griseus_chok1gshd
ENSDARG00000001057	bysl	60	79.930	ENSCGRG00001008990	-	91	79.930	Cricetulus_griseus_chok1gshd
ENSDARG00000001057	bysl	87	65.860	ENSCGRG00001010109	-	98	65.526	Cricetulus_griseus_chok1gshd
ENSDARG00000001057	bysl	90	69.161	ENSCGRG00000000072	-	99	69.388	Cricetulus_griseus_crigri
ENSDARG00000001057	bysl	63	69.697	ENSCGRG00000016274	-	99	69.697	Cricetulus_griseus_crigri
ENSDARG00000001057	bysl	87	70.813	ENSCGRG00000016761	-	98	70.813	Cricetulus_griseus_crigri
ENSDARG00000001057	bysl	89	69.142	ENSCGRG00000013448	-	98	69.142	Cricetulus_griseus_crigri
ENSDARG00000001057	bysl	63	62.925	ENSCGRG00000002253	-	99	62.925	Cricetulus_griseus_crigri
ENSDARG00000001057	bysl	95	73.922	ENSCSEG00000002246	bysl	94	78.788	Cynoglossus_semilaevis
ENSDARG00000001057	bysl	88	79.665	ENSCVAG00000023275	bysl	99	78.391	Cyprinodon_variegatus
ENSDARG00000001057	bysl	90	72.831	ENSDNOG00000016670	BYSL	99	72.831	Dasypus_novemcinctus
ENSDARG00000001057	bysl	90	73.793	ENSDORG00000010968	Bysl	99	73.793	Dipodomys_ordii
ENSDARG00000001057	bysl	88	51.074	FBgn0010292	bys	94	51.074	Drosophila_melanogaster
ENSDARG00000001057	bysl	77	72.945	ENSETEG00000018226	BYSL	83	72.945	Echinops_telfairi
ENSDARG00000001057	bysl	90	65.747	ENSEBUG00000000925	bysl	97	65.747	Eptatretus_burgeri
ENSDARG00000001057	bysl	90	73.853	ENSEASG00005003059	BYSL	99	74.083	Equus_asinus_asinus
ENSDARG00000001057	bysl	90	73.853	ENSECAG00000021260	BYSL	99	74.083	Equus_caballus
ENSDARG00000001057	bysl	87	79.710	ENSELUG00000014214	bysl	96	78.291	Esox_lucius
ENSDARG00000001057	bysl	90	73.563	ENSFCAG00000026154	BYSL	99	73.563	Felis_catus
ENSDARG00000001057	bysl	62	84.536	ENSFALG00000002897	BYSL	95	84.536	Ficedula_albicollis
ENSDARG00000001057	bysl	89	72.170	ENSFDAG00000014804	BYSL	98	72.170	Fukomys_damarensis
ENSDARG00000001057	bysl	88	80.288	ENSFHEG00000005147	bysl	99	77.904	Fundulus_heteroclitus
ENSDARG00000001057	bysl	91	76.037	ENSGMOG00000008061	bysl	100	76.037	Gadus_morhua
ENSDARG00000001057	bysl	90	70.670	ENSGALG00000003467	BYSL	99	70.670	Gallus_gallus
ENSDARG00000001057	bysl	85	78.133	ENSGAFG00000021598	bysl	98	76.157	Gambusia_affinis
ENSDARG00000001057	bysl	89	78.009	ENSGACG00000001059	bysl	99	78.009	Gasterosteus_aculeatus
ENSDARG00000001057	bysl	89	72.398	ENSGAGG00000017774	BYSL	99	72.398	Gopherus_agassizii
ENSDARG00000001057	bysl	89	74.246	ENSGGOG00000027046	BYSL	99	74.246	Gorilla_gorilla
ENSDARG00000001057	bysl	89	78.555	ENSHBUG00000002896	bysl	99	78.555	Haplochromis_burtoni
ENSDARG00000001057	bysl	90	74.713	ENSHGLG00000017479	BYSL	99	74.713	Heterocephalus_glaber_female
ENSDARG00000001057	bysl	90	74.713	ENSHGLG00100011829	BYSL	99	74.713	Heterocephalus_glaber_male
ENSDARG00000001057	bysl	90	75.406	ENSHCOG00000005390	bysl	99	75.406	Hippocampus_comes
ENSDARG00000001057	bysl	91	76.712	ENSIPUG00000017509	BYSL	100	77.169	Ictalurus_punctatus
ENSDARG00000001057	bysl	90	74.253	ENSSTOG00000021848	BYSL	99	74.253	Ictidomys_tridecemlineatus
ENSDARG00000001057	bysl	65	68.874	ENSJJAG00000003859	-	99	68.874	Jaculus_jaculus
ENSDARG00000001057	bysl	90	74.483	ENSJJAG00000023129	-	99	74.483	Jaculus_jaculus
ENSDARG00000001057	bysl	89	78.291	ENSKMAG00000021439	bysl	99	78.522	Kryptolebias_marmoratus
ENSDARG00000001057	bysl	91	76.802	ENSLOCG00000012661	bysl	99	77.027	Lepisosteus_oculatus
ENSDARG00000001057	bysl	80	77.083	ENSLAFG00000015418	BYSL	99	77.394	Loxodonta_africana
ENSDARG00000001057	bysl	90	73.624	ENSMFAG00000033214	BYSL	99	73.624	Macaca_fascicularis
ENSDARG00000001057	bysl	90	73.624	ENSMMUG00000004416	BYSL	99	73.624	Macaca_mulatta
ENSDARG00000001057	bysl	90	73.624	ENSMNEG00000043045	BYSL	99	73.624	Macaca_nemestrina
ENSDARG00000001057	bysl	90	73.624	ENSMLEG00000041724	BYSL	99	73.624	Mandrillus_leucophaeus
ENSDARG00000001057	bysl	90	78.009	ENSMAMG00000023910	bysl	99	78.241	Mastacembelus_armatus
ENSDARG00000001057	bysl	89	78.788	ENSMZEG00005011046	bysl	99	78.788	Maylandia_zebra
ENSDARG00000001057	bysl	55	85.603	ENSMGAG00000006299	BYSL	98	85.603	Meleagris_gallopavo
ENSDARG00000001057	bysl	58	83.010	ENSMAUG00000010845	Bysl	95	83.010	Mesocricetus_auratus
ENSDARG00000001057	bysl	90	74.886	ENSMICG00000011347	BYSL	99	75.114	Microcebus_murinus
ENSDARG00000001057	bysl	90	74.483	ENSMOCG00000002210	Bysl	99	74.483	Microtus_ochrogaster
ENSDARG00000001057	bysl	65	89.369	ENSMMOG00000021768	bysl	98	89.369	Mola_mola
ENSDARG00000001057	bysl	91	71.591	ENSMODG00000012808	BYSL	100	71.591	Monodelphis_domestica
ENSDARG00000001057	bysl	89	78.060	ENSMALG00000018147	bysl	99	78.060	Monopterus_albus
ENSDARG00000001057	bysl	87	74.163	MGP_CAROLIEiJ_G0021703	Bysl	96	74.163	Mus_caroli
ENSDARG00000001057	bysl	90	73.333	ENSMUSG00000023988	Bysl	99	73.333	Mus_musculus
ENSDARG00000001057	bysl	90	73.563	MGP_PahariEiJ_G0020693	Bysl	99	73.563	Mus_pahari
ENSDARG00000001057	bysl	90	73.103	MGP_SPRETEiJ_G0022615	Bysl	99	73.103	Mus_spretus
ENSDARG00000001057	bysl	89	73.611	ENSMPUG00000013486	BYSL	99	73.611	Mustela_putorius_furo
ENSDARG00000001057	bysl	90	74.541	ENSMLUG00000014028	BYSL	99	74.541	Myotis_lucifugus
ENSDARG00000001057	bysl	62	84.192	ENSNGAG00000005496	Bysl	99	84.192	Nannospalax_galili
ENSDARG00000001057	bysl	89	78.322	ENSNBRG00000006639	bysl	99	78.322	Neolamprologus_brichardi
ENSDARG00000001057	bysl	90	65.826	ENSNLEG00000032809	BYSL	99	65.826	Nomascus_leucogenys
ENSDARG00000001057	bysl	63	82.192	ENSMEUG00000000759	BYSL	99	82.192	Notamacropus_eugenii
ENSDARG00000001057	bysl	90	75.000	ENSOPRG00000015845	BYSL	99	75.000	Ochotona_princeps
ENSDARG00000001057	bysl	90	74.253	ENSODEG00000016059	BYSL	99	74.253	Octodon_degus
ENSDARG00000001057	bysl	90	77.546	ENSONIG00000018932	bysl	99	77.546	Oreochromis_niloticus
ENSDARG00000001057	bysl	90	75.229	ENSOCUG00000017567	BYSL	99	75.459	Oryctolagus_cuniculus
ENSDARG00000001057	bysl	89	78.190	ENSORLG00000000248	bysl	99	78.190	Oryzias_latipes
ENSDARG00000001057	bysl	89	77.958	ENSORLG00020008275	bysl	99	77.958	Oryzias_latipes_hni
ENSDARG00000001057	bysl	89	78.190	ENSORLG00015004475	bysl	99	78.190	Oryzias_latipes_hsok
ENSDARG00000001057	bysl	87	78.502	ENSOMEG00000015003	bysl	99	76.905	Oryzias_melastigma
ENSDARG00000001057	bysl	90	73.624	ENSOGAG00000015234	BYSL	99	73.624	Otolemur_garnettii
ENSDARG00000001057	bysl	77	76.408	ENSOARG00000002863	BYSL	99	76.408	Ovis_aries
ENSDARG00000001057	bysl	90	73.394	ENSPPAG00000028063	BYSL	99	73.394	Pan_paniscus
ENSDARG00000001057	bysl	90	73.563	ENSPPRG00000010500	BYSL	99	73.563	Panthera_pardus
ENSDARG00000001057	bysl	90	73.563	ENSPTIG00000010244	BYSL	99	73.563	Panthera_tigris_altaica
ENSDARG00000001057	bysl	90	73.394	ENSPTRG00000018163	BYSL	99	73.394	Pan_troglodytes
ENSDARG00000001057	bysl	90	73.624	ENSPANG00000007619	BYSL	99	73.624	Papio_anubis
ENSDARG00000001057	bysl	88	77.327	ENSPKIG00000001265	bysl	100	76.082	Paramormyrops_kingsleyae
ENSDARG00000001057	bysl	89	72.336	ENSPSIG00000009405	BYSL	99	72.789	Pelodiscus_sinensis
ENSDARG00000001057	bysl	90	76.815	ENSPMGG00000004006	bysl	99	76.815	Periophthalmus_magnuspinnatus
ENSDARG00000001057	bysl	90	74.713	ENSPEMG00000022283	Bysl	98	84.175	Peromyscus_maniculatus_bairdii
ENSDARG00000001057	bysl	66	79.545	ENSPMAG00000000953	bysl	97	74.481	Petromyzon_marinus
ENSDARG00000001057	bysl	91	70.455	ENSPCIG00000025889	BYSL	100	70.682	Phascolarctos_cinereus
ENSDARG00000001057	bysl	90	76.147	ENSPFOG00000000406	bysl	99	76.147	Poecilia_formosa
ENSDARG00000001057	bysl	90	75.688	ENSPLAG00000013506	bysl	99	76.147	Poecilia_latipinna
ENSDARG00000001057	bysl	90	76.376	ENSPMEG00000004461	bysl	99	76.376	Poecilia_mexicana
ENSDARG00000001057	bysl	90	75.799	ENSPREG00000004437	bysl	99	76.484	Poecilia_reticulata
ENSDARG00000001057	bysl	71	77.391	ENSPCAG00000004575	BYSL	80	77.391	Procavia_capensis
ENSDARG00000001057	bysl	86	63.570	ENSPCOG00000003664	-	94	63.570	Propithecus_coquereli
ENSDARG00000001057	bysl	90	74.658	ENSPCOG00000020727	-	99	74.886	Propithecus_coquereli
ENSDARG00000001057	bysl	90	73.624	ENSPVAG00000007606	BYSL	99	73.853	Pteropus_vampyrus
ENSDARG00000001057	bysl	89	78.555	ENSPNYG00000007839	bysl	99	78.555	Pundamilia_nyererei
ENSDARG00000001057	bysl	91	78.089	ENSPNAG00000010533	bysl	100	78.089	Pygocentrus_nattereri
ENSDARG00000001057	bysl	90	73.455	ENSRNOG00000049121	Bysl	99	73.455	Rattus_norvegicus
ENSDARG00000001057	bysl	90	73.394	ENSRBIG00000030183	BYSL	99	73.394	Rhinopithecus_bieti
ENSDARG00000001057	bysl	90	73.624	ENSRROG00000007843	-	99	73.624	Rhinopithecus_roxellana
ENSDARG00000001057	bysl	88	74.065	ENSRROG00000030276	-	98	74.065	Rhinopithecus_roxellana
ENSDARG00000001057	bysl	80	37.793	YBR247C	ENP1	88	38.372	Saccharomyces_cerevisiae
ENSDARG00000001057	bysl	90	74.260	ENSSBOG00000034517	BYSL	99	74.487	Saimiri_boliviensis_boliviensis
ENSDARG00000001057	bysl	91	70.588	ENSSHAG00000003954	BYSL	100	70.814	Sarcophilus_harrisii
ENSDARG00000001057	bysl	91	75.057	ENSSFOG00015016401	bysl	100	75.057	Scleropages_formosus
ENSDARG00000001057	bysl	87	78.744	ENSSMAG00000000371	bysl	99	76.959	Scophthalmus_maximus
ENSDARG00000001057	bysl	87	79.952	ENSSDUG00000009127	bysl	99	79.070	Seriola_dumerili
ENSDARG00000001057	bysl	87	79.952	ENSSLDG00000022707	bysl	99	79.070	Seriola_lalandi_dorsalis
ENSDARG00000001057	bysl	90	67.352	ENSSPUG00000007702	BYSL	99	67.352	Sphenodon_punctatus
ENSDARG00000001057	bysl	90	78.391	ENSSPAG00000013378	bysl	99	78.621	Stegastes_partitus
ENSDARG00000001057	bysl	90	71.198	ENSSSCG00000026752	BYSL	99	71.429	Sus_scrofa
ENSDARG00000001057	bysl	90	77.907	ENSTRUG00000008963	bysl	98	85.714	Takifugu_rubripes
ENSDARG00000001057	bysl	89	78.118	ENSTNIG00000014648	bysl	98	78.353	Tetraodon_nigroviridis
ENSDARG00000001057	bysl	63	83.219	ENSTBEG00000009332	-	67	83.219	Tupaia_belangeri
ENSDARG00000001057	bysl	90	66.590	ENSTTRG00000009429	BYSL	99	67.366	Tursiops_truncatus
ENSDARG00000001057	bysl	90	72.998	ENSUAMG00000027838	BYSL	99	73.227	Ursus_americanus
ENSDARG00000001057	bysl	90	66.213	ENSUMAG00000011988	BYSL	99	66.440	Ursus_maritimus
ENSDARG00000001057	bysl	65	71.875	ENSVPAG00000005678	BYSL	74	72.188	Vicugna_pacos
ENSDARG00000001057	bysl	90	72.706	ENSVVUG00000026680	BYSL	99	72.706	Vulpes_vulpes
ENSDARG00000001057	bysl	89	70.960	ENSXETG00000011846	bysl	99	70.960	Xenopus_tropicalis
ENSDARG00000001057	bysl	85	73.956	ENSXCOG00000003684	bysl	98	71.889	Xiphophorus_couchianus
ENSDARG00000001057	bysl	85	79.012	ENSXMAG00000001060	bysl	98	76.443	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0005634	nucleus	21873635.	IBA	Component
GO:0005730	nucleolus	21873635.	IBA	Component
GO:0005737	cytoplasm	21873635.	IBA	Component
GO:0006364	rRNA processing	21873635.	IBA	Process
GO:0030515	snoRNA binding	21873635.	IBA	Function
GO:0030688	preribosome, small subunit precursor	21873635.	IBA	Component