EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000001129 (Gene tree)
Gene ID: 324724
Gene Symbol: dicer1
Alias: fc39d11|fc74b05|wu:fc39d11|wu:fc74b05
Full Name: dicer 1%2C ribonuclease type III
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Minus strand
Length: 46331 bases
Position: chr17:19419989-19466319
Accession: ZDB-GENE-030131-3445
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000045880	Ribonuclease_3	PF00636.26	1.5e-70	1	2
ENSDARP00000045880	Ribonuclease_3	PF00636.26	1.5e-70	2	2
ENSDARP00000133052	Ribonuclease_3	PF00636.26	1.6e-70	1	2
ENSDARP00000133052	Ribonuclease_3	PF00636.26	1.6e-70	2	2
ENSDARP00000045880	PAZ	PF02170.22	2.1e-39	1	1
ENSDARP00000133052	PAZ	PF02170.22	2.4e-35	1	1
ENSDARP00000045880	Ribonucleas_3_3	PF14622.6	1.6e-24	1	1
ENSDARP00000133052	Ribonucleas_3_3	PF14622.6	1.7e-24	1	1
ENSDARP00000045880	ResIII	PF04851.15	2.5e-11	1	1
ENSDARP00000133052	ResIII	PF04851.15	2.7e-11	1	1
ENSDARP00000045880	DEAD	PF00270.29	2e-11	1	1
ENSDARP00000133052	DEAD	PF00270.29	2e-11	1	1
ENSDARP00000045880	Dicer_dimer	PF03368.14	3.5e-24	1	1
ENSDARP00000133052	Dicer_dimer	PF03368.14	3.6e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000170429	-	6123	-	ENSDARP00000133052	1905 (aa)	-	A0A0R4IDJ0
ENSDART00000045881	-	9598	XM_005158665	ENSDARP00000045880	1865 (aa)	XP_005158722	Q6TV19

Gene Model

Click here to download ENSDARG00000001129's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000001129's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000001129	dicer1	100	79.128	ENSG00000100697	DICER1	86	96.667	Homo_sapiens
ENSDARG00000001129	dicer1	100	81.993	ENSAPOG00000020381	dicer1	100	81.931	Acanthochromis_polyacanthus
ENSDARG00000001129	dicer1	100	79.037	ENSAMEG00000006447	DICER1	99	79.070	Ailuropoda_melanoleuca
ENSDARG00000001129	dicer1	95	81.169	ENSACIG00000000890	dicer1	99	81.169	Amphilophus_citrinellus
ENSDARG00000001129	dicer1	100	82.215	ENSAOCG00000023381	dicer1	100	82.102	Amphiprion_ocellaris
ENSDARG00000001129	dicer1	100	81.668	ENSAPEG00000022809	dicer1	100	81.903	Amphiprion_percula
ENSDARG00000001129	dicer1	100	82.234	ENSATEG00000014048	dicer1	100	82.525	Anabas_testudineus
ENSDARG00000001129	dicer1	100	79.180	ENSAPLG00000012407	DICER1	99	79.180	Anas_platyrhynchos
ENSDARG00000001129	dicer1	100	79.282	ENSACAG00000013033	DICER1	99	79.334	Anolis_carolinensis
ENSDARG00000001129	dicer1	100	79.076	ENSANAG00000023622	DICER1	99	79.076	Aotus_nancymaae
ENSDARG00000001129	dicer1	100	81.696	ENSACLG00000007920	dicer1	100	81.931	Astatotilapia_calliptera
ENSDARG00000001129	dicer1	100	86.727	ENSAMXG00000010730	dicer1	100	86.667	Astyanax_mexicanus
ENSDARG00000001129	dicer1	100	79.106	ENSBTAG00000012852	DICER1	99	79.054	Bos_taurus
ENSDARG00000001129	dicer1	81	54.701	WBGene00000939	dcr-1	78	54.701	Caenorhabditis_elegans
ENSDARG00000001129	dicer1	100	79.024	ENSCJAG00000006225	DICER1	99	79.024	Callithrix_jacchus
ENSDARG00000001129	dicer1	100	79.111	ENSCAFG00000017701	DICER1	99	79.162	Canis_familiaris
ENSDARG00000001129	dicer1	100	79.111	ENSCAFG00020014247	DICER1	99	79.162	Canis_lupus_dingo
ENSDARG00000001129	dicer1	100	78.827	ENSCHIG00000015885	DICER1	99	78.827	Capra_hircus
ENSDARG00000001129	dicer1	95	78.731	ENSTSYG00000002044	DICER1	98	78.731	Carlito_syrichta
ENSDARG00000001129	dicer1	97	74.072	ENSCAPG00000000101	DICER1	98	74.180	Cavia_aperea
ENSDARG00000001129	dicer1	100	78.102	ENSCPOG00000004221	DICER1	99	78.259	Cavia_porcellus
ENSDARG00000001129	dicer1	100	79.024	ENSCCAG00000027063	DICER1	99	79.024	Cebus_capucinus
ENSDARG00000001129	dicer1	100	79.024	ENSCATG00000031403	DICER1	99	79.024	Cercocebus_atys
ENSDARG00000001129	dicer1	100	78.832	ENSCLAG00000015000	DICER1	99	78.854	Chinchilla_lanigera
ENSDARG00000001129	dicer1	100	79.128	ENSCSAG00000010696	DICER1	99	79.128	Chlorocebus_sabaeus
ENSDARG00000001129	dicer1	79	76.065	ENSCHOG00000002136	DICER1	89	76.065	Choloepus_hoffmanni
ENSDARG00000001129	dicer1	95	84.757	ENSCPBG00000009859	DICER1	99	84.757	Chrysemys_picta_bellii
ENSDARG00000001129	dicer1	98	44.427	ENSCING00000008383	-	99	44.733	Ciona_intestinalis
ENSDARG00000001129	dicer1	54	79.592	ENSCSAVG00000006137	-	99	48.259	Ciona_savignyi
ENSDARG00000001129	dicer1	100	79.128	ENSCANG00000031429	DICER1	99	79.180	Colobus_angolensis_palliatus
ENSDARG00000001129	dicer1	100	78.299	ENSCGRG00001008088	Dicer1	99	78.008	Cricetulus_griseus_chok1gshd
ENSDARG00000001129	dicer1	100	78.299	ENSCGRG00000012281	Dicer1	99	78.008	Cricetulus_griseus_crigri
ENSDARG00000001129	dicer1	100	80.286	ENSCSEG00000017078	dicer1	100	80.127	Cynoglossus_semilaevis
ENSDARG00000001129	dicer1	100	80.828	ENSCVAG00000020035	dicer1	100	80.701	Cyprinodon_variegatus
ENSDARG00000001129	dicer1	100	76.316	ENSDNOG00000004190	DICER1	99	76.471	Dasypus_novemcinctus
ENSDARG00000001129	dicer1	99	78.672	ENSDORG00000006215	Dicer1	99	78.620	Dipodomys_ordii
ENSDARG00000001129	dicer1	80	56.620	FBgn0039016	Dcr-1	67	63.918	Drosophila_melanogaster
ENSDARG00000001129	dicer1	92	95.133	ENSETEG00000011000	DICER1	99	96.413	Echinops_telfairi
ENSDARG00000001129	dicer1	95	63.118	ENSEBUG00000013802	dicer1	98	59.510	Eptatretus_burgeri
ENSDARG00000001129	dicer1	100	78.898	ENSEASG00005021485	DICER1	99	78.961	Equus_asinus_asinus
ENSDARG00000001129	dicer1	96	83.590	ENSECAG00000006079	DICER1	99	83.590	Equus_caballus
ENSDARG00000001129	dicer1	55	96.269	ENSEEUG00000003893	-	55	96.269	Erinaceus_europaeus
ENSDARG00000001129	dicer1	100	80.405	ENSELUG00000024317	dicer1	100	80.405	Esox_lucius
ENSDARG00000001129	dicer1	100	78.931	ENSFCAG00000003535	DICER1	99	79.098	Felis_catus
ENSDARG00000001129	dicer1	100	79.344	ENSFALG00000002516	DICER1	99	79.188	Ficedula_albicollis
ENSDARG00000001129	dicer1	100	78.728	ENSFDAG00000021287	DICER1	99	78.884	Fukomys_damarensis
ENSDARG00000001129	dicer1	100	77.070	ENSFHEG00000016839	dicer1	100	77.253	Fundulus_heteroclitus
ENSDARG00000001129	dicer1	86	90.885	ENSGMOG00000006057	dicer1	89	86.859	Gadus_morhua
ENSDARG00000001129	dicer1	92	95.819	ENSGALG00000010999	DICER1	99	95.819	Gallus_gallus
ENSDARG00000001129	dicer1	100	80.967	ENSGAFG00000010728	dicer1	100	80.852	Gambusia_affinis
ENSDARG00000001129	dicer1	100	79.731	ENSGACG00000020134	dicer1	100	79.825	Gasterosteus_aculeatus
ENSDARG00000001129	dicer1	64	76.428	ENSGAGG00000016379	DICER1	99	77.162	Gopherus_agassizii
ENSDARG00000001129	dicer1	100	79.128	ENSGGOG00000003760	DICER1	99	79.128	Gorilla_gorilla
ENSDARG00000001129	dicer1	100	82.045	ENSHBUG00000018941	dicer1	100	81.931	Haplochromis_burtoni
ENSDARG00000001129	dicer1	100	78.676	ENSHGLG00000018124	DICER1	99	78.676	Heterocephalus_glaber_female
ENSDARG00000001129	dicer1	100	78.676	ENSHGLG00100010985	DICER1	99	78.676	Heterocephalus_glaber_male
ENSDARG00000001129	dicer1	100	80.137	ENSHCOG00000015738	dicer1	100	80.021	Hippocampus_comes
ENSDARG00000001129	dicer1	100	83.096	ENSIPUG00000005080	dicer1	100	83.140	Ictalurus_punctatus
ENSDARG00000001129	dicer1	100	79.301	ENSSTOG00000022439	DICER1	100	79.353	Ictidomys_tridecemlineatus
ENSDARG00000001129	dicer1	100	78.564	ENSJJAG00000010766	Dicer1	99	78.564	Jaculus_jaculus
ENSDARG00000001129	dicer1	94	97.309	ENSKMAG00000001429	dicer1	100	97.309	Kryptolebias_marmoratus
ENSDARG00000001129	dicer1	100	81.078	ENSLBEG00000008928	dicer1	100	81.286	Labrus_bergylta
ENSDARG00000001129	dicer1	100	79.111	ENSLACG00000008302	DICER1	99	79.512	Latimeria_chalumnae
ENSDARG00000001129	dicer1	100	83.699	ENSLOCG00000008544	dicer1	99	83.481	Lepisosteus_oculatus
ENSDARG00000001129	dicer1	100	79.531	ENSLAFG00000013632	DICER1	100	79.531	Loxodonta_africana
ENSDARG00000001129	dicer1	100	79.076	ENSMFAG00000002987	DICER1	99	79.076	Macaca_fascicularis
ENSDARG00000001129	dicer1	100	79.076	ENSMMUG00000023305	DICER1	99	79.076	Macaca_mulatta
ENSDARG00000001129	dicer1	100	79.076	ENSMNEG00000021073	DICER1	99	79.076	Macaca_nemestrina
ENSDARG00000001129	dicer1	100	79.024	ENSMLEG00000034800	DICER1	99	79.024	Mandrillus_leucophaeus
ENSDARG00000001129	dicer1	100	81.865	ENSMAMG00000016806	dicer1	100	81.926	Mastacembelus_armatus
ENSDARG00000001129	dicer1	100	81.696	ENSMZEG00005016989	dicer1	100	81.931	Maylandia_zebra
ENSDARG00000001129	dicer1	100	79.188	ENSMGAG00000013207	DICER1	99	79.136	Meleagris_gallopavo
ENSDARG00000001129	dicer1	100	77.956	ENSMAUG00000009936	Dicer1	99	78.008	Mesocricetus_auratus
ENSDARG00000001129	dicer1	100	78.660	ENSMICG00000011690	DICER1	99	78.712	Microcebus_murinus
ENSDARG00000001129	dicer1	100	78.218	ENSMOCG00000018636	Dicer1	99	78.270	Microtus_ochrogaster
ENSDARG00000001129	dicer1	100	80.512	ENSMMOG00000018531	dicer1	100	80.408	Mola_mola
ENSDARG00000001129	dicer1	100	79.439	ENSMODG00000012624	DICER1	99	79.387	Monodelphis_domestica
ENSDARG00000001129	dicer1	100	81.823	ENSMALG00000009445	dicer1	100	81.616	Monopterus_albus
ENSDARG00000001129	dicer1	100	77.633	ENSMUSG00000041415	Dicer1	100	77.569	Mus_musculus
ENSDARG00000001129	dicer1	100	79.152	ENSMPUG00000003130	DICER1	100	79.152	Mustela_putorius_furo
ENSDARG00000001129	dicer1	99	78.642	ENSMLUG00000003991	DICER1	99	78.590	Myotis_lucifugus
ENSDARG00000001129	dicer1	100	78.381	ENSNGAG00000010103	Dicer1	99	78.277	Nannospalax_galili
ENSDARG00000001129	dicer1	98	80.319	ENSNBRG00000022306	dicer1	97	80.202	Neolamprologus_brichardi
ENSDARG00000001129	dicer1	100	79.232	ENSNLEG00000017309	DICER1	99	79.283	Nomascus_leucogenys
ENSDARG00000001129	dicer1	72	95.455	ENSMEUG00000000614	-	77	95.455	Notamacropus_eugenii
ENSDARG00000001129	dicer1	96	96.429	ENSOPRG00000014698	DICER1	95	96.429	Ochotona_princeps
ENSDARG00000001129	dicer1	100	78.761	ENSODEG00000008594	DICER1	99	78.865	Octodon_degus
ENSDARG00000001129	dicer1	100	80.744	ENSONIG00000010424	dicer1	99	81.074	Oreochromis_niloticus
ENSDARG00000001129	dicer1	100	79.543	ENSOANG00000012034	DICER1	99	79.491	Ornithorhynchus_anatinus
ENSDARG00000001129	dicer1	100	77.399	ENSOCUG00000010849	DICER1	99	77.554	Oryctolagus_cuniculus
ENSDARG00000001129	dicer1	100	80.775	ENSORLG00000011022	dicer1	98	85.565	Oryzias_latipes
ENSDARG00000001129	dicer1	100	80.880	ENSORLG00020021795	dicer1	98	85.739	Oryzias_latipes_hni
ENSDARG00000001129	dicer1	100	80.765	ENSORLG00015019667	dicer1	100	80.880	Oryzias_latipes_hsok
ENSDARG00000001129	dicer1	100	81.073	ENSOMEG00000018679	dicer1	100	81.102	Oryzias_melastigma
ENSDARG00000001129	dicer1	93	76.983	ENSOGAG00000010719	DICER1	97	77.151	Otolemur_garnettii
ENSDARG00000001129	dicer1	100	78.672	ENSOARG00000015465	DICER1	99	78.620	Ovis_aries
ENSDARG00000001129	dicer1	100	79.128	ENSPPAG00000035143	DICER1	99	79.128	Pan_paniscus
ENSDARG00000001129	dicer1	100	79.253	ENSPPRG00000001322	DICER1	99	79.253	Panthera_pardus
ENSDARG00000001129	dicer1	100	78.994	ENSPTIG00000008215	DICER1	99	79.087	Panthera_tigris_altaica
ENSDARG00000001129	dicer1	100	79.128	ENSPTRG00000023484	DICER1	99	79.128	Pan_troglodytes
ENSDARG00000001129	dicer1	100	79.128	ENSPANG00000023078	DICER1	99	79.128	Papio_anubis
ENSDARG00000001129	dicer1	100	81.947	ENSPKIG00000019962	dicer1	99	81.789	Paramormyrops_kingsleyae
ENSDARG00000001129	dicer1	100	78.015	ENSPSIG00000010801	DICER1	99	77.963	Pelodiscus_sinensis
ENSDARG00000001129	dicer1	100	81.149	ENSPMGG00000010210	dicer1	100	82.066	Periophthalmus_magnuspinnatus
ENSDARG00000001129	dicer1	100	77.975	ENSPEMG00000014125	Dicer1	99	77.975	Peromyscus_maniculatus_bairdii
ENSDARG00000001129	dicer1	100	79.594	ENSPCIG00000018004	DICER1	99	79.750	Phascolarctos_cinereus
ENSDARG00000001129	dicer1	100	80.868	ENSPFOG00000008531	dicer1	100	80.805	Poecilia_formosa
ENSDARG00000001129	dicer1	99	80.406	ENSPLAG00000008539	dicer1	99	80.691	Poecilia_latipinna
ENSDARG00000001129	dicer1	100	80.805	ENSPMEG00000014284	dicer1	100	80.795	Poecilia_mexicana
ENSDARG00000001129	dicer1	100	80.701	ENSPREG00000012120	dicer1	100	80.638	Poecilia_reticulata
ENSDARG00000001129	dicer1	100	79.024	ENSPPYG00000006112	DICER1	99	79.024	Pongo_abelii
ENSDARG00000001129	dicer1	84	82.609	ENSPCAG00000010828	DICER1	83	82.609	Procavia_capensis
ENSDARG00000001129	dicer1	100	79.145	ENSPCOG00000022909	DICER1	99	79.197	Propithecus_coquereli
ENSDARG00000001129	dicer1	98	72.034	ENSPVAG00000004811	DICER1	100	71.981	Pteropus_vampyrus
ENSDARG00000001129	dicer1	100	81.644	ENSPNYG00000017939	dicer1	100	81.880	Pundamilia_nyererei
ENSDARG00000001129	dicer1	100	88.427	ENSPNAG00000001012	dicer1	100	88.526	Pygocentrus_nattereri
ENSDARG00000001129	dicer1	100	78.027	ENSRNOG00000010711	Dicer1	99	77.923	Rattus_norvegicus
ENSDARG00000001129	dicer1	99	79.095	ENSRBIG00000020932	DICER1	99	79.147	Rhinopithecus_bieti
ENSDARG00000001129	dicer1	99	79.095	ENSRROG00000031891	DICER1	99	79.147	Rhinopithecus_roxellana
ENSDARG00000001129	dicer1	100	79.024	ENSSBOG00000028660	DICER1	99	79.024	Saimiri_boliviensis_boliviensis
ENSDARG00000001129	dicer1	100	79.355	ENSSHAG00000012077	DICER1	99	79.511	Sarcophilus_harrisii
ENSDARG00000001129	dicer1	100	83.010	ENSSFOG00015010804	dicer1	99	86.719	Scleropages_formosus
ENSDARG00000001129	dicer1	100	81.029	ENSSMAG00000015520	dicer1	100	80.863	Scophthalmus_maximus
ENSDARG00000001129	dicer1	100	82.356	ENSSDUG00000021652	dicer1	100	82.356	Seriola_dumerili
ENSDARG00000001129	dicer1	100	79.653	ENSSLDG00000012087	dicer1	100	79.495	Seriola_lalandi_dorsalis
ENSDARG00000001129	dicer1	61	84.127	ENSSARG00000000219	-	59	84.354	Sorex_araneus
ENSDARG00000001129	dicer1	100	79.104	ENSSPUG00000016222	DICER1	99	79.104	Sphenodon_punctatus
ENSDARG00000001129	dicer1	100	82.026	ENSSPAG00000017128	dicer1	99	82.007	Stegastes_partitus
ENSDARG00000001129	dicer1	100	79.010	ENSSSCG00000028225	DICER1	99	79.164	Sus_scrofa
ENSDARG00000001129	dicer1	100	79.240	ENSTGUG00000012658	DICER1	99	78.980	Taeniopygia_guttata
ENSDARG00000001129	dicer1	99	79.460	ENSTRUG00000006156	dicer1	99	79.413	Takifugu_rubripes
ENSDARG00000001129	dicer1	100	78.858	ENSTNIG00000005441	dicer1	99	78.928	Tetraodon_nigroviridis
ENSDARG00000001129	dicer1	95	73.253	ENSTBEG00000012374	DICER1	99	73.199	Tupaia_belangeri
ENSDARG00000001129	dicer1	94	83.367	ENSTTRG00000013044	DICER1	94	83.367	Tursiops_truncatus
ENSDARG00000001129	dicer1	97	78.807	ENSUAMG00000011912	DICER1	99	78.807	Ursus_americanus
ENSDARG00000001129	dicer1	100	79.435	ENSUMAG00000003027	DICER1	100	79.435	Ursus_maritimus
ENSDARG00000001129	dicer1	95	80.411	ENSVPAG00000006817	DICER1	94	80.411	Vicugna_pacos
ENSDARG00000001129	dicer1	100	79.162	ENSVVUG00000018855	DICER1	99	79.214	Vulpes_vulpes
ENSDARG00000001129	dicer1	100	77.610	ENSXETG00000023315	dicer1	99	77.969	Xenopus_tropicalis
ENSDARG00000001129	dicer1	94	95.595	ENSXCOG00000009353	dicer1	100	95.595	Xiphophorus_couchianus
ENSDARG00000001129	dicer1	100	80.073	ENSXMAG00000015721	dicer1	100	80.230	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000166	nucleotide binding	-	IEA	Function
GO:0003676	nucleic acid binding	-	IEA	Function
GO:0003723	RNA binding	-	IEA	Function
GO:0004386	helicase activity	-	IEA	Function
GO:0004518	nuclease activity	-	IEA	Function
GO:0004519	endonuclease activity	-	IEA	Function
GO:0004525	ribonuclease III activity	21873635.	IBA	Function
GO:0004525	ribonuclease III activity	-	IEA	Function
GO:0004530	deoxyribonuclease I activity	21873635.	IBA	Function
GO:0005524	ATP binding	-	IEA	Function
GO:0005634	nucleus	21873635.	IBA	Component
GO:0005737	cytoplasm	21873635.	IBA	Component
GO:0005737	cytoplasm	-	IEA	Component
GO:0006309	apoptotic DNA fragmentation	21873635.	IBA	Process
GO:0006396	RNA processing	-	IEA	Process
GO:0016442	RISC complex	21873635.	IBA	Component
GO:0016787	hydrolase activity	-	IEA	Function
GO:0016891	endoribonuclease activity, producing 5'-phosphomonoesters	-	IEA	Function
GO:0021591	ventricular system development	20448148.	IGI	Process
GO:0021591	ventricular system development	20448148.	IMP	Process
GO:0030422	production of siRNA involved in RNA interference	21873635.	IBA	Process
GO:0030422	production of siRNA involved in RNA interference	-	ISS	Process
GO:0030423	targeting of mRNA for destruction involved in RNA interference	-	ISS	Process
GO:0031047	gene silencing by RNA	-	IEA	Process
GO:0031054	pre-miRNA processing	21873635.	IBA	Process
GO:0031054	pre-miRNA processing	15774722.20448148.	IMP	Process
GO:0031054	pre-miRNA processing	-	ISS	Process
GO:0035068	micro-ribonucleoprotein complex	-	ISS	Component
GO:0035195	gene silencing by miRNA	16484454.	IMP	Process
GO:0035196	production of miRNAs involved in gene silencing by miRNA	14528306.20448148.	IMP	Process
GO:0035279	mRNA cleavage involved in gene silencing by miRNA	16484454.	IGI	Process
GO:0046872	metal ion binding	-	IEA	Function
GO:0050767	regulation of neurogenesis	25662174.	IMP	Process
GO:0070578	RISC-loading complex	-	ISS	Component
GO:0070883	pre-miRNA binding	20448148.	IDA	Function