EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000001829 (Gene tree)
Gene ID: 503771
Gene Symbol: zgc:112982
Alias: fb48h12|fb93h01|wu:fb48h12|wu:fb93h01
Full Name: zgc:112982
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Minus strand
Length: 16641 bases
Position: chr24:24101811-24118451
Accession: ZDB-GENE-050306-55
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000101451	THRAP3_BCLAF1	PF15440.6	3.4e-22	1	1
ENSDARP00000027078	THRAP3_BCLAF1	PF15440.6	5e-21	1	1
ENSDARP00000140712	THRAP3_BCLAF1	PF15440.6	1e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000160578	-	1413	-	ENSDARP00000140712	231 (aa)	-	A8E5E2
ENSDART00000111096	-	2888	XM_005162696	ENSDARP00000101451	763 (aa)	XP_005162753	F1R9R5
ENSDART00000144664	-	775	-	-	- (aa)	-	-
ENSDART00000024606	-	1761	-	ENSDARP00000027078	271 (aa)	-	F1QDG0
ENSDART00000146736	-	888	-	-	- (aa)	-	-

Gene Model

Click here to download ENSDARG00000001829's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000001829's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000001829	zgc:112982	55	37.500	ENSG00000173681	BCLAF3	68	35.802	Homo_sapiens
ENSDARG00000001829	zgc:112982	62	52.976	ENSACIG00000009107	zgc:112982	73	48.837	Amphilophus_citrinellus
ENSDARG00000001829	zgc:112982	77	56.140	ENSAMXG00000013954	-	98	54.622	Astyanax_mexicanus
ENSDARG00000001829	zgc:112982	86	54.918	ENSIPUG00000013837	-	99	51.429	Ictalurus_punctatus
ENSDARG00000001829	zgc:112982	61	55.233	ENSLBEG00000017147	-	85	48.889	Labrus_bergylta
ENSDARG00000001829	zgc:112982	59	56.548	ENSMZEG00005020613	-	68	56.364	Maylandia_zebra
ENSDARG00000001829	zgc:112982	57	57.051	ENSMMOG00000013104	zgc:112982	87	42.739	Mola_mola
ENSDARG00000001829	zgc:112982	61	57.229	ENSMALG00000017681	-	71	53.846	Monopterus_albus
ENSDARG00000001829	zgc:112982	86	45.868	ENSOMEG00000006057	-	93	46.087	Oryzias_melastigma
ENSDARG00000001829	zgc:112982	56	56.250	ENSPNYG00000024269	zgc:112982	69	54.494	Pundamilia_nyererei
ENSDARG00000001829	zgc:112982	73	59.512	ENSPNAG00000021161	zgc:112982	91	49.582	Pygocentrus_nattereri
ENSDARG00000001829	zgc:112982	55	50.000	ENSSFOG00015017263	cunhxorf23	52	36.712	Scleropages_formosus
ENSDARG00000001829	zgc:112982	59	53.143	ENSSMAG00000009714	-	99	44.891	Scophthalmus_maximus
ENSDARG00000001829	zgc:112982	58	36.420	ENSUAMG00000021444	-	67	33.742	Ursus_americanus
ENSDARG00000001829	zgc:112982	86	40.404	ENSXMAG00000010229	-	64	38.384	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0003674	molecular_function	-	ND	Function
GO:0005575	cellular_component	-	ND	Component