EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
  • Gene Ontology
Description
Ensembl ID
ENSDARG00000001857 (Gene tree)
Gene ID
556421
Gene Symbol
aff4
Alias
-
Full Name
AF4/FMR2 family%2C member 4
Gene Type
protein_coding
Species
Danio_rerio
Status
putative
Strand
Plus strand
Length
68057 bases
Position
chr21:43178817-43246873
Accession
ZDB-GENE-100910-5
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSDARP00000125884AF-4PF05110.13012
ENSDARP00000125884AF-4PF05110.13022
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSDART00000151748-3441XM_005173899ENSDARP000001258841083 (aa)XP_005173956I3ISK1
ENSDART00000151512-524-ENSDARP0000012622682 (aa)-I3ITG2
ENSDART00000151350-381--- (aa)--
Gene Model
Click here to download ENSDARG00000001857's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000001857's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSDARG00000001857aff49955.574ENSG00000072364AFF49956.757Homo_sapiens
ENSDARG00000001857aff48962.500ENSG00000172493AFF15954.023Homo_sapiens
ENSDARG00000001857aff49964.944ENSAPOG00000006096aff49965.783Acanthochromis_polyacanthus
ENSDARG00000001857aff49955.902ENSAMEG00000017764AFF49956.408Ailuropoda_melanoleuca
ENSDARG00000001857aff48656.061ENSAMEG00000003337AFF18255.882Ailuropoda_melanoleuca
ENSDARG00000001857aff46743.478ENSACIG00000022732aff25645.902Amphilophus_citrinellus
ENSDARG00000001857aff46454.628ENSACIG00000010525aff49356.285Amphilophus_citrinellus
ENSDARG00000001857aff49965.414ENSAOCG00000008476aff49965.444Amphiprion_ocellaris
ENSDARG00000001857aff49965.358ENSAPEG00000018275aff49965.047Amphiprion_percula
ENSDARG00000001857aff49964.401ENSATEG00000010963aff49965.081Anabas_testudineus
ENSDARG00000001857aff49957.757ENSAPLG00000011166AFF49957.095Anas_platyrhynchos
ENSDARG00000001857aff48663.077ENSAPLG00000004059AFF18362.121Anas_platyrhynchos
ENSDARG00000001857aff45951.042ENSAPLG00000003660-8052.857Anas_platyrhynchos
ENSDARG00000001857aff48137.414ENSACAG00000010688AFF27140.637Anolis_carolinensis
ENSDARG00000001857aff49958.151ENSACAG00000022605AFF49956.987Anolis_carolinensis
ENSDARG00000001857aff49955.481ENSANAG00000037761AFF49956.503Aotus_nancymaae
ENSDARG00000001857aff49964.237ENSACLG00000011879aff49964.322Astatotilapia_calliptera
ENSDARG00000001857aff49969.349ENSAMXG00000020137aff49969.919Astyanax_mexicanus
ENSDARG00000001857aff46662.500ENSBTAG00000018488AFF18362.500Bos_taurus
ENSDARG00000001857aff49956.155ENSBTAG00000009482AFF49956.661Bos_taurus
ENSDARG00000001857aff49955.602ENSCJAG00000013322AFF49956.540Callithrix_jacchus
ENSDARG00000001857aff49955.537ENSCAFG00000000930AFF49954.945Canis_familiaris
ENSDARG00000001857aff49955.865ENSCAFG00020000956AFF49955.321Canis_lupus_dingo
ENSDARG00000001857aff49956.203ENSCHIG00000015153AFF49956.540Capra_hircus
ENSDARG00000001857aff46661.111ENSCHIG00000008450AFF18361.111Capra_hircus
ENSDARG00000001857aff49955.265ENSTSYG00000014713AFF49956.192Carlito_syrichta
ENSDARG00000001857aff45949.782ENSCAPG00000013980AFF49946.638Cavia_aperea
ENSDARG00000001857aff49956.003ENSCPOG00000001814AFF49363.158Cavia_porcellus
ENSDARG00000001857aff48541.494ENSCPOG00000006346AFF36060.656Cavia_porcellus
ENSDARG00000001857aff46559.091ENSCCAG00000027623AFF15455.556Cebus_capucinus
ENSDARG00000001857aff49955.687ENSCCAG00000030353AFF49956.624Cebus_capucinus
ENSDARG00000001857aff49955.621ENSCATG00000044510AFF49956.213Cercocebus_atys
ENSDARG00000001857aff49956.647ENSCLAG00000013850AFF49957.252Chinchilla_lanigera
ENSDARG00000001857aff49956.034ENSCSAG00000013682AFF49956.371Chlorocebus_sabaeus
ENSDARG00000001857aff46863.889ENSCHOG00000000041AFF16663.889Choloepus_hoffmanni
ENSDARG00000001857aff48964.286ENSCHOG00000003138AFF49163.265Choloepus_hoffmanni
ENSDARG00000001857aff49934.884ENSCPBG00000005382AFF18565.278Chrysemys_picta_bellii
ENSDARG00000001857aff49955.949ENSCANG00000030350AFF49956.397Colobus_angolensis_palliatus
ENSDARG00000001857aff46562.500ENSCANG00000037514AFF18164.516Colobus_angolensis_palliatus
ENSDARG00000001857aff49954.899ENSCGRG00001016680Aff49956.540Cricetulus_griseus_chok1gshd
ENSDARG00000001857aff49954.361ENSCGRG00000008529Aff49955.838Cricetulus_griseus_crigri
ENSDARG00000001857aff46642.857ENSCGRG00000003408Aff36057.377Cricetulus_griseus_crigri
ENSDARG00000001857aff49962.489ENSCSEG00000017002aff49963.506Cynoglossus_semilaevis
ENSDARG00000001857aff49961.366ENSCVAG00000005218aff49961.798Cyprinodon_variegatus
ENSDARG00000001857aff47435.510ENSDNOG00000048783-5337.527Dasypus_novemcinctus
ENSDARG00000001857aff49956.371ENSDNOG00000016669AFF49956.540Dasypus_novemcinctus
ENSDARG00000001857aff45441.694ENSDORG00000007294Aff36062.295Dipodomys_ordii
ENSDARG00000001857aff48061.111ENSETEG00000014905AFF17361.111Echinops_telfairi
ENSDARG00000001857aff47079.845ENSETEG00000000128AFF46875.194Echinops_telfairi
ENSDARG00000001857aff46642.581ENSEASG00005018275AFF36742.581Equus_asinus_asinus
ENSDARG00000001857aff49955.640ENSEASG00005018361AFF49956.071Equus_asinus_asinus
ENSDARG00000001857aff49955.471ENSECAG00000011969AFF49955.902Equus_caballus
ENSDARG00000001857aff46641.458ENSECAG00000006249AFF36742.258Equus_caballus
ENSDARG00000001857aff48785.000ENSEEUG00000011214AFF48885.000Erinaceus_europaeus
ENSDARG00000001857aff47331.257ENSELUG00000019953-5335.590Esox_lucius
ENSDARG00000001857aff49966.954ENSELUG00000023871aff49188.627Esox_lucius
ENSDARG00000001857aff49955.855ENSFCAG00000012425AFF49956.408Felis_catus
ENSDARG00000001857aff46559.722ENSFCAG00000029806AFF18359.722Felis_catus
ENSDARG00000001857aff48951.899ENSFALG00000005554AFF18455.714Ficedula_albicollis
ENSDARG00000001857aff49763.846ENSFALG00000008916AFF49265.517Ficedula_albicollis
ENSDARG00000001857aff49956.478ENSFDAG00000005342AFF49956.913Fukomys_damarensis
ENSDARG00000001857aff49960.273ENSFHEG00000004526aff49961.092Fundulus_heteroclitus
ENSDARG00000001857aff48967.557ENSGMOG00000008803aff49067.176Gadus_morhua
ENSDARG00000001857aff49936.768ENSGALG00000009168AFF27953.226Gallus_gallus
ENSDARG00000001857aff49957.337ENSGALG00000030147AFF410057.434Gallus_gallus
ENSDARG00000001857aff49961.585ENSGAFG00000005288aff49961.744Gambusia_affinis
ENSDARG00000001857aff49962.840ENSGACG00000020734aff410063.644Gasterosteus_aculeatus
ENSDARG00000001857aff49957.988ENSGAGG00000020214AFF410057.578Gopherus_agassizii
ENSDARG00000001857aff47054.015ENSGGOG00000010543AFF26052.920Gorilla_gorilla
ENSDARG00000001857aff49955.574ENSGGOG00000011786AFF49956.841Gorilla_gorilla
ENSDARG00000001857aff49964.151ENSHBUG00000021987aff49964.322Haplochromis_burtoni
ENSDARG00000001857aff49956.467ENSHGLG00000006661AFF49957.409Heterocephalus_glaber_female
ENSDARG00000001857aff49955.838ENSHGLG00100018576AFF49956.780Heterocephalus_glaber_male
ENSDARG00000001857aff45142.984ENSHCOG00000004812aff25945.902Hippocampus_comes
ENSDARG00000001857aff49963.753ENSHCOG00000016280aff49964.897Hippocampus_comes
ENSDARG00000001857aff49966.173ENSIPUG00000011689aff49965.767Ictalurus_punctatus
ENSDARG00000001857aff49956.514ENSSTOG00000026695AFF49364.912Ictidomys_tridecemlineatus
ENSDARG00000001857aff49261.111ENSSTOG00000006530AFF18361.111Ictidomys_tridecemlineatus
ENSDARG00000001857aff46542.809ENSSTOG00000012140AFF35662.295Ictidomys_tridecemlineatus
ENSDARG00000001857aff48763.934ENSJJAG00000013155Aff36063.934Jaculus_jaculus
ENSDARG00000001857aff49957.337ENSJJAG00000000912Aff49956.489Jaculus_jaculus
ENSDARG00000001857aff49962.146ENSKMAG00000010443aff49961.446Kryptolebias_marmoratus
ENSDARG00000001857aff49964.231ENSLBEG00000017778aff49965.675Labrus_bergylta
ENSDARG00000001857aff49356.962ENSLACG00000007303AFF18361.429Latimeria_chalumnae
ENSDARG00000001857aff49956.986ENSLACG00000008849AFF49957.373Latimeria_chalumnae
ENSDARG00000001857aff49964.766ENSLOCG00000010610aff49964.881Lepisosteus_oculatus
ENSDARG00000001857aff49956.287ENSLAFG00000010555AFF49956.203Loxodonta_africana
ENSDARG00000001857aff47353.650ENSLAFG00000018691AFF28845.205Loxodonta_africana
ENSDARG00000001857aff48463.934ENSLAFG00000012884AFF35063.934Loxodonta_africana
ENSDARG00000001857aff49955.659ENSMFAG00000034615AFF49956.250Macaca_fascicularis
ENSDARG00000001857aff49955.659ENSMMUG00000015640AFF49956.250Macaca_mulatta
ENSDARG00000001857aff49955.659ENSMNEG00000033381AFF49956.250Macaca_nemestrina
ENSDARG00000001857aff49955.076ENSMLEG00000028953AFF49955.076Mandrillus_leucophaeus
ENSDARG00000001857aff49964.364ENSMAMG00000021453aff49965.093Mastacembelus_armatus
ENSDARG00000001857aff49964.237ENSMZEG00005003218aff49964.322Maylandia_zebra
ENSDARG00000001857aff49957.975ENSMGAG00000009144AFF410057.566Meleagris_gallopavo
ENSDARG00000001857aff45453.091ENSMGAG00000008246-7550.890Meleagris_gallopavo
ENSDARG00000001857aff48754.251ENSMAUG00000013669Aff49768.657Mesocricetus_auratus
ENSDARG00000001857aff49955.254ENSMICG00000002753-9955.085Microcebus_murinus
ENSDARG00000001857aff47842.213ENSMICG00000016001AFF36242.038Microcebus_murinus
ENSDARG00000001857aff49955.415ENSMOCG00000003884Aff49955.976Microtus_ochrogaster
ENSDARG00000001857aff46940.336ENSMMOG00000010019aff25447.541Mola_mola
ENSDARG00000001857aff49956.408ENSMODG00000013842AFF49955.696Monodelphis_domestica
ENSDARG00000001857aff49964.007ENSMALG00000017690aff49965.081Monopterus_albus
ENSDARG00000001857aff46566.154MGP_CAROLIEiJ_G0027469Aff18465.278Mus_caroli
ENSDARG00000001857aff49956.186MGP_CAROLIEiJ_G0016331Aff49364.912Mus_caroli
ENSDARG00000001857aff47259.016ENSMUSG00000037138Aff35159.016Mus_musculus
ENSDARG00000001857aff49956.430ENSMUSG00000049470Aff49364.912Mus_musculus
ENSDARG00000001857aff49956.345MGP_PahariEiJ_G0017466Aff49364.912Mus_pahari
ENSDARG00000001857aff47459.016MGP_PahariEiJ_G0027310Aff35159.016Mus_pahari
ENSDARG00000001857aff49956.430MGP_SPRETEiJ_G0017175Aff49364.912Mus_spretus
ENSDARG00000001857aff47259.016MGP_SPRETEiJ_G0014867Aff35159.016Mus_spretus
ENSDARG00000001857aff49954.500ENSMPUG00000010316AFF49955.341Mustela_putorius_furo
ENSDARG00000001857aff48559.091ENSMLUG00000000293AFF18459.091Myotis_lucifugus
ENSDARG00000001857aff49955.902ENSMLUG00000015081AFF49956.745Myotis_lucifugus
ENSDARG00000001857aff48135.652ENSNGAG00000002408Aff35162.295Nannospalax_galili
ENSDARG00000001857aff49955.471ENSNGAG00000019867Aff49955.753Nannospalax_galili
ENSDARG00000001857aff45269.945ENSNBRG00000006303aff49789.600Neolamprologus_brichardi
ENSDARG00000001857aff49955.612ENSNLEG00000012874AFF49957.046Nomascus_leucogenys
ENSDARG00000001857aff47758.673ENSMEUG00000006620-7657.398Notamacropus_eugenii
ENSDARG00000001857aff47885.366ENSOPRG00000014519AFF47285.366Ochotona_princeps
ENSDARG00000001857aff49956.588ENSODEG00000008137AFF49957.627Octodon_degus
ENSDARG00000001857aff49964.347ENSONIG00000008446aff49964.519Oreochromis_niloticus
ENSDARG00000001857aff49956.108ENSOANG00000007428AFF49555.987Ornithorhynchus_anatinus
ENSDARG00000001857aff48762.500ENSOANG00000013624AFF18662.500Ornithorhynchus_anatinus
ENSDARG00000001857aff45756.204ENSOANG00000001095-6756.204Ornithorhynchus_anatinus
ENSDARG00000001857aff46653.247ENSOCUG00000002105AFF17957.353Oryctolagus_cuniculus
ENSDARG00000001857aff49955.865ENSOCUG00000013635AFF49956.624Oryctolagus_cuniculus
ENSDARG00000001857aff49961.831ENSORLG00000001361aff49960.742Oryzias_latipes
ENSDARG00000001857aff49961.917ENSORLG00020020601aff49960.742Oryzias_latipes_hni
ENSDARG00000001857aff49961.971ENSORLG00015004684aff49960.967Oryzias_latipes_hsok
ENSDARG00000001857aff49961.479ENSOMEG00000005078aff49959.657Oryzias_melastigma
ENSDARG00000001857aff48752.941ENSOMEG00000005799-5452.941Oryzias_melastigma
ENSDARG00000001857aff49954.553ENSOGAG00000028482AFF49955.565Otolemur_garnettii
ENSDARG00000001857aff49956.287ENSOARG00000013406AFF49956.624Ovis_aries
ENSDARG00000001857aff46559.091ENSOARG00000004522AFF18359.091Ovis_aries
ENSDARG00000001857aff49955.236ENSPPAG00000043255AFF49958.524Pan_paniscus
ENSDARG00000001857aff46558.333ENSPPRG00000023590AFF18358.333Panthera_pardus
ENSDARG00000001857aff49955.818ENSPPRG00000016213AFF49956.745Panthera_pardus
ENSDARG00000001857aff49955.818ENSPTIG00000016209AFF49956.745Panthera_tigris_altaica
ENSDARG00000001857aff48864.516ENSPTRG00000016255AFF15162.319Pan_troglodytes
ENSDARG00000001857aff49955.236ENSPTRG00000017228AFF49958.524Pan_troglodytes
ENSDARG00000001857aff49955.236ENSPTRG00000046486-9958.524Pan_troglodytes
ENSDARG00000001857aff49955.659ENSPANG00000007039AFF49956.250Papio_anubis
ENSDARG00000001857aff49961.747ENSPKIG00000024325AFF49961.934Paramormyrops_kingsleyae
ENSDARG00000001857aff49962.435ENSPKIG00000024249AFF49961.578Paramormyrops_kingsleyae
ENSDARG00000001857aff47138.419ENSPSIG00000010309AFF29637.402Pelodiscus_sinensis
ENSDARG00000001857aff49957.409ENSPSIG00000013003AFF410056.913Pelodiscus_sinensis
ENSDARG00000001857aff49358.025ENSPSIG00000003759AFF18362.500Pelodiscus_sinensis
ENSDARG00000001857aff46159.915ENSPMGG00000006477aff49961.029Periophthalmus_magnuspinnatus
ENSDARG00000001857aff47257.377ENSPEMG00000014802Aff36057.377Peromyscus_maniculatus_bairdii
ENSDARG00000001857aff49955.245ENSPEMG00000007995Aff49956.599Peromyscus_maniculatus_bairdii
ENSDARG00000001857aff49956.577ENSPCIG00000000197AFF49956.324Phascolarctos_cinereus
ENSDARG00000001857aff49961.711ENSPFOG00000007079aff49962.230Poecilia_formosa
ENSDARG00000001857aff49961.565ENSPLAG00000001837aff49962.174Poecilia_latipinna
ENSDARG00000001857aff49961.658ENSPMEG00000005613aff49962.176Poecilia_mexicana
ENSDARG00000001857aff49961.772ENSPREG00000005287aff49962.294Poecilia_reticulata
ENSDARG00000001857aff49955.527ENSPPYG00000015775AFF49956.878Pongo_abelii
ENSDARG00000001857aff48665.116ENSPCAG00000003995AFF49455.236Procavia_capensis
ENSDARG00000001857aff47257.447ENSPCAG00000005658AFF16257.447Procavia_capensis
ENSDARG00000001857aff49954.844ENSPCOG00000023876AFF49957.668Propithecus_coquereli
ENSDARG00000001857aff48456.338ENSPVAG00000006595AFF35156.338Pteropus_vampyrus
ENSDARG00000001857aff48362.500ENSPVAG00000014455AFF17962.500Pteropus_vampyrus
ENSDARG00000001857aff49955.265ENSPVAG00000015204AFF49956.108Pteropus_vampyrus
ENSDARG00000001857aff49964.151ENSPNYG00000014804aff49964.322Pundamilia_nyererei
ENSDARG00000001857aff49968.265ENSPNAG00000004777aff49970.105Pygocentrus_nattereri
ENSDARG00000001857aff49955.395ENSRNOG00000006965Aff49957.167Rattus_norvegicus
ENSDARG00000001857aff47159.016ENSRNOG00000018830Aff35155.224Rattus_norvegicus
ENSDARG00000001857aff49954.100ENSRBIG00000029376AFF49955.030Rhinopithecus_bieti
ENSDARG00000001857aff49955.865ENSRROG00000033812AFF49956.456Rhinopithecus_roxellana
ENSDARG00000001857aff49955.602ENSSBOG00000021562AFF49956.456Saimiri_boliviensis_boliviensis
ENSDARG00000001857aff49957.131ENSSHAG00000013198AFF49955.997Sarcophilus_harrisii
ENSDARG00000001857aff46163.248ENSSFOG00015000846AFF49861.232Scleropages_formosus
ENSDARG00000001857aff49964.000ENSSFOG00015018646aff49964.599Scleropages_formosus
ENSDARG00000001857aff49964.340ENSSMAG00000004734aff49965.700Scophthalmus_maximus
ENSDARG00000001857aff49963.868ENSSDUG00000019498aff49965.734Seriola_dumerili
ENSDARG00000001857aff49963.652ENSSLDG00000007683aff49965.529Seriola_lalandi_dorsalis
ENSDARG00000001857aff47369.286ENSSARG00000011190AFF47069.286Sorex_araneus
ENSDARG00000001857aff48852.874ENSSPUG00000001574AFF18260.000Sphenodon_punctatus
ENSDARG00000001857aff49957.167ENSSPUG00000012215AFF410055.556Sphenodon_punctatus
ENSDARG00000001857aff46765.000ENSSPAG00000012370aff49967.862Stegastes_partitus
ENSDARG00000001857aff49955.818ENSSSCG00000014291AFF49956.492Sus_scrofa
ENSDARG00000001857aff47459.551ENSTGUG00000004690AFF26359.551Taeniopygia_guttata
ENSDARG00000001857aff48853.846ENSTGUG00000002726AFF18453.030Taeniopygia_guttata
ENSDARG00000001857aff49957.568ENSTGUG00000000187AFF410057.325Taeniopygia_guttata
ENSDARG00000001857aff49965.901ENSTRUG00000008087aff49965.106Takifugu_rubripes
ENSDARG00000001857aff49964.686ENSTNIG00000018201aff49964.974Tetraodon_nigroviridis
ENSDARG00000001857aff47658.270ENSTBEG00000012172AFF46357.506Tupaia_belangeri
ENSDARG00000001857aff49955.059ENSTTRG00000014729AFF49955.312Tursiops_truncatus
ENSDARG00000001857aff46661.111ENSTTRG00000005595AFF18361.111Tursiops_truncatus
ENSDARG00000001857aff49956.071ENSUAMG00000025984AFF49956.998Ursus_americanus
ENSDARG00000001857aff48055.725ENSUMAG00000009395AFF26752.747Ursus_maritimus
ENSDARG00000001857aff49954.669ENSUMAG00000017952AFF49954.885Ursus_maritimus
ENSDARG00000001857aff49955.396ENSVPAG00000007247AFF49955.949Vicugna_pacos
ENSDARG00000001857aff48659.722ENSVPAG00000004007AFF18559.722Vicugna_pacos
ENSDARG00000001857aff49956.371ENSVVUG00000024524AFF49956.456Vulpes_vulpes
ENSDARG00000001857aff49954.390ENSXETG00000004169aff49955.359Xenopus_tropicalis
ENSDARG00000001857aff49154.406ENSXETG00000019630aff26554.406Xenopus_tropicalis
ENSDARG00000001857aff46158.739ENSXCOG00000006385aff49661.896Xiphophorus_couchianus
ENSDARG00000001857aff49962.134ENSXMAG00000001642aff49962.209Xiphophorus_maculatus
Gene Ontology
Go IDGo_termPubmedIDEvidenceCategory
GO:0003690double-stranded DNA binding21873635.IBAFunction
GO:0003700DNA-binding transcription factor activity21873635.IBAFunction
GO:0005634nucleus21873635.IBAComponent
GO:0008023transcription elongation factor complex21873635.IBAComponent
GO:0032783ELL-EAF complex21873635.IBAComponent

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