EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000002267 (Gene tree)
Gene ID: 393097
Gene Symbol: dcaf13
Alias: wdsof1|zgc:55391
Full Name: ddb1 and cul4 associated factor 13
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Minus strand
Length: 20586 bases
Position: chr16:44653266-44673851
Accession: ZDB-GENE-040426-703
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000028109	Sof1	PF04158.14	9.3e-33	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000015139	-	1740	-	ENSDARP00000028109	445 (aa)	-	F1Q6C8
ENSDART00000139307	-	788	-	-	- (aa)	-	-
ENSDART00000148355	-	694	-	-	- (aa)	-	-

Gene Model

Click here to download ENSDARG00000002267's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000002267's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000002267	dcaf13	98	74.483	ENSG00000164934	DCAF13	100	76.042	Homo_sapiens
ENSDARG00000002267	dcaf13	100	81.348	ENSAPOG00000000524	dcaf13	100	81.348	Acanthochromis_polyacanthus
ENSDARG00000002267	dcaf13	100	73.483	ENSAMEG00000001595	DCAF13	99	73.483	Ailuropoda_melanoleuca
ENSDARG00000002267	dcaf13	100	80.225	ENSACIG00000003110	dcaf13	99	80.225	Amphilophus_citrinellus
ENSDARG00000002267	dcaf13	100	81.124	ENSAOCG00000011982	dcaf13	100	81.124	Amphiprion_ocellaris
ENSDARG00000002267	dcaf13	95	76.112	ENSAPEG00000021156	dcaf13	95	76.112	Amphiprion_percula
ENSDARG00000002267	dcaf13	100	80.225	ENSATEG00000024751	dcaf13	100	80.225	Anabas_testudineus
ENSDARG00000002267	dcaf13	95	76.123	ENSAPLG00000002811	DCAF13	95	76.123	Anas_platyrhynchos
ENSDARG00000002267	dcaf13	100	74.831	ENSACAG00000009465	DCAF13	100	74.831	Anolis_carolinensis
ENSDARG00000002267	dcaf13	100	58.202	ENSANAG00000023472	-	100	58.202	Aotus_nancymaae
ENSDARG00000002267	dcaf13	100	74.382	ENSANAG00000020798	DCAF13	100	74.382	Aotus_nancymaae
ENSDARG00000002267	dcaf13	100	80.899	ENSACLG00000025212	dcaf13	90	80.899	Astatotilapia_calliptera
ENSDARG00000002267	dcaf13	100	86.742	ENSAMXG00000037008	dcaf13	100	86.742	Astyanax_mexicanus
ENSDARG00000002267	dcaf13	98	75.172	ENSBTAG00000021449	DCAF13	100	75.056	Bos_taurus
ENSDARG00000002267	dcaf13	94	50.597	WBGene00022742	ZK430.7	93	50.597	Caenorhabditis_elegans
ENSDARG00000002267	dcaf13	98	74.713	ENSCJAG00000016181	DCAF13	100	74.607	Callithrix_jacchus
ENSDARG00000002267	dcaf13	100	75.056	ENSCAFG00000000663	DCAF13	100	75.056	Canis_familiaris
ENSDARG00000002267	dcaf13	100	75.056	ENSCAFG00020003044	DCAF13	100	75.056	Canis_lupus_dingo
ENSDARG00000002267	dcaf13	100	75.056	ENSCHIG00000020556	DCAF13	100	75.056	Capra_hircus
ENSDARG00000002267	dcaf13	100	73.034	ENSTSYG00000003307	DCAF13	100	73.034	Carlito_syrichta
ENSDARG00000002267	dcaf13	95	67.773	ENSCAPG00000007305	DCAF13	100	66.271	Cavia_aperea
ENSDARG00000002267	dcaf13	100	73.708	ENSCPOG00000012291	DCAF13	100	73.708	Cavia_porcellus
ENSDARG00000002267	dcaf13	100	73.258	ENSCCAG00000033103	DCAF13	76	73.258	Cebus_capucinus
ENSDARG00000002267	dcaf13	100	74.607	ENSCATG00000032160	DCAF13	85	74.607	Cercocebus_atys
ENSDARG00000002267	dcaf13	100	52.135	ENSCATG00000037371	-	96	52.135	Cercocebus_atys
ENSDARG00000002267	dcaf13	100	73.933	ENSCLAG00000006565	DCAF13	100	73.933	Chinchilla_lanigera
ENSDARG00000002267	dcaf13	100	74.607	ENSCSAG00000011887	DCAF13	100	74.607	Chlorocebus_sabaeus
ENSDARG00000002267	dcaf13	72	61.755	ENSCHOG00000003007	-	74	61.755	Choloepus_hoffmanni
ENSDARG00000002267	dcaf13	100	74.607	ENSCPBG00000026050	DCAF13	100	74.607	Chrysemys_picta_bellii
ENSDARG00000002267	dcaf13	99	61.991	ENSCING00000005282	-	99	61.991	Ciona_intestinalis
ENSDARG00000002267	dcaf13	100	62.108	ENSCSAVG00000006538	-	100	62.108	Ciona_savignyi
ENSDARG00000002267	dcaf13	100	65.843	ENSCANG00000043032	DCAF13	76	65.843	Colobus_angolensis_palliatus
ENSDARG00000002267	dcaf13	100	52.584	ENSCANG00000038828	-	96	52.584	Colobus_angolensis_palliatus
ENSDARG00000002267	dcaf13	100	75.506	ENSCGRG00001023256	Dcaf13	100	75.506	Cricetulus_griseus_chok1gshd
ENSDARG00000002267	dcaf13	96	74.648	ENSCGRG00000004862	Dcaf13	92	74.648	Cricetulus_griseus_crigri
ENSDARG00000002267	dcaf13	100	79.775	ENSCSEG00000013595	dcaf13	100	79.775	Cynoglossus_semilaevis
ENSDARG00000002267	dcaf13	100	69.663	ENSCVAG00000010337	dcaf13	100	69.663	Cyprinodon_variegatus
ENSDARG00000002267	dcaf13	81	73.961	ENSDNOG00000044885	DCAF13	95	73.961	Dasypus_novemcinctus
ENSDARG00000002267	dcaf13	100	70.404	ENSDORG00000011873	Dcaf13	100	70.404	Dipodomys_ordii
ENSDARG00000002267	dcaf13	99	59.594	FBgn0036500	CG7275	99	59.594	Drosophila_melanogaster
ENSDARG00000002267	dcaf13	100	70.246	ENSETEG00000004777	DCAF13	77	70.246	Echinops_telfairi
ENSDARG00000002267	dcaf13	99	58.730	ENSEBUG00000008116	dcaf13	99	58.730	Eptatretus_burgeri
ENSDARG00000002267	dcaf13	100	74.607	ENSEASG00005001266	DCAF13	100	74.607	Equus_asinus_asinus
ENSDARG00000002267	dcaf13	100	74.607	ENSECAG00000009654	DCAF13	100	74.607	Equus_caballus
ENSDARG00000002267	dcaf13	100	63.982	ENSEEUG00000003286	DCAF13	77	63.982	Erinaceus_europaeus
ENSDARG00000002267	dcaf13	100	71.236	ENSELUG00000006191	dcaf13	99	77.887	Esox_lucius
ENSDARG00000002267	dcaf13	100	75.056	ENSFCAG00000027256	DCAF13	100	75.056	Felis_catus
ENSDARG00000002267	dcaf13	100	75.281	ENSFALG00000005982	DCAF13	100	75.281	Ficedula_albicollis
ENSDARG00000002267	dcaf13	100	73.258	ENSFDAG00000014869	DCAF13	100	73.258	Fukomys_damarensis
ENSDARG00000002267	dcaf13	100	79.775	ENSFHEG00000009965	dcaf13	100	79.775	Fundulus_heteroclitus
ENSDARG00000002267	dcaf13	100	80.225	ENSGMOG00000005753	dcaf13	100	80.225	Gadus_morhua
ENSDARG00000002267	dcaf13	100	75.506	ENSGALG00000034618	DCAF13	79	75.506	Gallus_gallus
ENSDARG00000002267	dcaf13	94	79.856	ENSGAFG00000000368	dcaf13	88	79.856	Gambusia_affinis
ENSDARG00000002267	dcaf13	100	80.899	ENSGACG00000004840	dcaf13	100	80.899	Gasterosteus_aculeatus
ENSDARG00000002267	dcaf13	100	75.730	ENSGAGG00000025283	DCAF13	100	75.730	Gopherus_agassizii
ENSDARG00000002267	dcaf13	93	74.515	ENSGGOG00000015124	DCAF13	79	74.408	Gorilla_gorilla
ENSDARG00000002267	dcaf13	100	80.449	ENSHBUG00000015794	dcaf13	90	80.449	Haplochromis_burtoni
ENSDARG00000002267	dcaf13	100	73.483	ENSHGLG00000008862	DCAF13	100	73.483	Heterocephalus_glaber_female
ENSDARG00000002267	dcaf13	100	73.258	ENSHGLG00100017157	DCAF13	100	73.258	Heterocephalus_glaber_male
ENSDARG00000002267	dcaf13	100	79.551	ENSHCOG00000014302	dcaf13	100	79.551	Hippocampus_comes
ENSDARG00000002267	dcaf13	100	87.865	ENSIPUG00000022430	dcaf13	100	87.865	Ictalurus_punctatus
ENSDARG00000002267	dcaf13	98	74.483	ENSSTOG00000008009	DCAF13	100	74.382	Ictidomys_tridecemlineatus
ENSDARG00000002267	dcaf13	88	74.103	ENSJJAG00000000742	-	100	74.103	Jaculus_jaculus
ENSDARG00000002267	dcaf13	100	69.888	ENSJJAG00000001990	-	100	69.888	Jaculus_jaculus
ENSDARG00000002267	dcaf13	100	80.674	ENSKMAG00000002350	dcaf13	100	80.674	Kryptolebias_marmoratus
ENSDARG00000002267	dcaf13	100	80.674	ENSLBEG00000002441	dcaf13	100	80.674	Labrus_bergylta
ENSDARG00000002267	dcaf13	100	79.101	ENSLACG00000013358	DCAF13	100	79.101	Latimeria_chalumnae
ENSDARG00000002267	dcaf13	100	77.303	ENSLOCG00000009498	dcaf13	100	77.303	Lepisosteus_oculatus
ENSDARG00000002267	dcaf13	100	75.056	ENSLAFG00000009807	DCAF13	100	75.056	Loxodonta_africana
ENSDARG00000002267	dcaf13	100	71.685	ENSMFAG00000043378	-	100	71.685	Macaca_fascicularis
ENSDARG00000002267	dcaf13	100	74.382	ENSMFAG00000008982	-	77	74.382	Macaca_fascicularis
ENSDARG00000002267	dcaf13	100	74.157	ENSMMUG00000019594	-	100	74.157	Macaca_mulatta
ENSDARG00000002267	dcaf13	80	72.549	ENSMMUG00000019405	-	70	72.549	Macaca_mulatta
ENSDARG00000002267	dcaf13	100	52.809	ENSMNEG00000030562	-	96	52.809	Macaca_nemestrina
ENSDARG00000002267	dcaf13	100	64.045	ENSMNEG00000033963	-	75	64.045	Macaca_nemestrina
ENSDARG00000002267	dcaf13	100	72.809	ENSMNEG00000035898	-	100	72.809	Macaca_nemestrina
ENSDARG00000002267	dcaf13	100	54.382	ENSMLEG00000039177	-	100	54.382	Mandrillus_leucophaeus
ENSDARG00000002267	dcaf13	100	74.607	ENSMLEG00000041996	DCAF13	100	74.607	Mandrillus_leucophaeus
ENSDARG00000002267	dcaf13	100	80.449	ENSMAMG00000003196	dcaf13	100	80.449	Mastacembelus_armatus
ENSDARG00000002267	dcaf13	100	80.899	ENSMZEG00005012249	dcaf13	90	80.899	Maylandia_zebra
ENSDARG00000002267	dcaf13	95	75.592	ENSMGAG00000012340	DCAF13	99	75.592	Meleagris_gallopavo
ENSDARG00000002267	dcaf13	100	64.719	ENSMAUG00000017580	Dcaf13	100	64.719	Mesocricetus_auratus
ENSDARG00000002267	dcaf13	98	74.713	ENSMICG00000006907	DCAF13	100	74.607	Microcebus_murinus
ENSDARG00000002267	dcaf13	100	74.382	ENSMOCG00000011609	Dcaf13	100	74.382	Microtus_ochrogaster
ENSDARG00000002267	dcaf13	100	80.674	ENSMMOG00000017905	dcaf13	100	80.674	Mola_mola
ENSDARG00000002267	dcaf13	100	73.258	ENSMODG00000005549	DCAF13	100	73.258	Monodelphis_domestica
ENSDARG00000002267	dcaf13	100	81.124	ENSMALG00000007415	dcaf13	100	81.124	Monopterus_albus
ENSDARG00000002267	dcaf13	100	75.506	MGP_CAROLIEiJ_G0019757	Dcaf13	100	75.506	Mus_caroli
ENSDARG00000002267	dcaf13	100	75.281	ENSMUSG00000022300	Dcaf13	100	75.281	Mus_musculus
ENSDARG00000002267	dcaf13	100	75.506	MGP_PahariEiJ_G0019766	Dcaf13	100	75.506	Mus_pahari
ENSDARG00000002267	dcaf13	100	75.506	MGP_SPRETEiJ_G0020654	Dcaf13	100	75.506	Mus_spretus
ENSDARG00000002267	dcaf13	91	67.574	ENSMPUG00000004976	-	98	67.574	Mustela_putorius_furo
ENSDARG00000002267	dcaf13	98	75.172	ENSMLUG00000007375	DCAF13	100	75.056	Myotis_lucifugus
ENSDARG00000002267	dcaf13	100	75.955	ENSNGAG00000021670	Dcaf13	100	75.955	Nannospalax_galili
ENSDARG00000002267	dcaf13	100	80.674	ENSNBRG00000007078	dcaf13	100	80.674	Neolamprologus_brichardi
ENSDARG00000002267	dcaf13	100	53.258	ENSNLEG00000032043	-	100	53.258	Nomascus_leucogenys
ENSDARG00000002267	dcaf13	98	74.483	ENSNLEG00000003791	DCAF13	75	74.382	Nomascus_leucogenys
ENSDARG00000002267	dcaf13	76	74.286	ENSMEUG00000014697	-	80	74.286	Notamacropus_eugenii
ENSDARG00000002267	dcaf13	100	74.382	ENSODEG00000000870	DCAF13	100	74.382	Octodon_degus
ENSDARG00000002267	dcaf13	100	80.449	ENSONIG00000000142	dcaf13	100	80.449	Oreochromis_niloticus
ENSDARG00000002267	dcaf13	100	74.382	ENSOCUG00000009197	DCAF13	100	74.382	Oryctolagus_cuniculus
ENSDARG00000002267	dcaf13	100	81.348	ENSORLG00000002363	dcaf13	100	81.348	Oryzias_latipes
ENSDARG00000002267	dcaf13	100	81.124	ENSORLG00020001143	dcaf13	100	81.124	Oryzias_latipes_hni
ENSDARG00000002267	dcaf13	100	80.899	ENSORLG00015015911	dcaf13	100	80.899	Oryzias_latipes_hsok
ENSDARG00000002267	dcaf13	100	82.022	ENSOMEG00000006040	dcaf13	100	82.022	Oryzias_melastigma
ENSDARG00000002267	dcaf13	98	75.172	ENSOGAG00000002277	DCAF13	100	75.056	Otolemur_garnettii
ENSDARG00000002267	dcaf13	100	74.831	ENSOARG00000016227	DCAF13	100	74.831	Ovis_aries
ENSDARG00000002267	dcaf13	98	74.023	ENSPPAG00000029408	DCAF13	75	73.933	Pan_paniscus
ENSDARG00000002267	dcaf13	100	74.831	ENSPPRG00000005766	DCAF13	100	74.831	Panthera_pardus
ENSDARG00000002267	dcaf13	100	75.056	ENSPTIG00000016790	DCAF13	100	75.056	Panthera_tigris_altaica
ENSDARG00000002267	dcaf13	98	74.253	ENSPTRG00000020493	DCAF13	75	74.157	Pan_troglodytes
ENSDARG00000002267	dcaf13	100	72.135	ENSPANG00000026479	-	100	72.135	Papio_anubis
ENSDARG00000002267	dcaf13	100	74.607	ENSPANG00000010643	-	77	74.607	Papio_anubis
ENSDARG00000002267	dcaf13	100	79.775	ENSPKIG00000017471	dcaf13	100	79.775	Paramormyrops_kingsleyae
ENSDARG00000002267	dcaf13	100	72.584	ENSPSIG00000016768	DCAF13	100	72.584	Pelodiscus_sinensis
ENSDARG00000002267	dcaf13	100	76.404	ENSPMGG00000022144	dcaf13	100	76.404	Periophthalmus_magnuspinnatus
ENSDARG00000002267	dcaf13	100	75.730	ENSPEMG00000011958	Dcaf13	100	75.730	Peromyscus_maniculatus_bairdii
ENSDARG00000002267	dcaf13	100	73.258	ENSPCIG00000026186	DCAF13	100	73.258	Phascolarctos_cinereus
ENSDARG00000002267	dcaf13	100	79.775	ENSPFOG00000019444	dcaf13	100	79.775	Poecilia_formosa
ENSDARG00000002267	dcaf13	100	79.775	ENSPLAG00000015924	dcaf13	100	79.775	Poecilia_latipinna
ENSDARG00000002267	dcaf13	100	79.775	ENSPMEG00000004022	dcaf13	100	79.775	Poecilia_mexicana
ENSDARG00000002267	dcaf13	100	79.775	ENSPREG00000016063	dcaf13	100	79.775	Poecilia_reticulata
ENSDARG00000002267	dcaf13	98	74.943	ENSPPYG00000018809	-	100	74.831	Pongo_abelii
ENSDARG00000002267	dcaf13	98	71.264	ENSPCAG00000007620	DCAF13	75	71.236	Procavia_capensis
ENSDARG00000002267	dcaf13	97	70.302	ENSPCOG00000028064	-	100	70.295	Propithecus_coquereli
ENSDARG00000002267	dcaf13	100	73.933	ENSPVAG00000017178	DCAF13	76	73.933	Pteropus_vampyrus
ENSDARG00000002267	dcaf13	100	80.674	ENSPNYG00000003861	dcaf13	100	80.674	Pundamilia_nyererei
ENSDARG00000002267	dcaf13	100	87.416	ENSPNAG00000010091	dcaf13	100	87.416	Pygocentrus_nattereri
ENSDARG00000002267	dcaf13	100	74.607	ENSRNOG00000004301	Dcaf13	100	74.607	Rattus_norvegicus
ENSDARG00000002267	dcaf13	100	74.831	ENSRBIG00000032300	DCAF13	85	74.831	Rhinopithecus_bieti
ENSDARG00000002267	dcaf13	98	52.511	ENSRROG00000032221	-	98	52.511	Rhinopithecus_roxellana
ENSDARG00000002267	dcaf13	100	74.607	ENSRROG00000040442	DCAF13	100	74.607	Rhinopithecus_roxellana
ENSDARG00000002267	dcaf13	99	45.940	YLL011W	-	95	45.940	Saccharomyces_cerevisiae
ENSDARG00000002267	dcaf13	100	74.607	ENSSBOG00000025597	DCAF13	100	74.607	Saimiri_boliviensis_boliviensis
ENSDARG00000002267	dcaf13	100	71.910	ENSSHAG00000006588	DCAF13	100	71.910	Sarcophilus_harrisii
ENSDARG00000002267	dcaf13	100	80.225	ENSSFOG00015006138	dcaf13	100	80.225	Scleropages_formosus
ENSDARG00000002267	dcaf13	100	80.899	ENSSMAG00000009568	dcaf13	100	80.899	Scophthalmus_maximus
ENSDARG00000002267	dcaf13	100	81.124	ENSSLDG00000010517	dcaf13	100	81.124	Seriola_lalandi_dorsalis
ENSDARG00000002267	dcaf13	100	75.056	ENSSPUG00000009148	DCAF13	100	75.056	Sphenodon_punctatus
ENSDARG00000002267	dcaf13	100	81.124	ENSSPAG00000019890	dcaf13	100	81.124	Stegastes_partitus
ENSDARG00000002267	dcaf13	100	72.135	ENSSSCG00000006048	DCAF13	100	72.135	Sus_scrofa
ENSDARG00000002267	dcaf13	95	75.118	ENSTGUG00000012152	DCAF13	100	75.118	Taeniopygia_guttata
ENSDARG00000002267	dcaf13	100	80.899	ENSTRUG00000007438	dcaf13	100	80.899	Takifugu_rubripes
ENSDARG00000002267	dcaf13	94	80.907	ENSTNIG00000008215	dcaf13	85	80.907	Tetraodon_nigroviridis
ENSDARG00000002267	dcaf13	51	73.451	ENSTBEG00000015812	-	50	73.451	Tupaia_belangeri
ENSDARG00000002267	dcaf13	98	65.977	ENSTTRG00000014906	DCAF13	75	65.843	Tursiops_truncatus
ENSDARG00000002267	dcaf13	100	75.506	ENSUAMG00000017931	DCAF13	100	75.506	Ursus_americanus
ENSDARG00000002267	dcaf13	99	68.849	ENSUMAG00000019830	DCAF13	76	68.849	Ursus_maritimus
ENSDARG00000002267	dcaf13	100	74.157	ENSVPAG00000006725	DCAF13	76	74.157	Vicugna_pacos
ENSDARG00000002267	dcaf13	94	75.779	ENSVVUG00000016884	DCAF13	89	75.779	Vulpes_vulpes
ENSDARG00000002267	dcaf13	82	77.198	ENSXETG00000004092	dcaf13	100	77.198	Xenopus_tropicalis
ENSDARG00000002267	dcaf13	100	74.382	ENSXCOG00000017005	dcaf13	100	74.382	Xiphophorus_couchianus
ENSDARG00000002267	dcaf13	100	79.551	ENSXMAG00000026809	dcaf13	100	79.551	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0000462	maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)	21873635.	IBA	Process
GO:0003674	molecular_function	-	ND	Function
GO:0005634	nucleus	-	IEA	Component
GO:0005730	nucleolus	21873635.	IBA	Component
GO:0006364	rRNA processing	-	IEA	Process
GO:0016567	protein ubiquitination	-	IEA	Process
GO:0032040	small-subunit processome	21873635.	IBA	Component
GO:0042254	ribosome biogenesis	-	IEA	Process
GO:0080008	Cul4-RING E3 ubiquitin ligase complex	21873635.	IBA	Component
GO:0080008	Cul4-RING E3 ubiquitin ligase complex	-	ISS	Component