EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Gene Ontology

Description

Ensembl ID: ENSDARG00000004696 (Gene tree)
Gene ID: 641497
Gene Symbol: eefsec
Alias: zgc:123265
Full Name: eukaryotic elongation factor%2C selenocysteine-tRNA-specific
Gene Type: protein_coding
Species: Danio_rerio
Status: putative
Strand: Minus strand
Length: 9659 bases
Position: chr6:40822587-40832245
Accession: ZDB-GENE-051120-72
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSDARP00000022826	GTP_EFTU	PF00009.27	1.3e-27	1	1
ENSDARP00000022826	MMR_HSR1	PF01926.23	4.6e-06	1	1
ENSDARP00000022826	GTP_EFTU_D2	PF03144.25	5.7e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSDART00000007783	-	2093	-	ENSDARP00000022826	576 (aa)	-	F1R2J6

Gene Model

Click here to download ENSDARG00000004696's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSDARG00000004696's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSDARG00000004696	eefsec	99	63.228	ENSG00000132394	EEFSEC	99	63.062	Homo_sapiens
ENSDARG00000004696	eefsec	99	77.098	ENSAPOG00000015931	eefsec	98	77.098	Acanthochromis_polyacanthus
ENSDARG00000004696	eefsec	80	61.123	ENSAMEG00000015165	EEFSEC	87	65.000	Ailuropoda_melanoleuca
ENSDARG00000004696	eefsec	63	84.861	ENSACIG00000022407	eefsec	99	84.861	Amphilophus_citrinellus
ENSDARG00000004696	eefsec	99	77.622	ENSAOCG00000008603	eefsec	98	76.748	Amphiprion_ocellaris
ENSDARG00000004696	eefsec	99	77.257	ENSAPEG00000017090	eefsec	98	76.389	Amphiprion_percula
ENSDARG00000004696	eefsec	99	76.817	ENSATEG00000002753	eefsec	99	76.910	Anabas_testudineus
ENSDARG00000004696	eefsec	73	67.667	ENSAPLG00000006745	EEFSEC	99	67.667	Anas_platyrhynchos
ENSDARG00000004696	eefsec	99	62.562	ENSANAG00000032691	EEFSEC	99	62.230	Aotus_nancymaae
ENSDARG00000004696	eefsec	99	76.430	ENSACLG00000024565	eefsec	98	85.259	Astatotilapia_calliptera
ENSDARG00000004696	eefsec	99	85.340	ENSAMXG00000002260	eefsec	98	85.340	Astyanax_mexicanus
ENSDARG00000004696	eefsec	99	63.805	ENSBTAG00000030962	EEFSEC	99	71.654	Bos_taurus
ENSDARG00000004696	eefsec	88	32.950	WBGene00008133	efsc-1	94	32.897	Caenorhabditis_elegans
ENSDARG00000004696	eefsec	99	62.396	ENSCJAG00000005387	EEFSEC	99	62.063	Callithrix_jacchus
ENSDARG00000004696	eefsec	99	63.471	ENSCAFG00000004135	EEFSEC	80	63.158	Canis_familiaris
ENSDARG00000004696	eefsec	99	63.471	ENSCAFG00020004811	EEFSEC	99	63.158	Canis_lupus_dingo
ENSDARG00000004696	eefsec	99	63.682	ENSCHIG00000021838	EEFSEC	99	63.345	Capra_hircus
ENSDARG00000004696	eefsec	99	63.062	ENSTSYG00000012922	EEFSEC	99	62.729	Carlito_syrichta
ENSDARG00000004696	eefsec	83	57.715	ENSCAPG00000000084	EEFSEC	98	57.315	Cavia_aperea
ENSDARG00000004696	eefsec	99	63.452	ENSCPOG00000024352	EEFSEC	92	71.888	Cavia_porcellus
ENSDARG00000004696	eefsec	99	62.729	ENSCCAG00000031336	EEFSEC	99	62.396	Cebus_capucinus
ENSDARG00000004696	eefsec	99	62.729	ENSCATG00000019414	EEFSEC	99	62.562	Cercocebus_atys
ENSDARG00000004696	eefsec	99	63.390	ENSCLAG00000006973	EEFSEC	92	72.289	Chinchilla_lanigera
ENSDARG00000004696	eefsec	99	62.729	ENSCSAG00000008599	EEFSEC	99	62.562	Chlorocebus_sabaeus
ENSDARG00000004696	eefsec	99	66.838	ENSCPBG00000014356	EEFSEC	88	66.838	Chrysemys_picta_bellii
ENSDARG00000004696	eefsec	99	57.216	ENSCSAVG00000002208	-	100	58.725	Ciona_savignyi
ENSDARG00000004696	eefsec	99	62.895	ENSCANG00000031492	EEFSEC	99	62.833	Colobus_angolensis_palliatus
ENSDARG00000004696	eefsec	99	64.020	ENSCGRG00001018089	Eefsec	99	63.851	Cricetulus_griseus_chok1gshd
ENSDARG00000004696	eefsec	99	63.837	ENSCGRG00000010063	Eefsec	91	72.874	Cricetulus_griseus_crigri
ENSDARG00000004696	eefsec	99	76.471	ENSCSEG00000003008	eefsec	99	85.259	Cynoglossus_semilaevis
ENSDARG00000004696	eefsec	99	76.132	ENSCVAG00000005381	eefsec	98	76.132	Cyprinodon_variegatus
ENSDARG00000004696	eefsec	99	62.901	ENSDNOG00000008925	EEFSEC	99	63.744	Dasypus_novemcinctus
ENSDARG00000004696	eefsec	83	51.919	ENSDORG00000000264	Eefsec	85	71.429	Dipodomys_ordii
ENSDARG00000004696	eefsec	90	49.130	FBgn0034627	eEFSec	95	49.130	Drosophila_melanogaster
ENSDARG00000004696	eefsec	99	56.376	ENSETEG00000007406	EEFSEC	99	56.208	Echinops_telfairi
ENSDARG00000004696	eefsec	72	74.757	ENSEBUG00000015029	eefsec	94	51.132	Eptatretus_burgeri
ENSDARG00000004696	eefsec	99	63.350	ENSEASG00005006786	EEFSEC	99	63.333	Equus_asinus_asinus
ENSDARG00000004696	eefsec	99	63.350	ENSECAG00000016565	EEFSEC	99	63.333	Equus_caballus
ENSDARG00000004696	eefsec	99	73.657	ENSELUG00000016632	eefsec	98	73.657	Esox_lucius
ENSDARG00000004696	eefsec	99	63.184	ENSFCAG00000006153	EEFSEC	99	63.184	Felis_catus
ENSDARG00000004696	eefsec	83	67.006	ENSFALG00000007901	EEFSEC	99	67.006	Ficedula_albicollis
ENSDARG00000004696	eefsec	83	62.450	ENSFDAG00000010243	EEFSEC	99	62.048	Fukomys_damarensis
ENSDARG00000004696	eefsec	99	77.217	ENSFHEG00000007155	eefsec	99	77.217	Fundulus_heteroclitus
ENSDARG00000004696	eefsec	99	71.979	ENSGMOG00000007705	eefsec	98	72.680	Gadus_morhua
ENSDARG00000004696	eefsec	99	67.637	ENSGALG00000038684	EEFSEC	99	67.637	Gallus_gallus
ENSDARG00000004696	eefsec	100	75.300	ENSGAFG00000021692	eefsec	100	75.643	Gambusia_affinis
ENSDARG00000004696	eefsec	99	77.448	ENSGACG00000000793	eefsec	99	76.910	Gasterosteus_aculeatus
ENSDARG00000004696	eefsec	99	66.667	ENSGAGG00000002059	EEFSEC	98	66.667	Gopherus_agassizii
ENSDARG00000004696	eefsec	87	62.813	ENSGGOG00000001445	EEFSEC	98	62.620	Gorilla_gorilla
ENSDARG00000004696	eefsec	99	77.448	ENSHBUG00000008917	eefsec	97	78.682	Haplochromis_burtoni
ENSDARG00000004696	eefsec	99	63.621	ENSHGLG00000000094	EEFSEC	99	71.333	Heterocephalus_glaber_female
ENSDARG00000004696	eefsec	99	63.435	ENSHGLG00100011393	EEFSEC	94	63.095	Heterocephalus_glaber_male
ENSDARG00000004696	eefsec	99	74.099	ENSHCOG00000004193	eefsec	99	74.266	Hippocampus_comes
ENSDARG00000004696	eefsec	99	84.991	ENSIPUG00000017291	eefsec	98	85.380	Ictalurus_punctatus
ENSDARG00000004696	eefsec	83	61.818	ENSSTOG00000019802	EEFSEC	99	61.414	Ictidomys_tridecemlineatus
ENSDARG00000004696	eefsec	99	76.748	ENSKMAG00000019907	eefsec	98	76.748	Kryptolebias_marmoratus
ENSDARG00000004696	eefsec	99	77.875	ENSLBEG00000017908	eefsec	98	77.875	Labrus_bergylta
ENSDARG00000004696	eefsec	86	69.109	ENSLACG00000013137	EEFSEC	96	68.515	Latimeria_chalumnae
ENSDARG00000004696	eefsec	99	74.132	ENSLOCG00000014535	eefsec	99	74.653	Lepisosteus_oculatus
ENSDARG00000004696	eefsec	99	61.356	ENSLAFG00000001997	EEFSEC	99	61.591	Loxodonta_africana
ENSDARG00000004696	eefsec	99	62.895	ENSMFAG00000042128	EEFSEC	99	62.729	Macaca_fascicularis
ENSDARG00000004696	eefsec	82	60.772	ENSMMUG00000018663	EEFSEC	99	60.569	Macaca_mulatta
ENSDARG00000004696	eefsec	99	62.895	ENSMNEG00000028574	EEFSEC	99	62.729	Macaca_nemestrina
ENSDARG00000004696	eefsec	84	61.034	ENSMLEG00000041771	EEFSEC	93	60.835	Mandrillus_leucophaeus
ENSDARG00000004696	eefsec	99	76.603	ENSMAMG00000023964	eefsec	99	85.600	Mastacembelus_armatus
ENSDARG00000004696	eefsec	64	85.259	ENSMZEG00005009380	eefsec	98	85.259	Maylandia_zebra
ENSDARG00000004696	eefsec	66	64.975	ENSMGAG00000007243	EEFSEC	100	64.975	Meleagris_gallopavo
ENSDARG00000004696	eefsec	89	66.792	ENSMAUG00000011197	Eefsec	92	73.200	Mesocricetus_auratus
ENSDARG00000004696	eefsec	99	63.131	ENSMOCG00000017748	Eefsec	92	71.825	Microtus_ochrogaster
ENSDARG00000004696	eefsec	63	85.657	ENSMMOG00000021820	eefsec	98	85.657	Mola_mola
ENSDARG00000004696	eefsec	89	67.416	ENSMODG00000008034	EEFSEC	81	67.228	Monodelphis_domestica
ENSDARG00000004696	eefsec	98	76.977	ENSMALG00000016211	eefsec	98	78.558	Monopterus_albus
ENSDARG00000004696	eefsec	99	63.697	MGP_CAROLIEiJ_G0028627	Eefsec	98	69.565	Mus_caroli
ENSDARG00000004696	eefsec	99	63.529	ENSMUSG00000033216	Eefsec	98	69.170	Mus_musculus
ENSDARG00000004696	eefsec	99	63.529	MGP_PahariEiJ_G0022366	Eefsec	98	69.565	Mus_pahari
ENSDARG00000004696	eefsec	99	63.697	MGP_SPRETEiJ_G0029640	Eefsec	98	69.565	Mus_spretus
ENSDARG00000004696	eefsec	99	63.516	ENSMPUG00000017340	EEFSEC	95	63.184	Mustela_putorius_furo
ENSDARG00000004696	eefsec	84	61.753	ENSMLUG00000004261	EEFSEC	99	61.078	Myotis_lucifugus
ENSDARG00000004696	eefsec	99	76.950	ENSNBRG00000002387	eefsec	98	85.657	Neolamprologus_brichardi
ENSDARG00000004696	eefsec	99	62.729	ENSNLEG00000014303	EEFSEC	99	62.562	Nomascus_leucogenys
ENSDARG00000004696	eefsec	83	63.469	ENSMEUG00000005747	EEFSEC	99	62.986	Notamacropus_eugenii
ENSDARG00000004696	eefsec	99	63.300	ENSOPRG00000011276	EEFSEC	99	63.300	Ochotona_princeps
ENSDARG00000004696	eefsec	99	63.283	ENSODEG00000002928	EEFSEC	92	72.289	Octodon_degus
ENSDARG00000004696	eefsec	82	74.059	ENSONIG00000019038	eefsec	100	74.895	Oreochromis_niloticus
ENSDARG00000004696	eefsec	82	63.505	ENSOANG00000009108	EEFSEC	99	63.505	Ornithorhynchus_anatinus
ENSDARG00000004696	eefsec	99	63.300	ENSOCUG00000016517	EEFSEC	99	63.805	Oryctolagus_cuniculus
ENSDARG00000004696	eefsec	99	76.440	ENSORLG00000001377	eefsec	98	82.869	Oryzias_latipes
ENSDARG00000004696	eefsec	99	76.007	ENSORLG00020000729	eefsec	98	82.869	Oryzias_latipes_hni
ENSDARG00000004696	eefsec	99	76.440	ENSORLG00015001986	eefsec	98	76.440	Oryzias_latipes_hsok
ENSDARG00000004696	eefsec	83	72.557	ENSOMEG00000010071	eefsec	89	71.753	Oryzias_melastigma
ENSDARG00000004696	eefsec	74	64.253	ENSOGAG00000014084	EEFSEC	97	64.253	Otolemur_garnettii
ENSDARG00000004696	eefsec	64	62.565	ENSOARG00000004600	EEFSEC	100	62.565	Ovis_aries
ENSDARG00000004696	eefsec	99	63.228	ENSPPAG00000030936	EEFSEC	97	71.498	Pan_paniscus
ENSDARG00000004696	eefsec	99	63.742	ENSPPRG00000002846	EEFSEC	99	63.411	Panthera_pardus
ENSDARG00000004696	eefsec	85	61.822	ENSPTIG00000013855	EEFSEC	92	61.434	Panthera_tigris_altaica
ENSDARG00000004696	eefsec	99	63.228	ENSPTRG00000015353	EEFSEC	97	71.498	Pan_troglodytes
ENSDARG00000004696	eefsec	99	63.062	ENSPANG00000017041	EEFSEC	99	62.895	Papio_anubis
ENSDARG00000004696	eefsec	99	73.276	ENSPKIG00000005220	eefsec	98	82.677	Paramormyrops_kingsleyae
ENSDARG00000004696	eefsec	89	68.511	ENSPSIG00000015135	EEFSEC	97	68.511	Pelodiscus_sinensis
ENSDARG00000004696	eefsec	99	78.709	ENSPMGG00000020300	eefsec	99	78.709	Periophthalmus_magnuspinnatus
ENSDARG00000004696	eefsec	99	64.527	ENSPEMG00000013677	Eefsec	92	73.200	Peromyscus_maniculatus_bairdii
ENSDARG00000004696	eefsec	89	68.190	ENSPMAG00000006779	eefsec	98	68.053	Petromyzon_marinus
ENSDARG00000004696	eefsec	82	63.244	ENSPCIG00000020494	EEFSEC	99	63.374	Phascolarctos_cinereus
ENSDARG00000004696	eefsec	100	75.129	ENSPFOG00000003748	eefsec	100	75.129	Poecilia_formosa
ENSDARG00000004696	eefsec	99	75.784	ENSPLAG00000018012	eefsec	99	75.784	Poecilia_latipinna
ENSDARG00000004696	eefsec	100	75.300	ENSPMEG00000001202	eefsec	100	75.300	Poecilia_mexicana
ENSDARG00000004696	eefsec	100	74.957	ENSPREG00000012235	eefsec	100	74.957	Poecilia_reticulata
ENSDARG00000004696	eefsec	99	62.729	ENSPPYG00000013436	EEFSEC	99	62.562	Pongo_abelii
ENSDARG00000004696	eefsec	89	57.519	ENSPCAG00000005883	EEFSEC	99	57.519	Procavia_capensis
ENSDARG00000004696	eefsec	99	60.702	ENSPCOG00000023432	EEFSEC	99	60.702	Propithecus_coquereli
ENSDARG00000004696	eefsec	65	71.042	ENSPVAG00000007070	EEFSEC	64	71.042	Pteropus_vampyrus
ENSDARG00000004696	eefsec	99	76.256	ENSPNYG00000005726	eefsec	98	85.259	Pundamilia_nyererei
ENSDARG00000004696	eefsec	99	85.515	ENSPNAG00000016724	eefsec	99	85.515	Pygocentrus_nattereri
ENSDARG00000004696	eefsec	99	63.866	ENSRNOG00000012954	Eefsec	99	72.332	Rattus_norvegicus
ENSDARG00000004696	eefsec	99	62.895	ENSRBIG00000032635	EEFSEC	99	62.729	Rhinopithecus_bieti
ENSDARG00000004696	eefsec	82	60.772	ENSSBOG00000031478	EEFSEC	99	60.366	Saimiri_boliviensis_boliviensis
ENSDARG00000004696	eefsec	82	63.169	ENSSHAG00000014760	EEFSEC	99	63.169	Sarcophilus_harrisii
ENSDARG00000004696	eefsec	99	73.299	ENSSFOG00015021109	eefsec	98	73.469	Scleropages_formosus
ENSDARG00000004696	eefsec	99	76.215	ENSSMAG00000001454	eefsec	99	76.215	Scophthalmus_maximus
ENSDARG00000004696	eefsec	99	77.241	ENSSDUG00000007924	eefsec	99	84.362	Seriola_dumerili
ENSDARG00000004696	eefsec	97	77.113	ENSSLDG00000024985	eefsec	98	77.113	Seriola_lalandi_dorsalis
ENSDARG00000004696	eefsec	82	63.505	ENSSPUG00000004191	EEFSEC	100	63.918	Sphenodon_punctatus
ENSDARG00000004696	eefsec	99	76.298	ENSSPAG00000001320	eefsec	99	84.462	Stegastes_partitus
ENSDARG00000004696	eefsec	99	63.484	ENSSSCG00000011619	EEFSEC	99	72.332	Sus_scrofa
ENSDARG00000004696	eefsec	99	67.466	ENSTGUG00000007895	EEFSEC	99	67.466	Taeniopygia_guttata
ENSDARG00000004696	eefsec	99	77.700	ENSTRUG00000010327	eefsec	98	77.700	Takifugu_rubripes
ENSDARG00000004696	eefsec	99	76.736	ENSTNIG00000003225	eefsec	99	76.736	Tetraodon_nigroviridis
ENSDARG00000004696	eefsec	99	62.901	ENSTTRG00000000994	EEFSEC	99	62.901	Tursiops_truncatus
ENSDARG00000004696	eefsec	99	63.894	ENSUAMG00000017283	EEFSEC	99	63.561	Ursus_americanus
ENSDARG00000004696	eefsec	73	65.826	ENSVVUG00000018372	EEFSEC	90	65.826	Vulpes_vulpes
ENSDARG00000004696	eefsec	80	68.008	ENSXETG00000002066	eefsec	99	68.008	Xenopus_tropicalis
ENSDARG00000004696	eefsec	99	75.610	ENSXCOG00000019916	eefsec	99	75.610	Xiphophorus_couchianus
ENSDARG00000004696	eefsec	100	74.957	ENSXMAG00000001839	eefsec	100	74.957	Xiphophorus_maculatus

Gene Ontology

Go ID	Go_term	PubmedID	Evidence	Category
GO:0001514	selenocysteine incorporation	21873635.	IBA	Process
GO:0003746	translation elongation factor activity	21873635.	IBA	Function
GO:0003746	translation elongation factor activity	-	IEA	Function
GO:0003924	GTPase activity	-	IEA	Function
GO:0005525	GTP binding	-	IEA	Function
GO:0006412	translation	-	IEA	Process
GO:0006414	translational elongation	21873635.	IBA	Process
GO:0006414	translational elongation	-	IEA	Process